RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 PHACTR4Q8IZ21 702 aa5.17□□□□□ -1.58
CTDSPL2-211ENST00000561189 SRPK1Q96SB4 655 aaKnown RBP5.17□□□□□ -1.58
CTDSPL2-211ENST00000561189 SEMA6BQ9H3T3 888 aa5.17□□□□□ -1.58
CTDSPL2-211ENST00000561189 EHMT1Q9H9B1 1298 aa5.17□□□□□ -1.58
CTDSPL2-211ENST00000561189 GMIPQ9P107 970 aa5.17□□□□□ -1.58
CTDSPL2-211ENST00000561189 ADAM30Q9UKF2 790 aa5.17□□□□□ -1.58
CTDSPL2-211ENST00000561189 SMAD7O15105 426 aaKnown RBP5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 ZNF862O60290 1169 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 GRK4P32298 578 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 ETFBP38117 255 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 GIPRP48546 466 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 CLCQ05315 142 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 PTPN11Q06124 597 aaPredicted RBP5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 INPP5AQ14642 412 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 BMS1Q14692 1282 aaKnown RBP5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 ZC3H12AQ5D1E8 599 aaKnown RBP5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 RNF43Q68DV7 783 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 MPRIPQ6WCQ1 1025 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 HID1Q8IV36 788 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 FAM13CQ8NE31 585 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 TMEM40Q8WWA1 233 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 WNT10AQ9GZT5 417 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 ACSS3Q9H6R3 686 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 CWC22Q9HCG8 908 aaKnown RBP5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 CRIM1Q9NZV1 1036 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 STOML1Q9UBI4 398 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 REV1Q9UBZ9 1251 aa5.16□□□□□ -1.58
CTDSPL2-211ENST00000561189 CCDC85CA6NKD9 419 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 TMPRSS2O15393 492 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 DDAH1O94760 285 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 IGLV1-40P01703 118 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 NAT2P11245 290 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 BMP3P12645 472 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 FSTP19883 344 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 GUCY2CP25092 1073 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 ASPAP45381 313 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 RAB33AQ14088 237 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 CYFIP1Q7L576 1253 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 LSRQ86X29 649 aaPredicted RBP5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 C19orf47Q8N9M1 422 aaKnown RBP5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 RBBP8NLQ8NC74 664 aaPredicted RBP5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 RNF214Q8ND24 703 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 HNRNPLLQ8WVV9 542 aaKnown RBP5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 SHDQ96IW2 340 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 DHRS1Q96LJ7 313 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 DBNDD2Q9BQY9 259 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 C7orf69Q9H7B7 122 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 RNF112Q9ULX5 631 aa5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 POLR3KQ9Y2Y1 108 aaPredicted RBP5.15□□□□□ -1.59
CTDSPL2-211ENST00000561189 GFRA2O00451 464 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 MAP4P27816 1152 aaKnown RBP5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 RXRBP28702 533 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 GBP1P32455 592 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 RING1Q06587 406 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 NFIAQ12857 509 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 BBS9Q3SYG4 887 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 TAF7LQ5H9L4 462 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 PPM1JQ5JR12 505 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 SLC6A19Q695T7 634 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 SEZ6L2Q6UXD5 910 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 BEND4Q6ZU67 534 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 NLRC3Q7RTR2 1065 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 GIMAP7Q8NHV1 300 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 MKL1Q969V6 931 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 WDR89Q96FK6 387 aaPredicted RBP5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 ACTL7BQ9Y614 415 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 PRR36Q9H6K5 1346 aa5.14□□□□□ -1.59
CTDSPL2-211ENST00000561189 MEIS3P2A8K0S8 358 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 AGRPO00253 132 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 SMARCA5O60264 1052 aaPredicted RBP5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 HCLS1P14317 486 aaPredicted RBP5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 NCLP19338 710 aaKnown RBP5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 RAB6AP20340 208 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 CCNFP41002 786 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 MAP7Q14244 749 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 NCAPHQ15003 741 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 TMEM201Q5SNT2 666 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 ZBTB37Q5TC79 503 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 OVOS1Q6IE37 1185 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 LRP10Q7Z4F1 713 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 FANCD2OSQ96PS1 177 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 PHAXQ9H814 394 aaKnown RBP5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 PCOLCE2Q9UKZ9 415 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 CDK11AQ9UQ88 783 aaPredicted RBP5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 CORINQ9Y5Q5 1042 aa5.13□□□□□ -1.59
CTDSPL2-211ENST00000561189 HMGB1P09429 215 aaKnown RBP5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 DRD2P14416 443 aa5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 CASP7P55210 303 aa5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 TTLL4Q14679 1199 aa5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 SGO2Q562F6 1265 aa5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 ARSHQ5FYA8 562 aa5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 ZNF746Q6NUN9 644 aaPredicted RBP5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 CDPF1Q6NVV7 123 aa5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 PAOXQ6QHF9 649 aa5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 ZDHHC13Q8IUH4 622 aa5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 SMYD4Q8IYR2 804 aaPredicted RBP5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 TAB3Q8N5C8 712 aaPredicted RBP5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 TMEM87BQ96K49 555 aa5.12□□□□□ -1.59
CTDSPL2-211ENST00000561189 CCDC74BQ96LY2 380 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms