RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 FANCCQ00597 558 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 MLECQ14165 292 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 IFI16Q16666 785 aaKnown RBP5.71□□□□□ -1.5
SPG11-206ENST00000558093 SLC6A19Q695T7 634 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 LETMD1Q6P1Q0 360 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 FBXL19Q6PCT2 694 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 USP48Q86UV5 1035 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 KIAA0825Q8IV33 1275 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 TP53INP2Q8IXH6 220 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 MRPL41Q8IXM3 137 aaKnown RBP5.71□□□□□ -1.5
SPG11-206ENST00000558093 STK11IPQ8N1F8 1099 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 RGS22Q8NE09 1264 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 FAM13CQ8NE31 585 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 FBXO27Q8NI29 283 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 ZNF296Q8WUU4 475 aaPredicted RBP5.71□□□□□ -1.5
SPG11-206ENST00000558093 RNF34Q969K3 372 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 CCDC39Q9UFE4 941 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 MAPK8IP1Q9UQF2 711 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 SLC5A6Q9Y289 635 aa5.71□□□□□ -1.5
SPG11-206ENST00000558093 SCAMP3O14828 347 aaKnown RBP5.7□□□□□ -1.5
SPG11-206ENST00000558093 SLITRK5O94991 958 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 GARTP22102 1010 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 YARSP54577 528 aaKnown RBP5.7□□□□□ -1.5
SPG11-206ENST00000558093 GP2P55259 537 aaKnown RBP5.7□□□□□ -1.5
SPG11-206ENST00000558093 APOBRQ0VD83 1088 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 SFRP5Q5T4F7 317 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 ACSF2Q96CM8 615 aaPredicted RBP5.7□□□□□ -1.5
SPG11-206ENST00000558093 MISP3Q96FF7 219 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 FBXL18Q96ME1 805 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 SPON2Q9BUD6 331 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 MKNK2Q9HBH9 465 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 REV1Q9UBZ9 1251 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 ADAMTS1Q9UHI8 967 aa5.7□□□□□ -1.5
SPG11-206ENST00000558093 ROBO2Q9HCK4 1378 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 TMEM265A0A087WTH1 108 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 FAM155AB1AL88 458 aaPredicted RBP5.69□□□□□ -1.5
SPG11-206ENST00000558093 IGF2BP3O00425 579 aaKnown RBP eCLIP5.69□□□□□ -1.5
SPG11-206ENST00000558093 HTR3BO95264 441 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 EOMESO95936 686 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 PRNPP04156 253 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 CYP7A1P22680 504 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 VAMP1P23763 118 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 MCM4P33991 863 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 ETV3P41162 512 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 OXCT1P55809 520 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 CHMP4BP1P59074 171 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 MCATQ8IVS2 390 aaKnown RBP5.69□□□□□ -1.5
SPG11-206ENST00000558093 HRASLS5Q96KN8 279 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 HEXIM2Q96MH2 286 aaKnown RBP5.69□□□□□ -1.5
SPG11-206ENST00000558093 UBP1Q9NZI7 540 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 POLR3KQ9Y2Y1 108 aaPredicted RBP5.69□□□□□ -1.5
SPG11-206ENST00000558093 PCDHGB7Q9Y5F8 929 aa5.69□□□□□ -1.5
SPG11-206ENST00000558093 CBX7O95931 251 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 TNNI2P48788 182 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 SEZ6Q53EL9 994 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 ZNF394Q53GI3 561 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 LDLRAD1Q5T700 205 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 CDH24Q86UP0 819 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 PHACTR4Q8IZ21 702 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 MFSD4AQ8N468 514 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 LRRC3Q9BY71 257 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 BRMS1Q9HCU9 246 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 KCNQ5Q9NR82 932 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 PODXL2Q9NZ53 605 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 PCDHB14Q9Y5E9 798 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 U3KQE9 123 aa5.68□□□□□ -1.5
SPG11-206ENST00000558093 GREM1O60565 184 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 ADAMTS4O75173 837 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 CRKP46108 304 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 PRKCQQ04759 706 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 PLCL1Q15111 1095 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 AOC3Q16853 763 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 TMEM201Q5SNT2 666 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 GK5Q6ZS86 529 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 AGBL5Q8NDL9 886 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 CYB5D2Q8WUJ1 264 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 BCL7CQ8WUZ0 217 aaPredicted RBP5.67□□□□□ -1.5
SPG11-206ENST00000558093 NKD1Q969G9 470 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 COX4I2Q96KJ9 171 aa5.67□□□□□ -1.5
SPG11-206ENST00000558093 OAS3Q9Y6K5 1087 aaKnown RBP5.67□□□□□ -1.5
SPG11-206ENST00000558093 UPK3BL1B0FP48 263 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 UPK3BL2E5RIL1 263 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 IRAK1P51617 712 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 CLCN7P51798 805 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 BNIP3Q12983 259 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 CDKAL1Q5VV42 579 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 ZNF574Q6ZN55 896 aaPredicted RBP5.66□□□□□ -1.5
SPG11-206ENST00000558093 FAM214BQ7L5A3 538 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 SLFN12Q8IYM2 578 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 RIN3Q8TB24 985 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 VAV3Q9UKW4 847 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 PLAGL2Q9UPG8 496 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 PRR36Q9H6K5 1346 aa5.66□□□□□ -1.5
SPG11-206ENST00000558093 UNCXA6NJT0 531 aa5.65□□□□□ -1.5
SPG11-206ENST00000558093 PRR33A8MZF0 331 aa5.65□□□□□ -1.5
SPG11-206ENST00000558093 RAG1P15918 1043 aa5.65□□□□□ -1.5
SPG11-206ENST00000558093 ZNF165P49910 485 aa5.65□□□□□ -1.5
SPG11-206ENST00000558093 IKZF1Q13422 519 aa5.65□□□□□ -1.5
SPG11-206ENST00000558093 ANGEL2Q5VTE6 544 aaKnown RBP5.65□□□□□ -1.5
SPG11-206ENST00000558093 SPACA3Q8IXA5 215 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms