RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 CAP2P40123 477 aa8.53□□□□□ -1.04
GPHN-215ENST00000557654 CRKP46108 304 aa8.53□□□□□ -1.04
GPHN-215ENST00000557654 PDE4BQ07343 736 aa8.53□□□□□ -1.04
GPHN-215ENST00000557654 ARHGAP27Q6ZUM4 889 aa8.53□□□□□ -1.04
GPHN-215ENST00000557654 BSDC1Q9NW68 430 aaPredicted RBP8.53□□□□□ -1.04
GPHN-215ENST00000557654 PLAGL2Q9UPG8 496 aa8.53□□□□□ -1.04
GPHN-215ENST00000557654 PCDHGB7Q9Y5F8 929 aa8.53□□□□□ -1.04
GPHN-215ENST00000557654 WNT11O96014 354 aa8.52□□□□□ -1.05
GPHN-215ENST00000557654 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.05
GPHN-215ENST00000557654 BNIP3Q12983 259 aa8.52□□□□□ -1.05
GPHN-215ENST00000557654 MPP2Q14168 576 aa8.52□□□□□ -1.05
GPHN-215ENST00000557654 ZNF394Q53GI3 561 aa8.52□□□□□ -1.05
GPHN-215ENST00000557654 ZNF574Q6ZN55 896 aaPredicted RBP8.52□□□□□ -1.05
GPHN-215ENST00000557654 REC114Q7Z4M0 266 aa8.52□□□□□ -1.05
GPHN-215ENST00000557654 MRPL41Q8IXM3 137 aaKnown RBP8.52□□□□□ -1.05
GPHN-215ENST00000557654 NETO1Q8TDF5 533 aa8.52□□□□□ -1.05
GPHN-215ENST00000557654 KCNQ5Q9NR82 932 aa8.52□□□□□ -1.05
GPHN-215ENST00000557654 UBP1Q9NZI7 540 aa8.52□□□□□ -1.05
GPHN-215ENST00000557654 KIAA1522Q9P206 1035 aaPredicted RBP8.52□□□□□ -1.05
GPHN-215ENST00000557654 ANGEL1Q9UNK9 670 aaKnown RBP8.52□□□□□ -1.05
GPHN-215ENST00000557654 SUPT16HQ9Y5B9 1047 aaKnown RBP8.52□□□□□ -1.05
GPHN-215ENST00000557654 OAS3Q9Y6K5 1087 aaKnown RBP8.52□□□□□ -1.05
GPHN-215ENST00000557654 PRR33A8MZF0 331 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 GREM1O60565 184 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 PRNPP04156 253 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 CEACAM5P06731 702 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 CD96P40200 585 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 LETMD1Q6P1Q0 360 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 CDH24Q86UP0 819 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 MCATQ8IVS2 390 aaKnown RBP8.51□□□□□ -1.05
GPHN-215ENST00000557654 MFSD2AQ8NA29 543 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 BRMS1Q9HCU9 246 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 PRDM5Q9NQX1 630 aaPredicted RBP8.51□□□□□ -1.05
GPHN-215ENST00000557654 REV1Q9UBZ9 1251 aa8.51□□□□□ -1.05
GPHN-215ENST00000557654 TPX2Q9ULW0 747 aaKnown RBP8.51□□□□□ -1.05
GPHN-215ENST00000557654 CCDC9Q9Y3X0 531 aaKnown RBP8.51□□□□□ -1.05
GPHN-215ENST00000557654 DNAJA2O60884 412 aa8.5□□□□□ -1.05
GPHN-215ENST00000557654 HTR3BO95264 441 aa8.5□□□□□ -1.05
GPHN-215ENST00000557654 SLC6A19Q695T7 634 aa8.5□□□□□ -1.05
GPHN-215ENST00000557654 VSIG10LQ86VR7 867 aa8.5□□□□□ -1.05
GPHN-215ENST00000557654 WFDC3Q8IUB2 231 aa8.5□□□□□ -1.05
GPHN-215ENST00000557654 BCL7CQ8WUZ0 217 aaPredicted RBP8.5□□□□□ -1.05
GPHN-215ENST00000557654 GTF2IRD1Q9UHL9 959 aa8.5□□□□□ -1.05
GPHN-215ENST00000557654 ADAM30Q9UKF2 790 aa8.5□□□□□ -1.05
GPHN-215ENST00000557654 DIEXFQ68CQ4 756 aaKnown RBP8.49□□□□□ -1.05
GPHN-215ENST00000557654 SPRED2Q7Z698 418 aa8.49□□□□□ -1.05
GPHN-215ENST00000557654 USP48Q86UV5 1035 aa8.49□□□□□ -1.05
GPHN-215ENST00000557654 FAM13CQ8NE31 585 aa8.49□□□□□ -1.05
GPHN-215ENST00000557654 FLCNQ8NFG4 579 aa8.49□□□□□ -1.05
GPHN-215ENST00000557654 ZNF428Q96B54 188 aa8.49□□□□□ -1.05
GPHN-215ENST00000557654 KLHL3Q9UH77 587 aa8.49□□□□□ -1.05
GPHN-215ENST00000557654 CHURC1-FNTBB4DL54 471 aa8.48□□□□□ -1.05
GPHN-215ENST00000557654 IGF2BP3O00425 579 aaKnown RBP eCLIP8.48□□□□□ -1.05
GPHN-215ENST00000557654 VAMP1P23763 118 aa8.48□□□□□ -1.05
GPHN-215ENST00000557654 NKPD1Q17RQ9 610 aa8.48□□□□□ -1.05
GPHN-215ENST00000557654 CWF19L2Q2TBE0 894 aaKnown RBP8.48□□□□□ -1.05
GPHN-215ENST00000557654 SEZ6Q53EL9 994 aa8.48□□□□□ -1.05
GPHN-215ENST00000557654 RNF34Q969K3 372 aa8.48□□□□□ -1.05
GPHN-215ENST00000557654 EAF1Q96JC9 268 aaPredicted RBP8.48□□□□□ -1.05
GPHN-215ENST00000557654 LRRC3Q9BY71 257 aa8.48□□□□□ -1.05
GPHN-215ENST00000557654 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
GPHN-215ENST00000557654 PRR36Q9H6K5 1346 aa8.48□□□□□ -1.05
GPHN-215ENST00000557654 RACK1P63244 317 aaKnown RBP8.47□□□□□ -1.05
GPHN-215ENST00000557654 IFI16Q16666 785 aaKnown RBP8.47□□□□□ -1.05
GPHN-215ENST00000557654 TMEM201Q5SNT2 666 aa8.47□□□□□ -1.05
GPHN-215ENST00000557654 C9orf131Q5VYM1 1079 aa8.47□□□□□ -1.05
GPHN-215ENST00000557654 SPACA3Q8IXA5 215 aa8.47□□□□□ -1.05
GPHN-215ENST00000557654 TP53INP2Q8IXH6 220 aa8.47□□□□□ -1.05
GPHN-215ENST00000557654 ABI1Q8IZP0 508 aa8.47□□□□□ -1.05
GPHN-215ENST00000557654 SPON2Q9BUD6 331 aa8.47□□□□□ -1.05
GPHN-215ENST00000557654 MKNK2Q9HBH9 465 aa8.47□□□□□ -1.05
GPHN-215ENST00000557654 PAK6Q9NQU5 681 aaPredicted RBP8.47□□□□□ -1.05
GPHN-215ENST00000557654 SLC5A6Q9Y289 635 aa8.47□□□□□ -1.05
GPHN-215ENST00000557654 PCDHB14Q9Y5E9 798 aa8.47□□□□□ -1.05
GPHN-215ENST00000557654 GNAT3A8MTJ3 354 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 SCAMP3O14828 347 aaKnown RBP8.46□□□□□ -1.06
GPHN-215ENST00000557654 CBX7O95931 251 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 APOBRQ0VD83 1088 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 AOC3Q16853 763 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 SFRP5Q5T4F7 317 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 KIAA0825Q8IV33 1275 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 DNAJB8Q8NHS0 232 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 PPP1R13LQ8WUF5 828 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 TNKS2Q9H2K2 1166 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 MAPK8IP1Q9UQF2 711 aa8.46□□□□□ -1.06
GPHN-215ENST00000557654 CD8BP10966 210 aa8.45□□□□□ -1.06
GPHN-215ENST00000557654 CLCQ05315 142 aa8.45□□□□□ -1.06
GPHN-215ENST00000557654 GK5Q6ZS86 529 aa8.45□□□□□ -1.06
GPHN-215ENST00000557654 METTL16Q86W50 562 aaKnown RBP8.45□□□□□ -1.06
GPHN-215ENST00000557654 HRASLS5Q96KN8 279 aa8.45□□□□□ -1.06
GPHN-215ENST00000557654 ROBO2Q9HCK4 1378 aa8.45□□□□□ -1.06
GPHN-215ENST00000557654 TMEM265A0A087WTH1 108 aa8.44□□□□□ -1.06
GPHN-215ENST00000557654 MCM4P33991 863 aa8.44□□□□□ -1.06
GPHN-215ENST00000557654 HDLBPQ00341 1268 aaKnown RBP8.44□□□□□ -1.06
GPHN-215ENST00000557654 CDKAL1Q5VV42 579 aa8.44□□□□□ -1.06
GPHN-215ENST00000557654 BAHD1Q8TBE0 780 aaPredicted RBP8.44□□□□□ -1.06
GPHN-215ENST00000557654 CAPN6Q9Y6Q1 641 aa8.44□□□□□ -1.06
GPHN-215ENST00000557654 YARSP54577 528 aaKnown RBP8.43□□□□□ -1.06
GPHN-215ENST00000557654 PRKCQQ04759 706 aa8.43□□□□□ -1.06
GPHN-215ENST00000557654 SLFN12Q8IYM2 578 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms