RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 FXNQ16595 210 aa9.54□□□□□ -0.88
LEMD3-206ENST00000545026 NKG7Q16617 165 aa9.54□□□□□ -0.88
LEMD3-206ENST00000545026 LARP1BQ659C4 914 aaKnown RBP9.54□□□□□ -0.88
LEMD3-206ENST00000545026 UBE3DQ7Z6J8 389 aa9.54□□□□□ -0.88
LEMD3-206ENST00000545026 MRFAP1L1Q96HT8 127 aa9.54□□□□□ -0.88
LEMD3-206ENST00000545026 SRPK1Q96SB4 655 aaKnown RBP9.54□□□□□ -0.88
LEMD3-206ENST00000545026 SLC9A7Q96T83 725 aa9.54□□□□□ -0.88
LEMD3-206ENST00000545026 AKTIPQ9H8T0 292 aa9.54□□□□□ -0.88
LEMD3-206ENST00000545026 ST7Q9NRC1 585 aa9.54□□□□□ -0.88
LEMD3-206ENST00000545026 SNTG2Q9NY99 539 aa9.54□□□□□ -0.88
LEMD3-206ENST00000545026 TBX22Q9Y458 520 aa9.54□□□□□ -0.88
LEMD3-206ENST00000545026 TLDC2A0PJX2 215 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 FAM221BA6H8Z2 402 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 ASPAP45381 313 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 ZYXQ15942 572 aaKnown RBP9.53□□□□□ -0.88
LEMD3-206ENST00000545026 SLC6A19Q695T7 634 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 UNC5AQ6ZN44 842 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 Q6ZS46 218 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 SLFN12Q8IYM2 578 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 ISL2Q96A47 359 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 DEPDC7Q96QD5 511 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 FAM105AQ9NUU6 356 aa9.53□□□□□ -0.88
LEMD3-206ENST00000545026 CAP2P40123 477 aa9.52□□□□□ -0.89
LEMD3-206ENST00000545026 PREPP48147 710 aa9.52□□□□□ -0.89
LEMD3-206ENST00000545026 SLBPQ14493 270 aaKnown RBP eCLIP9.52□□□□□ -0.89
LEMD3-206ENST00000545026 KCT2Q8NC54 265 aa9.52□□□□□ -0.89
LEMD3-206ENST00000545026 FAM13CQ8NE31 585 aa9.52□□□□□ -0.89
LEMD3-206ENST00000545026 TMA7Q9Y2S6 64 aaKnown RBP9.52□□□□□ -0.89
LEMD3-206ENST00000545026 LTBP3Q9NS15 1303 aa9.52□□□□□ -0.89
LEMD3-206ENST00000545026 YARSP54577 528 aaKnown RBP9.51□□□□□ -0.89
LEMD3-206ENST00000545026 CDC37L1Q7L3B6 337 aa9.51□□□□□ -0.89
LEMD3-206ENST00000545026 PIDD1Q9HB75 910 aa9.51□□□□□ -0.89
LEMD3-206ENST00000545026 USP21Q9UK80 565 aa9.51□□□□□ -0.89
LEMD3-206ENST00000545026 MAPK8IP1Q9UQF2 711 aa9.51□□□□□ -0.89
LEMD3-206ENST00000545026 SLC12A7Q9Y666 1083 aa9.51□□□□□ -0.89
LEMD3-206ENST00000545026 CCDC85CA6NKD9 419 aa9.5□□□□□ -0.89
LEMD3-206ENST00000545026 RNGTTO60942 597 aaKnown RBP9.5□□□□□ -0.89
LEMD3-206ENST00000545026 GJB6O95452 261 aa9.5□□□□□ -0.89
LEMD3-206ENST00000545026 RAG1P15918 1043 aa9.5□□□□□ -0.89
LEMD3-206ENST00000545026 POLR2BP30876 1174 aaKnown RBP9.5□□□□□ -0.89
LEMD3-206ENST00000545026 JAZF1Q86VZ6 243 aa9.5□□□□□ -0.89
LEMD3-206ENST00000545026 SMYD4Q8IYR2 804 aaPredicted RBP9.5□□□□□ -0.89
LEMD3-206ENST00000545026 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.49□□□□□ -0.89
LEMD3-206ENST00000545026 B2RBV5 119 aa9.49□□□□□ -0.89
LEMD3-206ENST00000545026 C9orf172C9J069 976 aa9.49□□□□□ -0.89
LEMD3-206ENST00000545026 CST3P01034 146 aaPredicted RBP9.49□□□□□ -0.89
LEMD3-206ENST00000545026 NOS3P29474 1203 aa9.49□□□□□ -0.89
LEMD3-206ENST00000545026 NRG1Q02297 640 aaPredicted RBP9.49□□□□□ -0.89
LEMD3-206ENST00000545026 C6orf15Q6UXA7 325 aaPredicted RBP9.49□□□□□ -0.89
LEMD3-206ENST00000545026 NLGN1Q8N2Q7 840 aa9.49□□□□□ -0.89
LEMD3-206ENST00000545026 WFDC12Q8WWY7 111 aa9.49□□□□□ -0.89
LEMD3-206ENST00000545026 SCARF2Q96GP6 870 aaPredicted RBP9.49□□□□□ -0.89
LEMD3-206ENST00000545026 DPH2Q9BQC3 489 aaPredicted RBP9.49□□□□□ -0.89
LEMD3-206ENST00000545026 CEP41Q9BYV8 373 aa9.49□□□□□ -0.89
LEMD3-206ENST00000545026 ACSS3Q9H6R3 686 aa9.49□□□□□ -0.89
LEMD3-206ENST00000545026 RGS13O14921 159 aa9.48□□□□□ -0.89
LEMD3-206ENST00000545026 DDAH1O94760 285 aa9.48□□□□□ -0.89
LEMD3-206ENST00000545026 RASGRF1Q13972 1273 aa9.48□□□□□ -0.89
LEMD3-206ENST00000545026 PRAMEF13Q5VWM6 474 aa9.48□□□□□ -0.89
LEMD3-206ENST00000545026 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.48□□□□□ -0.89
LEMD3-206ENST00000545026 FAM178BQ8IXR5 827 aa9.48□□□□□ -0.89
LEMD3-206ENST00000545026 FAM46AQ96IP4 442 aaKnown RBP9.48□□□□□ -0.89
LEMD3-206ENST00000545026 NACC1Q96RE7 527 aa9.48□□□□□ -0.89
LEMD3-206ENST00000545026 UBL7Q96S82 380 aaPredicted RBP9.48□□□□□ -0.89
LEMD3-206ENST00000545026 KIF2CQ99661 725 aa9.48□□□□□ -0.89
LEMD3-206ENST00000545026 PHAXQ9H814 394 aaKnown RBP9.48□□□□□ -0.89
LEMD3-206ENST00000545026 PCOLCE2Q9UKZ9 415 aa9.48□□□□□ -0.89
LEMD3-206ENST00000545026 FAM86C2PA6NEL3 165 aa9.47□□□□□ -0.89
LEMD3-206ENST00000545026 PDPK1O15530 556 aa9.47□□□□□ -0.89
LEMD3-206ENST00000545026 APBA3O96018 575 aa9.47□□□□□ -0.89
LEMD3-206ENST00000545026 GLB1P16278 677 aa9.47□□□□□ -0.89
LEMD3-206ENST00000545026 CCNFP41002 786 aa9.47□□□□□ -0.89
LEMD3-206ENST00000545026 IREB2P48200 963 aaKnown RBP9.47□□□□□ -0.89
LEMD3-206ENST00000545026 SDE2Q6IQ49 451 aa9.47□□□□□ -0.89
LEMD3-206ENST00000545026 CDPF1Q6NVV7 123 aa9.47□□□□□ -0.89
LEMD3-206ENST00000545026 FOXQ1Q9C009 403 aa9.47□□□□□ -0.89
LEMD3-206ENST00000545026 SSU72Q9NP77 194 aaKnown RBP9.47□□□□□ -0.89
LEMD3-206ENST00000545026 MRPL42Q9Y6G3 142 aaKnown RBP9.47□□□□□ -0.89
LEMD3-206ENST00000545026 SART1O43290 800 aaKnown RBP9.46□□□□□ -0.9
LEMD3-206ENST00000545026 UBOX5O94941 541 aa9.46□□□□□ -0.9
LEMD3-206ENST00000545026 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.9
LEMD3-206ENST00000545026 ADGRE1Q14246 886 aa9.46□□□□□ -0.9
LEMD3-206ENST00000545026 MBTPS1Q14703 1052 aa9.46□□□□□ -0.9
LEMD3-206ENST00000545026 MRM1Q6IN84 353 aaKnown RBP9.46□□□□□ -0.9
LEMD3-206ENST00000545026 PHACTR4Q8IZ21 702 aa9.46□□□□□ -0.9
LEMD3-206ENST00000545026 CYB5D2Q8WUJ1 264 aa9.46□□□□□ -0.9
LEMD3-206ENST00000545026 CCDC74BQ96LY2 380 aa9.46□□□□□ -0.9
LEMD3-206ENST00000545026 ZNF214Q9UL59 606 aaPredicted RBP9.46□□□□□ -0.9
LEMD3-206ENST00000545026 PCDHB10Q9UN67 800 aa9.46□□□□□ -0.9
LEMD3-206ENST00000545026 USP11P51784 963 aa9.45□□□□□ -0.9
LEMD3-206ENST00000545026 INSM1Q01101 510 aaPredicted RBP9.45□□□□□ -0.9
LEMD3-206ENST00000545026 VHLLQ6RSH7 139 aa9.45□□□□□ -0.9
LEMD3-206ENST00000545026 TMEM192Q8IY95 271 aa9.45□□□□□ -0.9
LEMD3-206ENST00000545026 BAHD1Q8TBE0 780 aaPredicted RBP9.45□□□□□ -0.9
LEMD3-206ENST00000545026 RNPC3Q96LT9 517 aaKnown RBP9.45□□□□□ -0.9
LEMD3-206ENST00000545026 DNAJC7Q99615 494 aa9.45□□□□□ -0.9
LEMD3-206ENST00000545026 GAS2O43903 313 aaKnown RBP9.44□□□□□ -0.9
LEMD3-206ENST00000545026 LRIG2O94898 1065 aa9.44□□□□□ -0.9
LEMD3-206ENST00000545026 RAB6AP20340 208 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms