RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 HMGCRP04035 888 aa13.11□□□□□ -0.31
TPM1-227ENST00000560970 PLCG2P16885 1265 aa13.11□□□□□ -0.31
TPM1-227ENST00000560970 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
TPM1-227ENST00000560970 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
TPM1-227ENST00000560970 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
TPM1-227ENST00000560970 PRO3102Q9H379 93 aa13.11□□□□□ -0.31
TPM1-227ENST00000560970 CHMP4BQ9H444 224 aaKnown RBP13.11□□□□□ -0.31
TPM1-227ENST00000560970 AATFQ9NY61 560 aaKnown RBP eCLIP13.11□□□□□ -0.31
TPM1-227ENST00000560970 TLR7Q9NYK1 1049 aaKnown RBP13.11□□□□□ -0.31
TPM1-227ENST00000560970 BAZ2AQ9UIF9 1905 aaKnown RBP13.1□□□□□ -0.31
TPM1-227ENST00000560970 BAG3O95817 575 aa13.1□□□□□ -0.31
TPM1-227ENST00000560970 ASNSP08243 561 aa13.1□□□□□ -0.31
TPM1-227ENST00000560970 MTMR2Q13614 643 aa13.1□□□□□ -0.31
TPM1-227ENST00000560970 SH3D19Q5HYK7 790 aa13.1□□□□□ -0.31
TPM1-227ENST00000560970 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
TPM1-227ENST00000560970 DBNDD2Q9BQY9 259 aa13.1□□□□□ -0.31
TPM1-227ENST00000560970 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
TPM1-227ENST00000560970 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
TPM1-227ENST00000560970 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
TPM1-227ENST00000560970 GPR108Q9NPR9 543 aa13.1□□□□□ -0.31
TPM1-227ENST00000560970 PI4KBQ9UBF8 816 aa13.1□□□□□ -0.31
TPM1-227ENST00000560970 COL11A1P12107 1806 aaPredicted RBP13.1□□□□□ -0.31
TPM1-227ENST00000560970 A0A1W2PPC1 479 aa13.09□□□□□ -0.31
TPM1-227ENST00000560970 EVI5O60447 810 aa13.09□□□□□ -0.31
TPM1-227ENST00000560970 IRX3P78415 501 aaPredicted RBP13.09□□□□□ -0.31
TPM1-227ENST00000560970 RRP1BQ14684 758 aaKnown RBP13.09□□□□□ -0.31
TPM1-227ENST00000560970 SOCS4Q8WXH5 440 aa13.09□□□□□ -0.31
TPM1-227ENST00000560970 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
TPM1-227ENST00000560970 DNAJC18Q9H819 358 aa13.09□□□□□ -0.31
TPM1-227ENST00000560970 MORF4L1Q9UBU8 362 aa13.09□□□□□ -0.31
TPM1-227ENST00000560970 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
TPM1-227ENST00000560970 RLFQ13129 1914 aa13.09□□□□□ -0.31
TPM1-227ENST00000560970 IGSF3O75054 1194 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 HMMRO75330 724 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 TFRCP02786 760 aaKnown RBP13.08□□□□□ -0.32
TPM1-227ENST00000560970 CCDC158Q5M9N0 1113 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 ADGRA1Q86SQ6 560 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.32
TPM1-227ENST00000560970 ANKLE1Q8NAG6 615 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 RHPN1Q8TCX5 695 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 EAF2Q96CJ1 260 aaPredicted RBP13.08□□□□□ -0.32
TPM1-227ENST00000560970 WDR18Q9BV38 432 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
TPM1-227ENST00000560970 IL1RAPL2Q9NP60 686 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.32
TPM1-227ENST00000560970 SUPT16HQ9Y5B9 1047 aaKnown RBP13.08□□□□□ -0.32
TPM1-227ENST00000560970 PLXNA1Q9UIW2 1896 aa13.08□□□□□ -0.32
TPM1-227ENST00000560970 APBB1O00213 710 aa13.07□□□□□ -0.32
TPM1-227ENST00000560970 BACE1P56817 501 aa13.07□□□□□ -0.32
TPM1-227ENST00000560970 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
TPM1-227ENST00000560970 MAPKAPK5Q8IW41 473 aa13.07□□□□□ -0.32
TPM1-227ENST00000560970 DIS3LQ8TF46 1054 aaKnown RBP13.07□□□□□ -0.32
TPM1-227ENST00000560970 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
TPM1-227ENST00000560970 TRIB2Q92519 343 aa13.07□□□□□ -0.32
TPM1-227ENST00000560970 ZNF512BQ96KM6 892 aaPredicted RBP13.07□□□□□ -0.32
TPM1-227ENST00000560970 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
TPM1-227ENST00000560970 GINM1Q9NU53 330 aa13.07□□□□□ -0.32
TPM1-227ENST00000560970 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
TPM1-227ENST00000560970 COL6A3P12111 3177 aa13.06□□□□□ -0.32
TPM1-227ENST00000560970 CYP2E1P05181 493 aaPredicted RBP13.06□□□□□ -0.32
TPM1-227ENST00000560970 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
TPM1-227ENST00000560970 PPP4CP60510 307 aa13.06□□□□□ -0.32
TPM1-227ENST00000560970 HERVK_113P62684 666 aa13.06□□□□□ -0.32
TPM1-227ENST00000560970 METTL16Q86W50 562 aaKnown RBP13.06□□□□□ -0.32
TPM1-227ENST00000560970 ERC1Q8IUD2 1116 aa13.06□□□□□ -0.32
TPM1-227ENST00000560970 GTF3C2Q8WUA4 911 aaPredicted RBP13.06□□□□□ -0.32
TPM1-227ENST00000560970 PAWRQ96IZ0 340 aaKnown RBP13.06□□□□□ -0.32
TPM1-227ENST00000560970 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
TPM1-227ENST00000560970 RPTORQ8N122 1335 aa13.06□□□□□ -0.32
TPM1-227ENST00000560970 C19orf81C9J6K1 198 aa13.05□□□□□ -0.32
TPM1-227ENST00000560970 GDF11O95390 407 aa13.05□□□□□ -0.32
TPM1-227ENST00000560970 HOXA7P31268 230 aaPredicted RBP13.05□□□□□ -0.32
TPM1-227ENST00000560970 SHROOM1Q2M3G4 852 aaPredicted RBP13.05□□□□□ -0.32
TPM1-227ENST00000560970 HSP90AB4PQ58FF6 505 aa13.05□□□□□ -0.32
TPM1-227ENST00000560970 AACSQ86V21 672 aa13.05□□□□□ -0.32
TPM1-227ENST00000560970 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
TPM1-227ENST00000560970 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
TPM1-227ENST00000560970 KIF1BPQ96EK5 621 aa13.05□□□□□ -0.32
TPM1-227ENST00000560970 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
TPM1-227ENST00000560970 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
TPM1-227ENST00000560970 DNAH12Q6ZR08 3092 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 USP17L10C9JJH3 530 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
TPM1-227ENST00000560970 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
TPM1-227ENST00000560970 ZAP70P43403 619 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 JAG1P78504 1218 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 TRIM32Q13049 653 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 MAP3K21Q5TCX8 1036 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 C7orf61Q8IZ16 206 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 FEZ1Q99689 392 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 NUDT12Q9BQG2 462 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 TXNRD2Q9NNW7 524 aa13.04□□□□□ -0.32
TPM1-227ENST00000560970 PIH1D3Q9NQM4 214 aaKnown RBP13.04□□□□□ -0.32
TPM1-227ENST00000560970 SAP30BPQ9UHR5 308 aaKnown RBP13.04□□□□□ -0.32
TPM1-227ENST00000560970 GREB1LQ9C091 1923 aaPredicted RBP13.03□□□□□ -0.32
TPM1-227ENST00000560970 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
TPM1-227ENST00000560970 RAB11FIP3O75154 756 aa13.03□□□□□ -0.32
TPM1-227ENST00000560970 XRCC5P13010 732 aaKnown RBP13.03□□□□□ -0.32
TPM1-227ENST00000560970 MAPK4P31152 587 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms