RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 CCDC196A0A1B0GTZ2 297 aa20.83■□□□□ 0.93
CLPB-212ENST00000543042 USP17L3A6NCW0 530 aa20.83■□□□□ 0.93
CLPB-212ENST00000543042 USP17L4A6NCW7 530 aa20.83■□□□□ 0.93
CLPB-212ENST00000543042 GNL2Q13823 731 aaKnown RBP20.83■□□□□ 0.93
CLPB-212ENST00000543042 TRIM29Q14134 588 aa20.83■□□□□ 0.93
CLPB-212ENST00000543042 STK38Q15208 465 aa20.83■□□□□ 0.93
CLPB-212ENST00000543042 USP17L1Q7RTZ2 530 aa20.83■□□□□ 0.93
CLPB-212ENST00000543042 TBC1D22AQ8WUA7 517 aa20.83■□□□□ 0.93
CLPB-212ENST00000543042 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.83■□□□□ 0.93
CLPB-212ENST00000543042 DBNDD1Q9H9R9 158 aa20.83■□□□□ 0.93
CLPB-212ENST00000543042 SNW1Q13573 536 aaKnown RBP20.83■□□□□ 0.92
CLPB-212ENST00000543042 MAP3K11Q16584 847 aa20.83■□□□□ 0.92
CLPB-212ENST00000543042 ANO1Q5XXA6 986 aa20.83■□□□□ 0.92
CLPB-212ENST00000543042 CLSTN2Q9H4D0 955 aa20.83■□□□□ 0.92
CLPB-212ENST00000543042 MKNK2Q9HBH9 465 aa20.83■□□□□ 0.92
CLPB-212ENST00000543042 POLR3EQ9NVU0 708 aa20.83■□□□□ 0.92
CLPB-212ENST00000543042 DAGLAQ9Y4D2 1042 aa20.83■□□□□ 0.92
CLPB-212ENST00000543042 V9GY48 417 aaPredicted RBP20.83■□□□□ 0.92
CLPB-212ENST00000543042 LAMB1P07942 1786 aa20.82■□□□□ 0.92
CLPB-212ENST00000543042 U2AF2P26368 475 aaKnown RBP eCLIP20.82■□□□□ 0.92
CLPB-212ENST00000543042 MARCKSP29966 332 aaPredicted RBP20.82■□□□□ 0.92
CLPB-212ENST00000543042 SCNN1DP51172 638 aa20.82■□□□□ 0.92
CLPB-212ENST00000543042 RCAN1P53805 252 aa20.82■□□□□ 0.92
CLPB-212ENST00000543042 SF3A1Q15459 793 aaKnown RBP20.82■□□□□ 0.92
CLPB-212ENST00000543042 PKN1Q16512 942 aa20.82■□□□□ 0.92
CLPB-212ENST00000543042 OXER1Q8TDS5 423 aa20.82■□□□□ 0.92
CLPB-212ENST00000543042 PPP1R9BQ96SB3 815 aa20.82■□□□□ 0.92
CLPB-212ENST00000543042 FLT1P17948 1338 aa20.82■□□□□ 0.92
CLPB-212ENST00000543042 BAZ2BQ9UIF8 2168 aaKnown RBP20.82■□□□□ 0.92
CLPB-212ENST00000543042 A0A1B0GVL5 298 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 H0YIN7 160 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 SPTLC2O15270 562 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 DEXIO95424 95 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 DEFB132Q7Z7B7 95 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 FSIP1Q8NA03 581 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 FAM163AQ96GL9 167 aaPredicted RBP20.81■□□□□ 0.92
CLPB-212ENST00000543042 DDX19AQ9NUU7 478 aaKnown RBP20.81■□□□□ 0.92
CLPB-212ENST00000543042 GAKO14976 1311 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 MMP1P03956 469 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 CCDC173Q0VFZ6 552 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 NR5A1Q13285 461 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 SRBD1Q8N5C6 995 aaKnown RBP20.81■□□□□ 0.92
CLPB-212ENST00000543042 PIBF1Q8WXW3 757 aa20.81■□□□□ 0.92
CLPB-212ENST00000543042 ANP32BQ92688 251 aaKnown RBP20.81■□□□□ 0.92
CLPB-212ENST00000543042 IGSF3O75054 1194 aa20.8■□□□□ 0.92
CLPB-212ENST00000543042 VEGFAP15692 232 aaPredicted RBP20.8■□□□□ 0.92
CLPB-212ENST00000543042 DIS3L2Q8IYB7 885 aaKnown RBP20.8■□□□□ 0.92
CLPB-212ENST00000543042 ENGASEQ8NFI3 743 aa20.8■□□□□ 0.92
CLPB-212ENST00000543042 STK32BQ9NY57 414 aa20.8■□□□□ 0.92
CLPB-212ENST00000543042 VPS54Q9P1Q0 977 aa20.8■□□□□ 0.92
CLPB-212ENST00000543042 TTF2Q9UNY4 1162 aaKnown RBP20.8■□□□□ 0.92
CLPB-212ENST00000543042 WDHD1O75717 1129 aaPredicted RBP20.8■□□□□ 0.92
CLPB-212ENST00000543042 PICALMQ13492 652 aa20.8■□□□□ 0.92
CLPB-212ENST00000543042 WASF1Q92558 559 aa20.8■□□□□ 0.92
CLPB-212ENST00000543042 ERCC4Q92889 916 aaPredicted RBP20.8■□□□□ 0.92
CLPB-212ENST00000543042 G3V3G9 751 aa20.79■□□□□ 0.92
CLPB-212ENST00000543042 YEATS4O95619 227 aa20.79■□□□□ 0.92
CLPB-212ENST00000543042 RASA1P20936 1047 aa20.79■□□□□ 0.92
CLPB-212ENST00000543042 DCAF8Q5TAQ9 597 aa20.79■□□□□ 0.92
CLPB-212ENST00000543042 ADALQ6DHV7 355 aa20.79■□□□□ 0.92
CLPB-212ENST00000543042 MAP3K14Q99558 947 aa20.79■□□□□ 0.92
CLPB-212ENST00000543042 TMX4Q9H1E5 349 aaPredicted RBP20.79■□□□□ 0.92
CLPB-212ENST00000543042 MTMR7Q9Y216 660 aa20.79■□□□□ 0.92
CLPB-212ENST00000543042 TMTC3Q6ZXV5 915 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 NOSTRINQ8IVI9 506 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 ZNF444Q8N0Y2 327 aaPredicted RBP20.78■□□□□ 0.92
CLPB-212ENST00000543042 RNF26Q9BY78 433 aaPredicted RBP20.78■□□□□ 0.92
CLPB-212ENST00000543042 A0A087WWV3 80 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 DDAH1O94760 285 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 TSPY3P0CV98 308 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 TSPY8P0CW00 308 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 CDK8P49336 464 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 TOB1P50616 345 aaPredicted RBP20.78■□□□□ 0.92
CLPB-212ENST00000543042 NDUFA8P51970 172 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 TYRO3Q06418 890 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 AXDND1Q5T1B0 1012 aaPredicted RBP20.78■□□□□ 0.92
CLPB-212ENST00000543042 AMOTL1Q8IY63 956 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 RGS22Q8NE09 1264 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 PCDHAC2Q9Y5I4 1007 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 MRVI1Q9Y6F6 885 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 CDK5RAP2Q96SN8 1893 aa20.78■□□□□ 0.92
CLPB-212ENST00000543042 ROBO3Q96MS0 1386 aa20.77■□□□□ 0.92
CLPB-212ENST00000543042 SLX4Q8IY92 1834 aa20.77■□□□□ 0.92
CLPB-212ENST00000543042 CCDC192P0DO97 292 aa20.77■□□□□ 0.92
CLPB-212ENST00000543042 SLC39A14Q15043 492 aa20.77■□□□□ 0.92
CLPB-212ENST00000543042 PTPAQ15257 358 aa20.77■□□□□ 0.92
CLPB-212ENST00000543042 RBM43Q6ZSC3 357 aaKnown RBP20.77■□□□□ 0.92
CLPB-212ENST00000543042 RASGRP2Q7LDG7 609 aa20.77■□□□□ 0.92
CLPB-212ENST00000543042 KCNG4Q8TDN1 519 aa20.77■□□□□ 0.92
CLPB-212ENST00000543042 DDX4Q9NQI0 724 aaKnown RBP20.77■□□□□ 0.92
CLPB-212ENST00000543042 PRPF3O43395 683 aaKnown RBP20.77■□□□□ 0.91
CLPB-212ENST00000543042 CALM1P0DP23 149 aa20.77■□□□□ 0.91
CLPB-212ENST00000543042 CALM2P0DP24 149 aa20.77■□□□□ 0.91
CLPB-212ENST00000543042 CALM3P0DP25 149 aa20.77■□□□□ 0.91
CLPB-212ENST00000543042 AKAP17AQ02040 695 aaKnown RBP20.77■□□□□ 0.91
CLPB-212ENST00000543042 FAM160A1Q05DH4 1040 aa20.77■□□□□ 0.91
CLPB-212ENST00000543042 PPP2R5BQ15173 497 aa20.77■□□□□ 0.91
CLPB-212ENST00000543042 CCDC73Q6ZRK6 1079 aa20.77■□□□□ 0.91
CLPB-212ENST00000543042 SLF2Q8IX21 1173 aa20.77■□□□□ 0.91
CLPB-212ENST00000543042 STAG2Q8N3U4 1231 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms