RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 USP11P51784 963 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 EIF6P56537 245 aaKnown RBP5.27□□□□□ -1.57
SRP54-209ENST00000555746 RBL2Q08999 1139 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 MAP7Q14244 749 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 SLBPQ14493 270 aaKnown RBP eCLIP5.27□□□□□ -1.57
SRP54-209ENST00000555746 CDCP2Q5VXM1 449 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 UBE3DQ7Z6J8 389 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 SLFN12Q8IYM2 578 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 TMEM151AQ8N4L1 468 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 TAB3Q8N5C8 712 aaPredicted RBP5.27□□□□□ -1.57
SRP54-209ENST00000555746 FBLIM1Q8WUP2 373 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 TMEM40Q8WWA1 233 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 UBXN4Q92575 508 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 TMEM87BQ96K49 555 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 PSMG3-AS1Q96PY0 264 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 GMIPQ9P107 970 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 MYO15BQ96JP2 1530 aa5.27□□□□□ -1.57
SRP54-209ENST00000555746 TNFRSF10CO14798 259 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 DHX15O43143 795 aaKnown RBP5.26□□□□□ -1.57
SRP54-209ENST00000555746 RNGTTO60942 597 aaKnown RBP5.26□□□□□ -1.57
SRP54-209ENST00000555746 LRIG2O94898 1065 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 RAB6AP20340 208 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 NKG7Q16617 165 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 INTS3Q68E01 1043 aaKnown RBP5.26□□□□□ -1.57
SRP54-209ENST00000555746 CCDC81Q6ZN84 652 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 CDC37L1Q7L3B6 337 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 LSRQ86X29 649 aaPredicted RBP5.26□□□□□ -1.57
SRP54-209ENST00000555746 CLEC10AQ8IUN9 316 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 CPLX3Q8WVH0 158 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 TM9SF2Q99805 663 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 CNNM2Q9H8M5 875 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 ZNF408Q9H9D4 720 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 NESP48681 1621 aa5.26□□□□□ -1.57
SRP54-209ENST00000555746 FAM95CA0A1B0GW59 222 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 CST3P01034 146 aaPredicted RBP5.25□□□□□ -1.57
SRP54-209ENST00000555746 NFICP08651 508 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 NME1P15531 152 aaKnown RBP5.25□□□□□ -1.57
SRP54-209ENST00000555746 YARSP54577 528 aaKnown RBP5.25□□□□□ -1.57
SRP54-209ENST00000555746 OVOS1Q6IE37 1185 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.25□□□□□ -1.57
SRP54-209ENST00000555746 C19orf47Q8N9M1 422 aaKnown RBP5.25□□□□□ -1.57
SRP54-209ENST00000555746 MFSD2AQ8NA29 543 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 ATG4CQ96DT6 458 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 CRBNQ96SW2 442 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 FAM83CQ9BQN1 747 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 FOXQ1Q9C009 403 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 ANTXR1Q9H6X2 564 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 PRKAG3Q9UGI9 489 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 RAXQ9Y2V3 346 aa5.25□□□□□ -1.57
SRP54-209ENST00000555746 UPK3BL1B0FP48 263 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 CHURC1-FNTBB4DL54 471 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 UPK3BL2E5RIL1 263 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 STK10O94804 968 aaKnown RBP5.24□□□□□ -1.57
SRP54-209ENST00000555746 ETFBP38117 255 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 CASP7P55210 303 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 TNNI3KQ59H18 835 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 FBXW10Q5XX13 1052 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 PAOXQ6QHF9 649 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 PRR23CQ6ZRP0 262 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 BEND4Q6ZU67 534 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 ARMCX6Q7L4S7 300 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 NLRC3Q7RTR2 1065 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 FAM169BQ8N8A8 192 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 FAM13CQ8NE31 585 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 TP53INP1Q96A56 240 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 HIRIP3Q9BW71 556 aaPredicted RBP5.24□□□□□ -1.57
SRP54-209ENST00000555746 SSU72Q9NP77 194 aaKnown RBP5.24□□□□□ -1.57
SRP54-209ENST00000555746 TPSG1Q9NRR2 321 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 C1GALT1Q9NS00 363 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 DAGLAQ9Y4D2 1042 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 ARAP1Q96P48 1450 aa5.24□□□□□ -1.57
SRP54-209ENST00000555746 DYNC1LI2O43237 492 aaPredicted RBP5.23□□□□□ -1.57
SRP54-209ENST00000555746 IGSF3O75054 1194 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 PROCP04070 461 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 H2AFB1P0C5Y9 115 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 H2AFB2P0C5Z0 115 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 GUCY2CP25092 1073 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 RXRBP28702 533 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 GTF2F1P35269 517 aaKnown RBP eCLIP5.23□□□□□ -1.57
SRP54-209ENST00000555746 CCNFP41002 786 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 ARSHQ5FYA8 562 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 NBPF6Q5VWK0 638 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 PRAMEF13Q5VWM6 474 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 CYB5D2Q8WUJ1 264 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 DHX38Q92620 1227 aaKnown RBP5.23□□□□□ -1.57
SRP54-209ENST00000555746 GATA6Q92908 595 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 ANAPC16Q96DE5 110 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 NBPF4Q96M43 638 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 KCNF1Q9H3M0 494 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 USP35Q9P2H5 1018 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 KLHL3Q9UH77 587 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 MRVI1Q9Y6F6 885 aa5.23□□□□□ -1.57
SRP54-209ENST00000555746 RGS13O14921 159 aa5.22□□□□□ -1.57
SRP54-209ENST00000555746 KLF4O43474 513 aa5.22□□□□□ -1.57
SRP54-209ENST00000555746 ACRP10323 421 aa5.22□□□□□ -1.57
SRP54-209ENST00000555746 RAG1P15918 1043 aa5.22□□□□□ -1.57
SRP54-209ENST00000555746 NFKBIBQ15653 356 aa5.22□□□□□ -1.57
SRP54-209ENST00000555746 SOGA3Q5TF21 947 aa5.22□□□□□ -1.57
SRP54-209ENST00000555746 CCDC74BQ96LY2 380 aa5.22□□□□□ -1.57
SRP54-209ENST00000555746 C7orf69Q9H7B7 122 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms