RNA–Protein interactions for RNA: ENST00000548545.1

MRPL42-204, Transcript of mitochondrial ribosomal protein L42, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene MRPL42, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-204ENST00000548545 PRAMEF13Q5VWM6 474 aa6.37□□□□□ -1.39
MRPL42-204ENST00000548545 SLC6A19Q695T7 634 aa6.37□□□□□ -1.39
MRPL42-204ENST00000548545 FBXO27Q8NI29 283 aa6.37□□□□□ -1.39
MRPL42-204ENST00000548545 ZNF296Q8WUU4 475 aaPredicted RBP6.37□□□□□ -1.39
MRPL42-204ENST00000548545 ACSF2Q96CM8 615 aaPredicted RBP6.37□□□□□ -1.39
MRPL42-204ENST00000548545 TMEM87BQ96K49 555 aa6.37□□□□□ -1.39
MRPL42-204ENST00000548545 BSDC1Q9NW68 430 aaPredicted RBP6.37□□□□□ -1.39
MRPL42-204ENST00000548545 CORINQ9Y5Q5 1042 aa6.37□□□□□ -1.39
MRPL42-204ENST00000548545 SCAMP3O14828 347 aaKnown RBP6.36□□□□□ -1.39
MRPL42-204ENST00000548545 RNF34Q969K3 372 aa6.36□□□□□ -1.39
MRPL42-204ENST00000548545 GTF2IRD1Q9UHL9 959 aa6.36□□□□□ -1.39
MRPL42-204ENST00000548545 PLCG1P19174 1290 aa6.35□□□□□ -1.39
MRPL42-204ENST00000548545 CRKP46108 304 aa6.35□□□□□ -1.39
MRPL42-204ENST00000548545 NFXL1Q6ZNB6 911 aa6.35□□□□□ -1.39
MRPL42-204ENST00000548545 METTL16Q86W50 562 aaKnown RBP6.35□□□□□ -1.39
MRPL42-204ENST00000548545 FAM181AQ8N9Y4 354 aa6.35□□□□□ -1.39
MRPL42-204ENST00000548545 NT5C1AQ9BXI3 368 aa6.35□□□□□ -1.39
MRPL42-204ENST00000548545 CCDC39Q9UFE4 941 aa6.35□□□□□ -1.39
MRPL42-204ENST00000548545 MAPK8IP1Q9UQF2 711 aa6.35□□□□□ -1.39
MRPL42-204ENST00000548545 CEACAM5P06731 702 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 CWF19L2Q2TBE0 894 aaKnown RBP6.34□□□□□ -1.39
MRPL42-204ENST00000548545 C22orf34Q6ZV56 151 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 NBPF11Q86T75 865 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 USP48Q86UV5 1035 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 VSIG10LQ86VR7 867 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 PLD6Q8N2A8 252 aaKnown RBP6.34□□□□□ -1.39
MRPL42-204ENST00000548545 RIN3Q8TB24 985 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 NETO1Q8TDF5 533 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 MIPEPQ99797 713 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 TNKS2Q9H2K2 1166 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 REV1Q9UBZ9 1251 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 PLAGL2Q9UPG8 496 aa6.34□□□□□ -1.39
MRPL42-204ENST00000548545 CNTNAP4Q9C0A0 1308 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 TLR3O15455 904 aaKnown RBP6.33□□□□□ -1.4
MRPL42-204ENST00000548545 GRIN3BO60391 1043 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 ATE1O95260 518 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 HTR3BO95264 441 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 WNT11O96014 354 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 IFI16Q16666 785 aaKnown RBP6.33□□□□□ -1.4
MRPL42-204ENST00000548545 ZNF394Q53GI3 561 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 LETMD1Q6P1Q0 360 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 WFDC3Q8IUB2 231 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 SLFN12Q8IYM2 578 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 BCL7CQ8WUZ0 217 aaPredicted RBP6.33□□□□□ -1.4
MRPL42-204ENST00000548545 EAF1Q96JC9 268 aaPredicted RBP6.33□□□□□ -1.4
MRPL42-204ENST00000548545 DPH2Q9BQC3 489 aaPredicted RBP6.33□□□□□ -1.4
MRPL42-204ENST00000548545 BRMS1Q9HCU9 246 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 PRDM5Q9NQX1 630 aaPredicted RBP6.33□□□□□ -1.4
MRPL42-204ENST00000548545 UBP1Q9NZI7 540 aa6.33□□□□□ -1.4
MRPL42-204ENST00000548545 DDX41Q9UJV9 622 aaKnown RBP6.33□□□□□ -1.4
MRPL42-204ENST00000548545 UPK3BL1B0FP48 263 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 UPK3BL2E5RIL1 263 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 DNAJA2O60884 412 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 ZNF865P0CJ78 1059 aaPredicted RBP6.32□□□□□ -1.4
MRPL42-204ENST00000548545 GP2P55259 537 aaKnown RBP6.32□□□□□ -1.4
MRPL42-204ENST00000548545 RACK1P63244 317 aaKnown RBP6.32□□□□□ -1.4
MRPL42-204ENST00000548545 ZNF746Q6NUN9 644 aaPredicted RBP6.32□□□□□ -1.4
MRPL42-204ENST00000548545 KIAA0825Q8IV33 1275 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 SLITRK4Q8IW52 837 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 REXO1Q8N1G1 1221 aaKnown RBP6.32□□□□□ -1.4
MRPL42-204ENST00000548545 DNAJB8Q8NHS0 232 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 PPP1R13LQ8WUF5 828 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 MISP3Q96FF7 219 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 SPON2Q9BUD6 331 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 EHMT1Q9H9B1 1298 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 PCDHGB7Q9Y5F8 929 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 SNX11Q9Y5W9 270 aa6.32□□□□□ -1.4
MRPL42-204ENST00000548545 YARSP54577 528 aaKnown RBP6.31□□□□□ -1.4
MRPL42-204ENST00000548545 HDLBPQ00341 1268 aaKnown RBP6.31□□□□□ -1.4
MRPL42-204ENST00000548545 PRKCQQ04759 706 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 APOBRQ0VD83 1088 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 NKPD1Q17RQ9 610 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 SPACA3Q8IXA5 215 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 STK11IPQ8N1F8 1099 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 FAM13CQ8NE31 585 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 XAGE3Q8WTP9 111 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 CYB5D2Q8WUJ1 264 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 COX4I2Q96KJ9 171 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 VAV3Q9UKW4 847 aa6.31□□□□□ -1.4
MRPL42-204ENST00000548545 ANGEL1Q9UNK9 670 aaKnown RBP6.31□□□□□ -1.4
MRPL42-204ENST00000548545 TMEM265A0A087WTH1 108 aa6.3□□□□□ -1.4
MRPL42-204ENST00000548545 SEZ6Q53EL9 994 aa6.3□□□□□ -1.4
MRPL42-204ENST00000548545 SFRP5Q5T4F7 317 aa6.3□□□□□ -1.4
MRPL42-204ENST00000548545 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
MRPL42-204ENST00000548545 TPX2Q9ULW0 747 aaKnown RBP6.3□□□□□ -1.4
MRPL42-204ENST00000548545 CEP131Q9UPN4 1083 aa6.3□□□□□ -1.4
MRPL42-204ENST00000548545 SLC5A6Q9Y289 635 aa6.3□□□□□ -1.4
MRPL42-204ENST00000548545 PCDHB14Q9Y5E9 798 aa6.3□□□□□ -1.4
MRPL42-204ENST00000548545 OAS3Q9Y6K5 1087 aaKnown RBP6.3□□□□□ -1.4
MRPL42-204ENST00000548545 SLC22A31A6NKX4 558 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 GNAT3A8MTJ3 354 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 PRR33A8MZF0 331 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 CHURC1-FNTBB4DL54 471 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 ITIH2P19823 946 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 CLCN7P51798 805 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 CLCQ05315 142 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 ARHGAP27Q6ZUM4 889 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 CDH24Q86UP0 819 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 ZNF654Q8IZM8 581 aa6.29□□□□□ -1.4
MRPL42-204ENST00000548545 NKD1Q969G9 470 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms