RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SH3D19Q5HYK7 790 aa15.82■□□□□ 0.12
NPAS3-209ENST00000551008 PARK7Q99497 189 aaKnown RBP15.82■□□□□ 0.12
NPAS3-209ENST00000551008 WDR18Q9BV38 432 aa15.82■□□□□ 0.12
NPAS3-209ENST00000551008 ZBTB21Q9ULJ3 1066 aa15.82■□□□□ 0.12
NPAS3-209ENST00000551008 MAGEB6P1A0A0J9YX57 407 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 SMIM22K7EJ46 135 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 USP5P45974 858 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
NPAS3-209ENST00000551008 GABPAQ06546 454 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 TSHZ3Q63HK5 1081 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 TATDN1Q6P1N9 297 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 CERS3Q8IU89 383 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 PROCA1Q8NCQ7 364 aaPredicted RBP15.81■□□□□ 0.12
NPAS3-209ENST00000551008 SDR42E1Q8WUS8 393 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 ZNF333Q96JL9 665 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 EHD4Q9H223 541 aa15.81■□□□□ 0.12
NPAS3-209ENST00000551008 RLFQ13129 1914 aa15.8■□□□□ 0.12
NPAS3-209ENST00000551008 ASNSP08243 561 aa15.8■□□□□ 0.12
NPAS3-209ENST00000551008 OSBPP22059 807 aa15.8■□□□□ 0.12
NPAS3-209ENST00000551008 SHMT1P34896 483 aa15.8■□□□□ 0.12
NPAS3-209ENST00000551008 PSMC4P43686 418 aa15.8■□□□□ 0.12
NPAS3-209ENST00000551008 CRACR2BQ8N4Y2 399 aaPredicted RBP15.8■□□□□ 0.12
NPAS3-209ENST00000551008 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
NPAS3-209ENST00000551008 CRBNQ96SW2 442 aa15.8■□□□□ 0.12
NPAS3-209ENST00000551008 ARMT1Q9H993 441 aa15.8■□□□□ 0.12
NPAS3-209ENST00000551008 GREB1LQ9C091 1923 aaPredicted RBP15.8■□□□□ 0.12
NPAS3-209ENST00000551008 PARP14Q460N5 1801 aa15.8■□□□□ 0.12
NPAS3-209ENST00000551008 PRKAB2O43741 272 aa15.79■□□□□ 0.12
NPAS3-209ENST00000551008 HLA-DOAP06340 250 aa15.79■□□□□ 0.12
NPAS3-209ENST00000551008 CYP2D6P10635 497 aa15.79■□□□□ 0.12
NPAS3-209ENST00000551008 GUCY1A2P33402 732 aa15.79■□□□□ 0.12
NPAS3-209ENST00000551008 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
NPAS3-209ENST00000551008 MTMR2Q13614 643 aa15.79■□□□□ 0.12
NPAS3-209ENST00000551008 POTEEQ6S8J3 1075 aa15.79■□□□□ 0.12
NPAS3-209ENST00000551008 OTUD7AQ8TE49 926 aaPredicted RBP15.79■□□□□ 0.12
NPAS3-209ENST00000551008 TBC1D2Q9BYX2 928 aa15.79■□□□□ 0.12
NPAS3-209ENST00000551008 DCP1AQ9NPI6 582 aaPredicted RBP15.79■□□□□ 0.12
NPAS3-209ENST00000551008 SRRDQ9UH36 339 aa15.79■□□□□ 0.12
NPAS3-209ENST00000551008 SERPINB13Q9UIV8 391 aa15.79■□□□□ 0.12
NPAS3-209ENST00000551008 MBD4O95243 580 aa15.78■□□□□ 0.12
NPAS3-209ENST00000551008 GH2P01242 217 aa15.78■□□□□ 0.12
NPAS3-209ENST00000551008 BACE1P56817 501 aa15.78■□□□□ 0.12
NPAS3-209ENST00000551008 SH3TC2Q8TF17 1288 aa15.78■□□□□ 0.12
NPAS3-209ENST00000551008 CRNKL1Q9BZJ0 848 aaKnown RBP15.78■□□□□ 0.12
NPAS3-209ENST00000551008 ECHDC1Q9NTX5 307 aa15.78■□□□□ 0.12
NPAS3-209ENST00000551008 GABRQQ9UN88 632 aa15.78■□□□□ 0.12
NPAS3-209ENST00000551008 SALL3Q9BXA9 1300 aa15.77■□□□□ 0.12
NPAS3-209ENST00000551008 PEX10O60683 326 aa15.77■□□□□ 0.12
NPAS3-209ENST00000551008 SLC44A5Q8NCS7 719 aa15.77■□□□□ 0.12
NPAS3-209ENST00000551008 ASCC2Q9H1I8 757 aaPredicted RBP15.77■□□□□ 0.12
NPAS3-209ENST00000551008 EMILIN3Q9NT22 766 aa15.77■□□□□ 0.12
NPAS3-209ENST00000551008 GINM1Q9NU53 330 aa15.77■□□□□ 0.12
NPAS3-209ENST00000551008 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
NPAS3-209ENST00000551008 GNRH1P01148 92 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 PRKCZQ05513 592 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 KIF22Q14807 665 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 UBE3CQ15386 1083 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 SLC9C1Q4G0N8 1177 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 TTC6Q86TZ1 520 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 PI4K2BQ8TCG2 481 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 PUS7LQ9H0K6 701 aaKnown RBP15.76■□□□□ 0.11
NPAS3-209ENST00000551008 AS3MTQ9HBK9 375 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 MCM9Q9NXL9 1143 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 A0A0G2JMZ2 1700 aa15.76■□□□□ 0.11
NPAS3-209ENST00000551008 MYPNQ86TC9 1320 aa15.75■□□□□ 0.11
NPAS3-209ENST00000551008 CYP2D7A0A087X1C5 515 aa15.75■□□□□ 0.11
NPAS3-209ENST00000551008 EN2P19622 333 aaPredicted RBP15.75■□□□□ 0.11
NPAS3-209ENST00000551008 HOXA7P31268 230 aaPredicted RBP15.75■□□□□ 0.11
NPAS3-209ENST00000551008 PRMT2P55345 433 aa15.75■□□□□ 0.11
NPAS3-209ENST00000551008 ARHGEF6Q15052 776 aa15.75■□□□□ 0.11
NPAS3-209ENST00000551008 FAM110CQ1W6H9 321 aa15.75■□□□□ 0.11
NPAS3-209ENST00000551008 ANKRD13CQ8N6S4 541 aa15.75■□□□□ 0.11
NPAS3-209ENST00000551008 ACER1Q8TDN7 264 aa15.75■□□□□ 0.11
NPAS3-209ENST00000551008 DYNLL2Q96FJ2 89 aa15.75■□□□□ 0.11
NPAS3-209ENST00000551008 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
NPAS3-209ENST00000551008 USP17L10C9JJH3 530 aa15.74■□□□□ 0.11
NPAS3-209ENST00000551008 FMNL1O95466 1100 aaPredicted RBP15.74■□□□□ 0.11
NPAS3-209ENST00000551008 MTFR1Q15390 333 aa15.74■□□□□ 0.11
NPAS3-209ENST00000551008 KBTBD3Q8NAB2 608 aa15.74■□□□□ 0.11
NPAS3-209ENST00000551008 SMCR8Q8TEV9 937 aaPredicted RBP15.74■□□□□ 0.11
NPAS3-209ENST00000551008 C12orf42Q96LP6 360 aa15.74■□□□□ 0.11
NPAS3-209ENST00000551008 TRIM34Q9BYJ4 488 aa15.74■□□□□ 0.11
NPAS3-209ENST00000551008 TXNRD2Q9NNW7 524 aa15.74■□□□□ 0.11
NPAS3-209ENST00000551008 MORF4L1Q9UBU8 362 aa15.74■□□□□ 0.11
NPAS3-209ENST00000551008 C19orf81C9J6K1 198 aa15.73■□□□□ 0.11
NPAS3-209ENST00000551008 POLR3DP05423 398 aaPredicted RBP15.73■□□□□ 0.11
NPAS3-209ENST00000551008 FCGRTP55899 365 aa15.73■□□□□ 0.11
NPAS3-209ENST00000551008 ABCB5Q2M3G0 1257 aa15.73■□□□□ 0.11
NPAS3-209ENST00000551008 CERKLQ49MI3 558 aaPredicted RBP15.73■□□□□ 0.11
NPAS3-209ENST00000551008 OSBP2Q969R2 916 aa15.73■□□□□ 0.11
NPAS3-209ENST00000551008 P2RX7Q99572 595 aaKnown RBP15.73■□□□□ 0.11
NPAS3-209ENST00000551008 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.73■□□□□ 0.11
NPAS3-209ENST00000551008 PNMA3Q9UL41 463 aa15.73■□□□□ 0.11
NPAS3-209ENST00000551008 A0A1W2PRG0 241 aa15.72■□□□□ 0.11
NPAS3-209ENST00000551008 MYCP01106 439 aaPredicted RBP15.72■□□□□ 0.11
NPAS3-209ENST00000551008 GCLCP48506 637 aaPredicted RBP15.72■□□□□ 0.11
NPAS3-209ENST00000551008 FLT3LGP49771 235 aa15.72■□□□□ 0.11
NPAS3-209ENST00000551008 SEPT2Q15019 361 aa15.72■□□□□ 0.11
NPAS3-209ENST00000551008 C12orf60Q5U649 245 aa15.72■□□□□ 0.11
NPAS3-209ENST00000551008 CLEC10AQ8IUN9 316 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms