RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 DDX20Q9UHI6 824 aaKnown RBP9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 HMGB1P1B2RPK0 211 aaPredicted RBP9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 BACH1O14867 736 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 SASH3O75995 380 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 LDHCP07864 332 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 SLC3A2P08195 630 aaKnown RBP9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 MAGEA10P43363 369 aaPredicted RBP9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 TEFQ10587 303 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 PHLDB2Q86SQ0 1253 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 CCDC13Q8IYE1 715 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 UACAQ9BZF9 1416 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 KDM1AO60341 852 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 SDSP20132 328 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 STX17P56962 302 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 BNIP1Q12981 228 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 NBPF14Q5TI25 921 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 NBPF15Q8N660 670 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 MGARPQ8TDB4 240 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 BORCS6Q96GS4 357 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 POTEFA5A3E0 1075 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 CAPN1P07384 714 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 BICDL1Q6ZP65 573 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 TTLL11Q8NHH1 800 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 HIC2Q96JB3 615 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 MPHOSPH8Q99549 860 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 TBC1D7Q9P0N9 293 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 MACROD2A1Z1Q3 448 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 ZPR1O75312 459 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 B3GALNT1O75752 331 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 EPS15P42566 896 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 UBLCP1Q8WVY7 318 aaPredicted RBP9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 HVCN1Q96D96 273 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 GIMAP4Q9NUV9 329 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 CARD8Q9Y2G2 431 aa9.99□□□□□ -0.81
GTF2A1-203ENST00000553612 UNCXA6NJT0 531 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 GOLGA8KD6RF30 607 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 PPP1R2P41236 205 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 ADKP55263 362 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 MAP3K9P80192 1104 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 PPP1R2P3Q6NXS1 205 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 GATAD2AQ86YP4 633 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 HACD3Q9P035 362 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 FBXO2Q9UK22 296 aaPredicted RBP9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 CHMP2AO43633 222 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 NOL3O60936 208 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 ANO5Q75V66 913 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 PRPF31Q8WWY3 499 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 L3MBTL1Q9Y468 752 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 WDR91A4D1P6 747 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 DIAPH1O60610 1272 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 PDE5AO76074 875 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 KIF5AQ12840 1032 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 KAZNQ674X7 775 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 RCSD1Q6JBY9 416 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 CTAGE1Q96RT6 745 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 CENPKQ9BS16 269 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 N6AMT1Q9Y5N5 214 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 BAG2O95816 211 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 PSMA5P28066 241 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 ZNF131P52739 623 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 RBM12BQ8IXT5 1001 aaKnown RBP9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 PLAAQ9Y263 795 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 GOLGA8IPA6NC78 632 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 BLOC1S2Q6QNY1 142 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 PEX5LQ8IYB4 626 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 CCDC82Q8N4S0 544 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 ARFGAP2Q8N6H7 521 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 ERLEC1Q96DZ1 483 aa9.98□□□□□ -0.81
GTF2A1-203ENST00000553612 ADCY3O60266 1144 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 ZNF202O95125 648 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 H2AFXP16104 143 aaPredicted RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 MARCKSP29966 332 aaPredicted RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 ACCSLQ4AC99 568 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 INTS8Q75QN2 995 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 SLF2Q8IX21 1173 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 RPGRQ92834 1020 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 HOOK2Q96ED9 719 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 PRDM2Q13029 1718 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 LCA5LO95447 670 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 ADAMTS2O95450 1211 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 KRT10P13645 584 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 TMOD1P28289 359 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 PAFAH1B1P43034 410 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 PSMC1P62191 440 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 API5Q9BZZ5 524 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 VCPKMTQ9H867 229 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 SCG2P13521 617 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 GUCY2DQ02846 1103 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 NUDCD3Q8IVD9 361 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 SCAND2PQ9GZW5 306 aaPredicted RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 GGT7Q9UJ14 662 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 NKTRP30414 1462 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 KRT7P08729 469 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 BZW1Q7L1Q6 419 aaKnown RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 SMC1BQ8NDV3 1235 aa9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 OTUD7AQ8TE49 926 aaPredicted RBP9.97□□□□□ -0.81
GTF2A1-203ENST00000553612 JAKMIP2Q96AA8 810 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms