RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 DBNLQ9UJU6 430 aaKnown RBP29.24■■■□□ 2.27
PBX1-217ENST00000559578 HMGCRP04035 888 aa29.23■■■□□ 2.27
PBX1-217ENST00000559578 MORF4L1Q9UBU8 362 aa29.23■■■□□ 2.27
PBX1-217ENST00000559578 USP17L10C9JJH3 530 aa29.22■■■□□ 2.27
PBX1-217ENST00000559578 GDF11O95390 407 aa29.22■■■□□ 2.27
PBX1-217ENST00000559578 HOXA7P31268 230 aaPredicted RBP29.22■■■□□ 2.27
PBX1-217ENST00000559578 CRISPLD2Q9H0B8 497 aa29.22■■■□□ 2.27
PBX1-217ENST00000559578 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.22■■■□□ 2.27
PBX1-217ENST00000559578 CCDC8Q9H0W5 538 aaPredicted RBP29.22■■■□□ 2.27
PBX1-217ENST00000559578 GJD2Q9UKL4 321 aa29.22■■■□□ 2.27
PBX1-217ENST00000559578 ZBTB7BO15156 539 aaPredicted RBP29.21■■■□□ 2.27
PBX1-217ENST00000559578 EVI5O60447 810 aa29.21■■■□□ 2.27
PBX1-217ENST00000559578 CYP7A1P22680 504 aa29.21■■■□□ 2.27
PBX1-217ENST00000559578 JAG1P78504 1218 aa29.21■■■□□ 2.27
PBX1-217ENST00000559578 CERS3Q8IU89 383 aa29.21■■■□□ 2.27
PBX1-217ENST00000559578 SAP30BPQ9UHR5 308 aaKnown RBP29.21■■■□□ 2.27
PBX1-217ENST00000559578 ZBTB21Q9ULJ3 1066 aa29.21■■■□□ 2.27
PBX1-217ENST00000559578 IDH1O75874 414 aaKnown RBP29.2■■■□□ 2.26
PBX1-217ENST00000559578 HNRNPUQ00839 825 aaKnown RBP eCLIP29.2■■■□□ 2.26
PBX1-217ENST00000559578 EAF2Q96CJ1 260 aaPredicted RBP29.2■■■□□ 2.26
PBX1-217ENST00000559578 P2RX7Q99572 595 aaKnown RBP29.2■■■□□ 2.26
PBX1-217ENST00000559578 TLR7Q9NYK1 1049 aaKnown RBP29.2■■■□□ 2.26
PBX1-217ENST00000559578 DYNLL1P63167 89 aaKnown RBP29.19■■■□□ 2.26
PBX1-217ENST00000559578 GPRC5AQ8NFJ5 357 aa29.19■■■□□ 2.26
PBX1-217ENST00000559578 HMX1Q9NP08 348 aaPredicted RBP29.19■■■□□ 2.26
PBX1-217ENST00000559578 HERVK_113P62684 666 aa29.18■■■□□ 2.26
PBX1-217ENST00000559578 NECAB2Q7Z6G3 386 aa29.18■■■□□ 2.26
PBX1-217ENST00000559578 PAWRQ96IZ0 340 aaKnown RBP29.18■■■□□ 2.26
PBX1-217ENST00000559578 MYH1P12882 1939 aa29.18■■■□□ 2.26
PBX1-217ENST00000559578 RPTORQ8N122 1335 aa29.18■■■□□ 2.26
PBX1-217ENST00000559578 RLBP1P12271 317 aa29.17■■■□□ 2.26
PBX1-217ENST00000559578 USP5P45974 858 aa29.17■■■□□ 2.26
PBX1-217ENST00000559578 SHROOM1Q2M3G4 852 aaPredicted RBP29.17■■■□□ 2.26
PBX1-217ENST00000559578 ANKLE1Q8NAG6 615 aa29.17■■■□□ 2.26
PBX1-217ENST00000559578 MAGEB6Q8N7X4 407 aa29.16■■■□□ 2.26
PBX1-217ENST00000559578 MIGA1Q8NAN2 632 aa29.16■■■□□ 2.26
PBX1-217ENST00000559578 GTF3C2Q8WUA4 911 aaPredicted RBP29.16■■■□□ 2.26
PBX1-217ENST00000559578 PRO3102Q9H379 93 aa29.16■■■□□ 2.26
PBX1-217ENST00000559578 MAP3K12Q12852 859 aa29.15■■■□□ 2.26
PBX1-217ENST00000559578 TMED8Q6PL24 325 aaPredicted RBP29.15■■■□□ 2.26
PBX1-217ENST00000559578 USP17L2Q6R6M4 530 aa29.15■■■□□ 2.26
PBX1-217ENST00000559578 ERC1Q8IUD2 1116 aa29.15■■■□□ 2.26
PBX1-217ENST00000559578 SOCS4Q8WXH5 440 aa29.15■■■□□ 2.26
PBX1-217ENST00000559578 NUDT12Q9BQG2 462 aa29.15■■■□□ 2.26
PBX1-217ENST00000559578 TXNRD2Q9NNW7 524 aa29.15■■■□□ 2.26
PBX1-217ENST00000559578 PLXNB2O15031 1838 aa29.15■■■□□ 2.26
PBX1-217ENST00000559578 CYP2B6P20813 491 aa29.14■■■□□ 2.26
PBX1-217ENST00000559578 MAPK4P31152 587 aa29.14■■■□□ 2.26
PBX1-217ENST00000559578 TRIM32Q13049 653 aa29.14■■■□□ 2.26
PBX1-217ENST00000559578 CEP85Q6P2H3 762 aa29.14■■■□□ 2.26
PBX1-217ENST00000559578 CCAR1Q8IX12 1150 aaKnown RBP29.14■■■□□ 2.26
PBX1-217ENST00000559578 TRIB2Q92519 343 aa29.14■■■□□ 2.26
PBX1-217ENST00000559578 EMILIN3Q9NT22 766 aa29.14■■■□□ 2.26
PBX1-217ENST00000559578 GH2P01242 217 aa29.13■■■□□ 2.25
PBX1-217ENST00000559578 PDE3AQ14432 1141 aa29.13■■■□□ 2.25
PBX1-217ENST00000559578 MIER1Q8N108 512 aa29.13■■■□□ 2.25
PBX1-217ENST00000559578 DIS3LQ8TF46 1054 aaKnown RBP29.13■■■□□ 2.25
PBX1-217ENST00000559578 RBPJLQ9UBG7 517 aa29.13■■■□□ 2.25
PBX1-217ENST00000559578 PEX10O60683 326 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 ERVK-9P63128 1117 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 ERVK-24P63145 666 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 TATDN1Q6P1N9 297 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 TTC6Q86TZ1 520 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 AACSQ86V21 672 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 FEZ1Q99689 392 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 EHD4Q9H223 541 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 SERPINB13Q9UIV8 391 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 NDUFB9Q9Y6M9 179 aa29.12■■■□□ 2.25
PBX1-217ENST00000559578 XRCC5P13010 732 aaKnown RBP29.11■■■□□ 2.25
PBX1-217ENST00000559578 TRMT44Q8IYL2 757 aaKnown RBP29.11■■■□□ 2.25
PBX1-217ENST00000559578 PAGR1Q9BTK6 254 aa29.11■■■□□ 2.25
PBX1-217ENST00000559578 NBPF3Q9H094 633 aa29.11■■■□□ 2.25
PBX1-217ENST00000559578 ANTXR1Q9H6X2 564 aa29.11■■■□□ 2.25
PBX1-217ENST00000559578 EXOC6BQ9Y2D4 811 aa29.11■■■□□ 2.25
PBX1-217ENST00000559578 A0A1W2PPC1 479 aa29.1■■■□□ 2.25
PBX1-217ENST00000559578 ALPK3Q96L96 1907 aa29.1■■■□□ 2.25
PBX1-217ENST00000559578 PRKAR2AP13861 404 aaKnown RBP29.09■■■□□ 2.25
PBX1-217ENST00000559578 Q3C1V9 767 aa29.09■■■□□ 2.25
PBX1-217ENST00000559578 C12orf42Q96LP6 360 aa29.09■■■□□ 2.25
PBX1-217ENST00000559578 ZKSCAN1P17029 563 aaPredicted RBP29.08■■■□□ 2.25
PBX1-217ENST00000559578 RGS2P41220 211 aa29.08■■■□□ 2.25
PBX1-217ENST00000559578 RAB3GAP1Q15042 981 aa29.08■■■□□ 2.25
PBX1-217ENST00000559578 ZYXQ15942 572 aaKnown RBP29.08■■■□□ 2.25
PBX1-217ENST00000559578 CERKLQ49MI3 558 aaPredicted RBP29.08■■■□□ 2.25
PBX1-217ENST00000559578 HSP90AB4PQ58FF6 505 aa29.08■■■□□ 2.25
PBX1-217ENST00000559578 MAP3K21Q5TCX8 1036 aa29.08■■■□□ 2.25
PBX1-217ENST00000559578 GPR142Q7Z601 462 aa29.08■■■□□ 2.25
PBX1-217ENST00000559578 CWC22Q9HCG8 908 aaKnown RBP29.08■■■□□ 2.25
PBX1-217ENST00000559578 RANBP2P49792 3224 aaKnown RBP29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP17L15C9J2P7 530 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP17L13C9JLJ4 530 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP17L11C9JVI0 530 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP17L18D6R9N7 530 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP17L22D6RA61 530 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP17L17D6RBQ6 530 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP17L19D6RCP7 530 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP17L20D6RJB6 530 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP14P54578 494 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 USP17L24Q0WX57 530 aa29.07■■■□□ 2.24
PBX1-217ENST00000559578 PORCNQ9H237 461 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms