RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ENAHQ8N8S7 591 aaPredicted RBP8.01□□□□□ -1.13
LINC00517-202ENST00000554257 NEDD1Q8NHV4 660 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 RRAGCQ9HB90 399 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 TPCN1Q9ULQ1 816 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 FAM196BA6NMK8 535 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 USP2O75604 605 aaPredicted RBP8.01□□□□□ -1.13
LINC00517-202ENST00000554257 CUL4AQ13619 759 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 DPY19L2Q6NUT2 758 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 FOXP4Q8IVH2 680 aaPredicted RBP8.01□□□□□ -1.13
LINC00517-202ENST00000554257 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.01□□□□□ -1.13
LINC00517-202ENST00000554257 ZSWIM8A7E2V4 1837 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 ZNF236Q9UL36 1845 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 PLXNA1Q9UIW2 1896 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 IQCA1LA6NCM1 817 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 SNHG28P0DPA3 235 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 RBM5P52756 815 aaKnown RBP eCLIP8.01□□□□□ -1.13
LINC00517-202ENST00000554257 NCOA7Q8NI08 942 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 CNNM2Q9H8M5 875 aa8.01□□□□□ -1.13
LINC00517-202ENST00000554257 WDR81Q562E7 1941 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 ZNFX1Q9P2E3 1918 aaKnown RBP8□□□□□ -1.13
LINC00517-202ENST00000554257 LIFRP42702 1097 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 FMR1Q06787 632 aaKnown RBP eCLIP8□□□□□ -1.13
LINC00517-202ENST00000554257 FUT2Q10981 343 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 SLC4A8Q2Y0W8 1093 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 KIAA1755Q5JYT7 1200 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 RNF20Q5VTR2 975 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 MKL1Q969V6 931 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 KLRG1Q96E93 195 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 CSRNP1Q96S65 589 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 NOL10Q9BSC4 688 aaKnown RBP8□□□□□ -1.13
LINC00517-202ENST00000554257 UPF3BQ9BZI7 483 aaKnown RBP8□□□□□ -1.13
LINC00517-202ENST00000554257 FRMD4AQ9P2Q2 1039 aaPredicted RBP8□□□□□ -1.13
LINC00517-202ENST00000554257 PRDM1O75626 825 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 CTDNEP1O95476 244 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 MOGSQ13724 837 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 MFSD6Q6ZSS7 791 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 PNMA8AQ86V59 439 aaPredicted RBP8□□□□□ -1.13
LINC00517-202ENST00000554257 CDCA5Q96FF9 252 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 KRT23Q9C075 422 aa8□□□□□ -1.13
LINC00517-202ENST00000554257 MINDY4BA8MYZ0 360 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 KDM4AO75164 1064 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 APPP05067 770 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 HMGB1P09429 215 aaKnown RBP7.99□□□□□ -1.13
LINC00517-202ENST00000554257 RBM26Q5T8P6 1007 aaKnown RBP7.99□□□□□ -1.13
LINC00517-202ENST00000554257 Q6ZUG5 572 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 CHST3Q7LGC8 479 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 TTC6Q86TZ1 520 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 LDHDQ86WU2 507 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 SHISA4Q96DD7 197 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 TCEANC2Q96MN5 208 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 FZD1Q9UP38 647 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 MYH7BA7E2Y1 1941 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 PRC1O43663 620 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 LMOD1P29536 600 aaPredicted RBP7.99□□□□□ -1.13
LINC00517-202ENST00000554257 CAP2P40123 477 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 NTRK3Q16288 839 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 ME3Q16798 604 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 FAM47AQ5JRC9 791 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 CST9Q5W186 159 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 ZSCAN10Q96SZ4 725 aaPredicted RBP7.99□□□□□ -1.13
LINC00517-202ENST00000554257 MTMR4Q9NYA4 1195 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 SNCAIPQ9Y6H5 919 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 A0A1W2PRG0 241 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 VEGFAP15692 232 aaPredicted RBP7.99□□□□□ -1.13
LINC00517-202ENST00000554257 MCCP23508 829 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 TROAPQ12815 778 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 TNFAIP1Q13829 316 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 LDLRAD1Q5T700 205 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 PRAMEF18Q5VWM3 479 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.99□□□□□ -1.13
LINC00517-202ENST00000554257 RASGRP2Q7LDG7 609 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 NBPF11Q86T75 865 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 TMEM87BQ96K49 555 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 GLIS2Q9BZE0 524 aaPredicted RBP7.99□□□□□ -1.13
LINC00517-202ENST00000554257 RNF41Q9H4P4 317 aaPredicted RBP7.99□□□□□ -1.13
LINC00517-202ENST00000554257 VEZTQ9HBM0 779 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 SYNPO2Q9UMS6 1093 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 TNKSO95271 1327 aa7.99□□□□□ -1.13
LINC00517-202ENST00000554257 MYO1BO43795 1136 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 MCM5P33992 734 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 RCAN1P53805 252 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 CLEC10AQ8IUN9 316 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 CEP95Q96GE4 821 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 LRRC2Q9BYS8 371 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 POLR3DP05423 398 aaPredicted RBP7.98□□□□□ -1.13
LINC00517-202ENST00000554257 ZKSCAN1P17029 563 aaPredicted RBP7.98□□□□□ -1.13
LINC00517-202ENST00000554257 BLOC1S2Q6QNY1 142 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 TRAF5O00463 557 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 PFKFB2O60825 505 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 PSMA5P28066 241 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 PDIA3P30101 505 aaKnown RBP7.98□□□□□ -1.13
LINC00517-202ENST00000554257 GJA5P36382 358 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 TFAP4Q01664 338 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 PDE4BQ07343 736 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 POTEEQ6S8J3 1075 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 DGKHQ86XP1 1220 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 MAP3K14Q99558 947 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 PDRG1Q9NUG6 133 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 ZBTB21Q9ULJ3 1066 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms