RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	FLT1	P17948	1338 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	MYH2	Q9UKX2	1941 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	GOLGA8A	A7E2F4	631 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	C21orf2	O43822	256 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	ECE2	O60344	883 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	RANBP6	O60518	1105 aa	Known RBP	11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	SLC3A2	P08195	630 aa	Known RBP	11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FAM173B	Q6P4H8	233 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	NBPF11	Q86T75	865 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FERMT3	Q86UX7	667 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	MAPKAPK5	Q8IW41	473 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TEX11	Q8IYF3	940 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	ZNF654	Q8IZM8	581 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TTLL6	Q8N841	843 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	SUPT20H	Q8NEM7	779 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	ANKS1A	Q92625	1134 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	DYNLL2	Q96FJ2	89 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	PRDM10	Q9NQV6	1147 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CREBZF	Q9NS37	354 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TTF2	Q9UNY4	1162 aa	Known RBP	11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	KIF3A	Q9Y496	699 aa		11.07	□□□□□ -0.64
HNRNPC-223	ENST00000556142	STK36	Q9NRP7	1315 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	ERICH2	A1L162	156 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FSD2	A1L4K1	749 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	YDJC	A8MPS7	323 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FOXN1	O15353	648 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	WDHD1	O75717	1129 aa	Predicted RBP	11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	IFNAR1	P17181	557 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	PDE4B	Q07343	736 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	MKRN4P	Q13434	485 aa	Predicted RBP	11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	AOC3	Q16853	763 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FAM47A	Q5JRC9	791 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	RCSD1	Q6JBY9	416 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	MICU3	Q86XE3	530 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FBXO18	Q8NFZ0	1043 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	PSMD1	Q99460	953 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	UBAC1	Q9BSL1	405 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	GZF1	Q9H116	711 aa	Predicted RBP	11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	IL17RB	Q9NRM6	502 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TCP11L1	Q9NUJ3	509 aa		11.06	□□□□□ -0.64
HNRNPC-223	ENST00000556142	USP17L3	A6NCW0	530 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	USP17L4	A6NCW7	530 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	POTEC	B2RU33	542 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142		F8W031	263 aa	Predicted RBP	11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142		H3BQV1	296 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CPLX1	O14810	134 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CDKL5	O76039	1030 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FMNL1	O95466	1100 aa	Predicted RBP	11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	MBD3	O95983	291 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	HDLBP	Q00341	1268 aa	Known RBP	11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FUT2	Q10981	343 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TROAP	Q12815	778 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CCDC93	Q567U6	631 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	DPY19L2	Q6NUT2	758 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	SYNE3	Q6ZMZ3	975 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	C16orf86	Q6ZW13	317 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	USP17L1	Q7RTZ2	530 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TTC6	Q86TZ1	520 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	IQCA1	Q86XH1	822 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CCDC144CP	Q8IYA2	1237 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FANCB	Q8NB91	859 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FBXW7	Q969H0	707 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	DDX4	Q9NQI0	724 aa	Known RBP	11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	SAP30BP	Q9UHR5	308 aa	Known RBP	11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142	ELP1	O95163	1332 aa		11.05	□□□□□ -0.64
HNRNPC-223	ENST00000556142		G3V3G9	751 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	NMT2	O60551	498 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	POLR3D	P05423	398 aa	Predicted RBP	11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	RASA1	P20936	1047 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CRK	P46108	304 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	NOV	P48745	357 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	KRT85	P78386	507 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	GABPA	Q06546	454 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	PPP2R5B	Q15173	497 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	RTN1	Q16799	776 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	IFIT1B	Q5T764	474 aa	Known RBP	11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	DCAF8	Q5TAQ9	597 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	OTUD7B	Q6GQQ9	843 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CDC42EP5	Q6NZY7	148 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	RTKN2	Q8IZC4	609 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	PIP4P2	Q8N4L2	257 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	PHKB	Q93100	1093 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	ZDHHC15	Q96MV8	337 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	AIFM3	Q96NN9	605 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	GJB4	Q9NTQ9	266 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TMEM63C	Q9P1W3	806 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	RBM27	Q9P2N5	1060 aa	Known RBP	11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	NAV1	Q8NEY1	1877 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CDK5RAP2	Q96SN8	1893 aa		11.04	□□□□□ -0.64
HNRNPC-223	ENST00000556142	UBE2Q2L	H0YL09	131 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FIBP	O43427	364 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	IARS	P41252	1262 aa	Known RBP	11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	CDK8	P49336	464 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	SCNN1D	P51172	638 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	FOSB	P53539	338 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	ZNF445	P59923	1031 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	UBE2H	P62256	183 aa		11.03	□□□□□ -0.64
HNRNPC-223	ENST00000556142	TFAP4	Q01664	338 aa		11.03	□□□□□ -0.64

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