RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 PAWRQ96IZ0 340 aaKnown RBP16.62■□□□□ 0.25
TROAP-211ENST00000549891 PRO3102Q9H379 93 aa16.62■□□□□ 0.25
TROAP-211ENST00000549891 HMX1Q9NP08 348 aaPredicted RBP16.62■□□□□ 0.25
TROAP-211ENST00000549891 FLT1P17948 1338 aa16.62■□□□□ 0.25
TROAP-211ENST00000549891 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
TROAP-211ENST00000549891 SURF6O75683 361 aaKnown RBP16.61■□□□□ 0.25
TROAP-211ENST00000549891 CYP2E1P05181 493 aaPredicted RBP16.61■□□□□ 0.25
TROAP-211ENST00000549891 ATP8B2P98198 1209 aa16.61■□□□□ 0.25
TROAP-211ENST00000549891 CERS3Q8IU89 383 aa16.61■□□□□ 0.25
TROAP-211ENST00000549891 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
TROAP-211ENST00000549891 GTF3C2Q8WUA4 911 aaPredicted RBP16.61■□□□□ 0.25
TROAP-211ENST00000549891 DBNDD2Q9BQY9 259 aa16.61■□□□□ 0.25
TROAP-211ENST00000549891 GJD2Q9UKL4 321 aa16.61■□□□□ 0.25
TROAP-211ENST00000549891 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
TROAP-211ENST00000549891 CCAR1Q8IX12 1150 aaKnown RBP16.6■□□□□ 0.25
TROAP-211ENST00000549891 GPRC5AQ8NFJ5 357 aa16.6■□□□□ 0.25
TROAP-211ENST00000549891 SOCS4Q8WXH5 440 aa16.6■□□□□ 0.25
TROAP-211ENST00000549891 NUDT12Q9BQG2 462 aa16.6■□□□□ 0.25
TROAP-211ENST00000549891 PALD1Q9ULE6 856 aa16.6■□□□□ 0.25
TROAP-211ENST00000549891 MAPK4P31152 587 aa16.59■□□□□ 0.25
TROAP-211ENST00000549891 HERVK_113P62684 666 aa16.59■□□□□ 0.25
TROAP-211ENST00000549891 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
TROAP-211ENST00000549891 ADGRA1Q86SQ6 560 aa16.59■□□□□ 0.25
TROAP-211ENST00000549891 FTSJ3Q8IY81 847 aaKnown RBP16.59■□□□□ 0.25
TROAP-211ENST00000549891 TRMT44Q8IYL2 757 aaKnown RBP16.59■□□□□ 0.25
TROAP-211ENST00000549891 NBPF3Q9H094 633 aa16.59■□□□□ 0.25
TROAP-211ENST00000549891 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
TROAP-211ENST00000549891 ZBTB21Q9ULJ3 1066 aa16.59■□□□□ 0.25
TROAP-211ENST00000549891 DDX60LQ5H9U9 1706 aaKnown RBP16.59■□□□□ 0.25
TROAP-211ENST00000549891 GDF11O95390 407 aa16.58■□□□□ 0.24
TROAP-211ENST00000549891 XRCC5P13010 732 aaKnown RBP16.58■□□□□ 0.24
TROAP-211ENST00000549891 ZAP70P43403 619 aa16.58■□□□□ 0.24
TROAP-211ENST00000549891 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.24
TROAP-211ENST00000549891 P2RX7Q99572 595 aaKnown RBP16.58■□□□□ 0.24
TROAP-211ENST00000549891 CYP2B6P20813 491 aa16.57■□□□□ 0.24
TROAP-211ENST00000549891 CYP7A1P22680 504 aa16.57■□□□□ 0.24
TROAP-211ENST00000549891 USP17L2Q6R6M4 530 aa16.57■□□□□ 0.24
TROAP-211ENST00000549891 DIS3LQ8TF46 1054 aaKnown RBP16.57■□□□□ 0.24
TROAP-211ENST00000549891 TRIB2Q92519 343 aa16.57■□□□□ 0.24
TROAP-211ENST00000549891 SAP30BPQ9UHR5 308 aaKnown RBP16.57■□□□□ 0.24
TROAP-211ENST00000549891 NOP58Q9Y2X3 529 aaKnown RBP16.57■□□□□ 0.24
TROAP-211ENST00000549891 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
TROAP-211ENST00000549891 USP5P45974 858 aa16.56■□□□□ 0.24
TROAP-211ENST00000549891 ERVK-9P63128 1117 aa16.56■□□□□ 0.24
TROAP-211ENST00000549891 ERVK-24P63145 666 aa16.56■□□□□ 0.24
TROAP-211ENST00000549891 JAG1P78504 1218 aa16.56■□□□□ 0.24
TROAP-211ENST00000549891 C11orf49Q9H6J7 331 aa16.56■□□□□ 0.24
TROAP-211ENST00000549891 PIH1D3Q9NQM4 214 aaKnown RBP16.56■□□□□ 0.24
TROAP-211ENST00000549891 STAP2Q9UGK3 403 aa16.56■□□□□ 0.24
TROAP-211ENST00000549891 DBNLQ9UJU6 430 aaKnown RBP16.56■□□□□ 0.24
TROAP-211ENST00000549891 OGDHLQ9ULD0 1010 aa16.56■□□□□ 0.24
TROAP-211ENST00000549891 PRKAR2AP13861 404 aaKnown RBP16.55■□□□□ 0.24
TROAP-211ENST00000549891 ZKSCAN1P17029 563 aaPredicted RBP16.55■□□□□ 0.24
TROAP-211ENST00000549891 RGS2P41220 211 aa16.55■□□□□ 0.24
TROAP-211ENST00000549891 TRIM32Q13049 653 aa16.55■□□□□ 0.24
TROAP-211ENST00000549891 MAP3K21Q5TCX8 1036 aa16.55■□□□□ 0.24
TROAP-211ENST00000549891 ITPRIPQ8IWB1 547 aa16.55■□□□□ 0.24
TROAP-211ENST00000549891 C7orf61Q8IZ16 206 aa16.55■□□□□ 0.24
TROAP-211ENST00000549891 FEZ1Q99689 392 aa16.55■□□□□ 0.24
TROAP-211ENST00000549891 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
TROAP-211ENST00000549891 TXNRD2Q9NNW7 524 aa16.55■□□□□ 0.24
TROAP-211ENST00000549891 RBPJLQ9UBG7 517 aa16.55■□□□□ 0.24
TROAP-211ENST00000549891 GH2P01242 217 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 BMP8BP34820 402 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 USP14P54578 494 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 DYNLL1P63167 89 aaKnown RBP16.54■□□□□ 0.24
TROAP-211ENST00000549891 CCNA1P78396 465 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 GPR142Q7Z601 462 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 TTC6Q86TZ1 520 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 PAGR1Q9BTK6 254 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 CCDC8Q9H0W5 538 aaPredicted RBP16.54■□□□□ 0.24
TROAP-211ENST00000549891 EHD4Q9H223 541 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 C1orf115Q9H7X2 142 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 EMILIN3Q9NT22 766 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
TROAP-211ENST00000549891 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 GLRX3O76003 335 aaKnown RBP16.53■□□□□ 0.24
TROAP-211ENST00000549891 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 SHROOM1Q2M3G4 852 aaPredicted RBP16.53■□□□□ 0.24
TROAP-211ENST00000549891 TATDN1Q6P1N9 297 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 PLEKHH3Q7Z736 793 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 MIGA1Q8NAN2 632 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
TROAP-211ENST00000549891 C12orf42Q96LP6 360 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 APBA2Q99767 749 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 TLR7Q9NYK1 1049 aaKnown RBP16.53■□□□□ 0.24
TROAP-211ENST00000549891 RABGAP1Q9Y3P9 1069 aa16.53■□□□□ 0.24
TROAP-211ENST00000549891 FRMPD3Q5JV73 1810 aa16.52■□□□□ 0.24
TROAP-211ENST00000549891 RAB3GAP1Q15042 981 aa16.52■□□□□ 0.24
TROAP-211ENST00000549891 Q3C1V9 767 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms