RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 WASHC4Q2M389 1173 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 TTC39AQ5SRH9 613 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 STRIP1Q5VSL9 837 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 TXNRD3Q86VQ6 643 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 CACTIN-AS1Q8N1I8 211 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 ZGPATQ8N5A5 531 aaKnown RBP4.85□□□□□ -1.63
ZEB1-212ENST00000558655 KBTBD3Q8NAB2 608 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 WDR66Q8TBY9 1149 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 FAM163AQ96GL9 167 aaPredicted RBP4.85□□□□□ -1.63
ZEB1-212ENST00000558655 MYO3BQ8WXR4 1341 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 RAD50Q92878 1312 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 MYH8P13535 1937 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 CCDC189A1A4V9 331 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 WTIPA6NIX2 430 aaPredicted RBP4.85□□□□□ -1.63
ZEB1-212ENST00000558655 ZFYP08048 801 aaPredicted RBP4.85□□□□□ -1.63
ZEB1-212ENST00000558655 GYG1P46976 350 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 BCAMP50895 628 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 IGBP1P78318 339 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 ARHGEF6Q15052 776 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 WDR78Q5VTH9 848 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 POTEGQ6S5H5 508 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 OLFM4Q6UX06 510 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 ATL2Q8NHH9 583 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 CXorf38Q8TB03 319 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 KCNB2Q92953 911 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 NEUROD6Q96NK8 337 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 GMLQ99445 158 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 ZC3H12CQ9C0D7 883 aaKnown RBP4.85□□□□□ -1.63
ZEB1-212ENST00000558655 PAG1Q9NWQ8 432 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 ZNRF3Q9ULT6 936 aa4.85□□□□□ -1.63
ZEB1-212ENST00000558655 RPAP1Q9BWH6 1393 aaPredicted RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 TCRBV5S4A2TA0A5A2 114 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 RECKO95980 971 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 CYP2E1P05181 493 aaPredicted RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 VIL1P09327 827 aaKnown RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 SDSP20132 328 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 TAGLNQ01995 201 aaKnown RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 UBE3CQ15386 1083 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 LRRFIP1Q32MZ4 808 aaKnown RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 DACT2Q5SW24 774 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 CNTROBQ8N137 903 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 MTMR14Q8NCE2 650 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 GLMNQ92990 594 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 IL17RAQ96F46 866 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 LRFN3Q9BTN0 628 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 NRBP1Q9UHY1 535 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 PRR12Q9ULL5 1215 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 G3BP2Q9UN86 482 aaKnown RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 GREB1LQ9C091 1923 aaPredicted RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 GAKO14976 1311 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 YDJCA8MPS7 323 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 HMGB1P1B2RPK0 211 aaPredicted RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 C6orf229H3BNL8 230 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 SNAP23O00161 211 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 ECE2O60344 883 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 RPS12P25398 132 aaKnown RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 PPP4CP60510 307 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 SMYD5Q6GMV2 418 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 ZSCAN25Q6NSZ9 544 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 CASC1Q6TDU7 716 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 PIH1D3Q9NQM4 214 aaKnown RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 HACL1Q9UJ83 578 aa4.84□□□□□ -1.63
ZEB1-212ENST00000558655 TMA7Q9Y2S6 64 aaKnown RBP4.84□□□□□ -1.63
ZEB1-212ENST00000558655 MAST3O60307 1309 aa4.84□□□□□ -1.64
ZEB1-212ENST00000558655 ZMYM6O95789 1325 aa4.84□□□□□ -1.64
ZEB1-212ENST00000558655 BAZ2AQ9UIF9 1905 aaKnown RBP4.84□□□□□ -1.64
ZEB1-212ENST00000558655 USP17L3A6NCW0 530 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 USP17L4A6NCW7 530 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 GOLGA6CA6NDK9 693 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 GOLGA6BA6NDN3 693 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 SOBPA7XYQ1 873 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 PPIP5K2O43314 1243 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 CDC45O75419 566 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 EIF3JO75822 258 aaKnown RBP4.83□□□□□ -1.64
ZEB1-212ENST00000558655 GOLGA6DP0CG33 693 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 ADD2P35612 726 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 ZAP70P43403 619 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 PKN1Q16512 942 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 ZMYM1Q5SVZ6 1142 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 USP17L1Q7RTZ2 530 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 AGBL3Q8NEM8 1001 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 ZBED3Q96IU2 234 aaPredicted RBP4.83□□□□□ -1.64
ZEB1-212ENST00000558655 PCMTD1Q96MG8 357 aaPredicted RBP4.83□□□□□ -1.64
ZEB1-212ENST00000558655 ARHGEF10LQ9HCE6 1279 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 HELLSQ9NRZ9 838 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 GOLGA6AQ9NYA3 693 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 TLDC2A0PJX2 215 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 RNF113AO15541 343 aaKnown RBP4.83□□□□□ -1.64
ZEB1-212ENST00000558655 LIG1P18858 919 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 CHMLP26374 656 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 CLCN6P51797 869 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 ZNF280AP59817 542 aaPredicted RBP4.83□□□□□ -1.64
ZEB1-212ENST00000558655 AOC3Q16853 763 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 NIM1KQ8IY84 436 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 TSPAN18Q96SJ8 248 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.83□□□□□ -1.64
ZEB1-212ENST00000558655 BOLA2Q9H3K6 86 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 PIF1Q9H611 641 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 COMMD10Q9Y6G5 202 aa4.83□□□□□ -1.64
ZEB1-212ENST00000558655 CFAP69A5D8W1 941 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms