RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SLFN12Q8IYM2 578 aa7.85□□□□□ -1.15
SYNE2-210ENST00000553455 ZNF507Q8TCN5 953 aa7.85□□□□□ -1.15
SYNE2-210ENST00000553455 SLC9A7Q96T83 725 aa7.85□□□□□ -1.15
SYNE2-210ENST00000553455 SNTG2Q9NY99 539 aa7.85□□□□□ -1.15
SYNE2-210ENST00000553455 NOS3P29474 1203 aa7.84□□□□□ -1.15
SYNE2-210ENST00000553455 CAP2P40123 477 aa7.84□□□□□ -1.15
SYNE2-210ENST00000553455 ASPAP45381 313 aa7.84□□□□□ -1.15
SYNE2-210ENST00000553455 NFE2L2Q16236 605 aa7.84□□□□□ -1.15
SYNE2-210ENST00000553455 PPP2R5EQ16537 467 aa7.84□□□□□ -1.15
SYNE2-210ENST00000553455 INTS3Q68E01 1043 aaKnown RBP7.84□□□□□ -1.15
SYNE2-210ENST00000553455 SLC6A19Q695T7 634 aa7.84□□□□□ -1.15
SYNE2-210ENST00000553455 ZNF746Q6NUN9 644 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-210ENST00000553455 UNC5AQ6ZN44 842 aa7.84□□□□□ -1.15
SYNE2-210ENST00000553455 FAM13CQ8NE31 585 aa7.84□□□□□ -1.15
SYNE2-210ENST00000553455 USP21Q9UK80 565 aa7.84□□□□□ -1.15
SYNE2-210ENST00000553455 LTBP3Q9NS15 1303 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 FAM221BA6H8Z2 402 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 U2SURPO15042 1029 aaKnown RBP7.83□□□□□ -1.16
SYNE2-210ENST00000553455 POLR2BP30876 1174 aaKnown RBP7.83□□□□□ -1.16
SYNE2-210ENST00000553455 MBTPS1Q14703 1052 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 LARP1BQ659C4 914 aaKnown RBP7.83□□□□□ -1.16
SYNE2-210ENST00000553455 WFDC12Q8WWY7 111 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 SCARF2Q96GP6 870 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-210ENST00000553455 FAM46AQ96IP4 442 aaKnown RBP7.83□□□□□ -1.16
SYNE2-210ENST00000553455 DEPDC7Q96QD5 511 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 UBL7Q96S82 380 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-210ENST00000553455 DPH2Q9BQC3 489 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-210ENST00000553455 ACSS3Q9H6R3 686 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 PIDD1Q9HB75 910 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 ST7Q9NRC1 585 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 MAPK8IP1Q9UQF2 711 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 TBX22Q9Y458 520 aa7.83□□□□□ -1.16
SYNE2-210ENST00000553455 B2RBV5 119 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 C9orf172C9J069 976 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 GLB1P16278 677 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 YARSP54577 528 aaKnown RBP7.82□□□□□ -1.16
SYNE2-210ENST00000553455 INSM1Q01101 510 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-210ENST00000553455 ADGRE1Q14246 886 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 FXNQ16595 210 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 PRAMEF13Q5VWM6 474 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 JAZF1Q86VZ6 243 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 SMYD4Q8IYR2 804 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-210ENST00000553455 FAM177A1Q8N128 213 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-210ENST00000553455 KCT2Q8NC54 265 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 NACC1Q96RE7 527 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 SRPK1Q96SB4 655 aaKnown RBP7.82□□□□□ -1.16
SYNE2-210ENST00000553455 CEP41Q9BYV8 373 aa7.82□□□□□ -1.16
SYNE2-210ENST00000553455 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-210ENST00000553455 RNGTTO60942 597 aaKnown RBP7.81□□□□□ -1.16
SYNE2-210ENST00000553455 GJB6O95452 261 aa7.81□□□□□ -1.16
SYNE2-210ENST00000553455 CST3P01034 146 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-210ENST00000553455 RAG1P15918 1043 aa7.81□□□□□ -1.16
SYNE2-210ENST00000553455 IREB2P48200 963 aaKnown RBP7.81□□□□□ -1.16
SYNE2-210ENST00000553455 NRG1Q02297 640 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-210ENST00000553455 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
SYNE2-210ENST00000553455 C6orf15Q6UXA7 325 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-210ENST00000553455 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-210ENST00000553455 LRP10Q7Z4F1 713 aa7.81□□□□□ -1.16
SYNE2-210ENST00000553455 MRFAP1L1Q96HT8 127 aa7.81□□□□□ -1.16
SYNE2-210ENST00000553455 CCDC113Q9H0I3 377 aa7.81□□□□□ -1.16
SYNE2-210ENST00000553455 CADPSQ9ULU8 1353 aa7.81□□□□□ -1.16
SYNE2-210ENST00000553455 FAM86C2PA6NEL3 165 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 UBOX5O94941 541 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 APBA3O96018 575 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 RAB6AP20340 208 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 MRM1Q6IN84 353 aaKnown RBP7.8□□□□□ -1.16
SYNE2-210ENST00000553455 CDC37L1Q7L3B6 337 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 NLGN1Q8N2Q7 840 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 MEGF10Q96KG7 1140 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 KIF2CQ99661 725 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 SEMA6CQ9H3T2 930 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 SLC12A7Q9Y666 1083 aa7.8□□□□□ -1.16
SYNE2-210ENST00000553455 TLDC2A0PJX2 215 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 CCDC85CA6NKD9 419 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 RGS13O14921 159 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 SGO2Q562F6 1265 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 ARMCX6Q7L4S7 300 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.79□□□□□ -1.16
SYNE2-210ENST00000553455 FAM178BQ8IXR5 827 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 DZIP1LQ8IYY4 767 aaKnown RBP7.79□□□□□ -1.16
SYNE2-210ENST00000553455 CYB5D2Q8WUJ1 264 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 KLHL6Q8WZ60 621 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 FOXQ1Q9C009 403 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 PCOLCE2Q9UKZ9 415 aa7.79□□□□□ -1.16
SYNE2-210ENST00000553455 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
SYNE2-210ENST00000553455 DYNC1LI2O43237 492 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-210ENST00000553455 SART1O43290 800 aaKnown RBP7.78□□□□□ -1.16
SYNE2-210ENST00000553455 GAS2O43903 313 aaKnown RBP7.78□□□□□ -1.16
SYNE2-210ENST00000553455 LRIG2O94898 1065 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 CCNFP41002 786 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 RASGRF1Q13972 1273 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 UVSSAQ2YD98 709 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 ALYREFQ86V81 257 aaKnown RBP7.78□□□□□ -1.16
SYNE2-210ENST00000553455 TMEM192Q8IY95 271 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 PHACTR4Q8IZ21 702 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 ARMC10Q8N2F6 343 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 BAHD1Q8TBE0 780 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-210ENST00000553455 PPP1R13LQ8WUF5 828 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 FBLIM1Q8WUP2 373 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 EZH1Q92800 747 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms