RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 FAM196BA6NMK8 535 aa16.1■□□□□ 0.17
HMBOX1-213ENST00000560269 PRC1O43663 620 aa16.1■□□□□ 0.17
HMBOX1-213ENST00000560269 PRAMEF18Q5VWM3 479 aa16.1■□□□□ 0.17
HMBOX1-213ENST00000560269 DCAF15Q66K64 600 aa16.1■□□□□ 0.17
HMBOX1-213ENST00000560269 MIGA2Q7L4E1 593 aa16.1■□□□□ 0.17
HMBOX1-213ENST00000560269 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
HMBOX1-213ENST00000560269 CCDC17Q96LX7 622 aa16.1■□□□□ 0.17
HMBOX1-213ENST00000560269 TTC14Q96N46 770 aa16.1■□□□□ 0.17
HMBOX1-213ENST00000560269 GLIS2Q9BZE0 524 aaPredicted RBP16.1■□□□□ 0.17
HMBOX1-213ENST00000560269 TSPY2A6NKD2 308 aa16.09■□□□□ 0.17
HMBOX1-213ENST00000560269 PHF20L1A8MW92 1017 aa16.09■□□□□ 0.17
HMBOX1-213ENST00000560269 TFAP4Q01664 338 aa16.09■□□□□ 0.17
HMBOX1-213ENST00000560269 FAM47AQ5JRC9 791 aa16.09■□□□□ 0.17
HMBOX1-213ENST00000560269 NEDD1Q8NHV4 660 aa16.09■□□□□ 0.17
HMBOX1-213ENST00000560269 CDCA5Q96FF9 252 aa16.09■□□□□ 0.17
HMBOX1-213ENST00000560269 GPBP1L1Q9HC44 474 aaPredicted RBP16.09■□□□□ 0.17
HMBOX1-213ENST00000560269 PDRG1Q9NUG6 133 aa16.09■□□□□ 0.17
HMBOX1-213ENST00000560269 TCP11L1Q9NUJ3 509 aa16.09■□□□□ 0.17
HMBOX1-213ENST00000560269 TSPY3P0CV98 308 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 TSPY8P0CW00 308 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 AKR1B1P15121 316 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 RRP1BQ14684 758 aaKnown RBP16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 CERKLQ49MI3 558 aaPredicted RBP16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 MAP1SQ66K74 1059 aaPredicted RBP16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 DLK2Q6UY11 383 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 CHST3Q7LGC8 479 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 IQCA1Q86XH1 822 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 TMEM87BQ96K49 555 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 TCEANC2Q96MN5 208 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 ZNF341Q9BYN7 854 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 AGXT2Q9BYV1 514 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 ZNF112Q9UJU3 913 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 RBM19Q9Y4C8 960 aaKnown RBP16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 PAPPA2Q9BXP8 1791 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 ATAD5Q96QE3 1844 aa16.08■□□□□ 0.16
HMBOX1-213ENST00000560269 ST18O60284 1047 aa16.07■□□□□ 0.16
HMBOX1-213ENST00000560269 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
HMBOX1-213ENST00000560269 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
HMBOX1-213ENST00000560269 Q6ZUG5 572 aa16.07■□□□□ 0.16
HMBOX1-213ENST00000560269 IGDCC4Q8TDY8 1250 aa16.07■□□□□ 0.16
HMBOX1-213ENST00000560269 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.07■□□□□ 0.16
HMBOX1-213ENST00000560269 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 SH2B2O14492 632 aaPredicted RBP16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 KIF3CO14782 793 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 IFIT3O14879 490 aaKnown RBP16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 CAP2P40123 477 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 NOVP48745 357 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 AK2P54819 239 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 TOB2Q14106 344 aaPredicted RBP16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 SART3Q15020 963 aaKnown RBP16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 SEC23AQ15436 765 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 ABCB5Q2M3G0 1257 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 SNX21Q969T3 373 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 ZSCAN10Q96SZ4 725 aaPredicted RBP16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 ZKSCAN3Q9BRR0 538 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 UBAC1Q9BSL1 405 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 LRRC2Q9BYS8 371 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 IL17RBQ9NRM6 502 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
HMBOX1-213ENST00000560269 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 TNKSO95271 1327 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 USP2O75604 605 aaPredicted RBP16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 NF2P35240 595 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 LIFRP42702 1097 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 JAG1P78504 1218 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 ANKRD1Q15327 319 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 TMEM67Q5HYA8 995 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 DGKHQ86XP1 1220 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 ANKS1AQ92625 1134 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 KLRG1Q96E93 195 aa16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 GPHNQ9NQX3 736 aaPredicted RBP16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 ANGEL1Q9UNK9 670 aaKnown RBP16.05■□□□□ 0.16
HMBOX1-213ENST00000560269 ERICH2A1L162 156 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 PPP1R12BO60237 982 aaPredicted RBP16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 NMT2O60551 498 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 CTNND1O60716 968 aaKnown RBP16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 GDF11O95390 407 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 CD2BP2O95400 341 aaKnown RBP16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 YY1P25490 414 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 GUCY1A2P33402 732 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 MCM2P49736 904 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 EVCP57679 992 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 WTAPQ15007 396 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 MAP3K11Q16584 847 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 RCSD1Q6JBY9 416 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 SGMS1Q86VZ5 419 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 TMTC2Q8N394 836 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 BRF1Q92994 677 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 LY9Q9HBG7 655 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 CABP5Q9NP86 173 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 MTMR4Q9NYA4 1195 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 ZBTB21Q9ULJ3 1066 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 OTOFQ9HC10 1997 aa16.04■□□□□ 0.16
HMBOX1-213ENST00000560269 TRAF5O00463 557 aa16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 ITGBL1O95965 494 aaPredicted RBP16.03■□□□□ 0.16
HMBOX1-213ENST00000560269 GH2P01242 217 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms