RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 INTS13Q9NVM9 706 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 POLR2DO15514 142 aaKnown RBP14.11□□□□□ -0.15
HDAC7-230ENST00000552960 GPAA1O43292 621 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 WWC2Q6AWC2 1192 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 GPR161Q8N6U8 529 aaKnown RBP14.11□□□□□ -0.15
HDAC7-230ENST00000552960 SLC26A6Q9BXS9 759 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 SAMSN1Q9NSI8 373 aaKnown RBP14.11□□□□□ -0.15
HDAC7-230ENST00000552960 IQSEC3Q9UPP2 1182 aaPredicted RBP14.11□□□□□ -0.15
HDAC7-230ENST00000552960 IDH1O75874 414 aaKnown RBP14.11□□□□□ -0.15
HDAC7-230ENST00000552960 TFRCP02786 760 aaKnown RBP14.11□□□□□ -0.15
HDAC7-230ENST00000552960 MB21D2Q8IYB1 491 aaPredicted RBP14.11□□□□□ -0.15
HDAC7-230ENST00000552960 GOLGA1Q92805 767 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 A0A0U1RQJ8 604 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 SOWAHDA6NJG2 315 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 IARSP41252 1262 aaKnown RBP14.1□□□□□ -0.15
HDAC7-230ENST00000552960 LONRF2Q1L5Z9 754 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 ATRIPQ8WXE1 791 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 ARHGEF1Q92888 912 aaKnown RBP14.1□□□□□ -0.15
HDAC7-230ENST00000552960 GPR108Q9NPR9 543 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 VPS18Q9P253 973 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 TUBE1Q9UJT0 475 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 PDE8BO95263 885 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 RHOXF2BP0C7M4 288 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 BMP6P22004 513 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 GRIN1Q05586 938 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 FMR1Q06787 632 aaKnown RBP eCLIP14.1□□□□□ -0.15
HDAC7-230ENST00000552960 RRP12Q5JTH9 1297 aaKnown RBP14.1□□□□□ -0.15
HDAC7-230ENST00000552960 SPECC1LQ69YQ0 1117 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 NKX2-3Q8TAU0 364 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 RHOXF2Q9BQY4 288 aa14.1□□□□□ -0.15
HDAC7-230ENST00000552960 TRIM66O15016 1216 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 COBLO75128 1261 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 TRIM37O94972 964 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 MAP3K9P80192 1104 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 CMTR1Q8N1G2 835 aaKnown RBP14.09□□□□□ -0.15
HDAC7-230ENST00000552960 AK7Q96M32 723 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 SUGCTQ9HAC7 445 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-230ENST00000552960 ADAM21Q9UKJ8 722 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 KCNJ14Q9UNX9 436 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 TAF1P21675 1872 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 RFX7Q2KHR2 1363 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 KIF4BQ2VIQ3 1234 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 SERTAD1Q9UHV2 236 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 MRFAP1Q9Y605 127 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 ABCC12Q96J65 1359 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 FAM196AQ6ZSG2 479 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 TMEM139Q8IV31 216 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 TC2NQ8N9U0 490 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 MRPL44Q9H9J2 332 aaKnown RBP14.09□□□□□ -0.15
HDAC7-230ENST00000552960 PDE11AQ9HCR9 933 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 RSPH14Q9UHP6 348 aa14.09□□□□□ -0.15
HDAC7-230ENST00000552960 FEZ2Q9UHY8 353 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-230ENST00000552960 TRPC5Q9UL62 973 aaPredicted RBP14.09□□□□□ -0.15
HDAC7-230ENST00000552960 ANGEL1Q9UNK9 670 aaKnown RBP14.09□□□□□ -0.15
HDAC7-230ENST00000552960 ANKRD36CQ5JPF3 1778 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 GOLGA8AA7E2F4 631 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 BTBD18B2RXH4 712 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 FOXP2O15409 715 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 CHMP4BP1P59074 171 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 CYB5R4Q7L1T6 521 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 BTAF1O14981 1849 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 LAMA4Q16363 1823 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 AFMP43652 599 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 ZNF569Q5MCW4 686 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 SLC9C2Q5TAH2 1124 aa14.08□□□□□ -0.16
HDAC7-230ENST00000552960 H3BQF6 201 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 ZBTB43O43298 467 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 STX10O60499 249 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 BCAMP50895 628 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 JAKMIP3Q5VZ66 844 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 PPFIBP1Q86W92 1011 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 CCDC102AQ96A19 550 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 FUT8Q9BYC5 575 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 LCMT1Q9UIC8 334 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 HOOK1Q9UJC3 728 aaKnown RBP14.07□□□□□ -0.16
HDAC7-230ENST00000552960 MAN1B1Q9UKM7 699 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 TEX33O43247 280 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 CDKL5O76039 1030 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 CASP1P29466 404 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 POSTNQ15063 836 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 PTPAQ15257 358 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 RESP18Q5W5W9 173 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
HDAC7-230ENST00000552960 CELF1Q92879 486 aaKnown RBP14.07□□□□□ -0.16
HDAC7-230ENST00000552960 ZKSCAN3Q9BRR0 538 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 PIH1D3Q9NQM4 214 aaKnown RBP14.07□□□□□ -0.16
HDAC7-230ENST00000552960 HPSEQ9Y251 543 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 AKAP2Q9Y2D5 859 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 THSD7AQ9UPZ6 1657 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 GOLGA6L9A6NEM1 432 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 CCDC175P0C221 793 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 TXLNAP40222 546 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 FAM193AP78312 1265 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 TMEM67Q5HYA8 995 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 APPBP2Q92624 585 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 RABGGTAQ92696 567 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 RAI14Q9P0K7 980 aa14.07□□□□□ -0.16
HDAC7-230ENST00000552960 PPP6R2O75170 966 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms