RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MYL5Q02045 173 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 METTL16Q86W50 562 aaKnown RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 ZSCAN10Q96SZ4 725 aaPredicted RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 ANKRD2Q9GZV1 360 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 BCL2L12Q9HB09 334 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 NARFQ9UHQ1 456 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 PAXBP1Q9Y5B6 917 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 BAZ2AQ9UIF9 1905 aaKnown RBP7.53□□□□□ -1.2
PTPRO-208ENST00000542557 THSD7AQ9UPZ6 1657 aa7.53□□□□□ -1.2
PTPRO-208ENST00000542557 MINDY4BA8MYZ0 360 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 DDAH1O94760 285 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 SKILP12757 684 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 XBP1P17861 261 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 FILIP1Q7Z7B0 1213 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 ENAHQ8N8S7 591 aaPredicted RBP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 CELF1Q92879 486 aaKnown RBP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 CLIC6Q96NY7 704 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 XPO4Q9C0E2 1151 aaKnown RBP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 CCDC88AQ3V6T2 1871 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 BIN1O00499 593 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 PRPF3O43395 683 aaKnown RBP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 ORC4O43929 436 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 TNNT1P13805 278 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 FUT2Q10981 343 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 SYCP1Q15431 976 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 VPS72Q15906 364 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 NT5DC1Q5TFE4 455 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 TBC1D9BQ66K14 1250 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 NYAP1Q6ZVC0 841 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 IQCA1Q86XH1 822 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 CNNM3Q8NE01 707 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 ZNF384Q8TF68 577 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 NUP133Q8WUM0 1156 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 NSUN4Q96CB9 384 aaKnown RBP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 C16orf45Q96MC5 204 aaPredicted RBP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 BCL11BQ9C0K0 894 aaPredicted RBP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 HSD3B7Q9H2F3 369 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 KCNJ14Q9UNX9 436 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 IQSEC3Q9UPP2 1182 aaPredicted RBP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 SRPRBQ9Y5M8 271 aaKnown RBP7.52□□□□□ -1.21
PTPRO-208ENST00000542557 MYH2Q9UKX2 1941 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 LY75O60449 1722 aa7.52□□□□□ -1.21
PTPRO-208ENST00000542557 NUTM2BA6NNL0 878 aaPredicted RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 NUTM2EB1AL46 878 aaPredicted RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 CBFA2T2O43439 604 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 RPS6KA4O75676 772 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 SMC2O95347 1197 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 BMP15O95972 392 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 RPS8P62241 208 aaKnown RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 PNOCQ13519 176 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 ARID5BQ14865 1188 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 TPD52L1Q16890 204 aaPredicted RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 LONRF3Q496Y0 759 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 GLIPR1L2Q4G1C9 344 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 IFIT1BQ5T764 474 aaKnown RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 OLFM4Q6UX06 510 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 CATIPQ7Z7H3 387 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 NUTM2AQ8IVF1 878 aaPredicted RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 FBXW7Q969H0 707 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 ATP8A2Q9NTI2 1148 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 IFNKQ9P0W0 207 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 KIF2AO00139 706 aaPredicted RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 DYNLL1P63167 89 aaKnown RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 FANCCQ00597 558 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 AKAP17AQ02040 695 aaKnown RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 TROAPQ12815 778 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 PKN1Q16512 942 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 SBK1Q52WX2 424 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 KANK3Q6NY19 840 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 CTR9Q6PD62 1173 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 ZNF710Q8N1W2 664 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 TRIML1Q8N9V2 468 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 NLRP3Q96P20 1036 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 PHF20Q9BVI0 1012 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 TAF1LQ8IZX4 1826 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 NRDCO43847 1150 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 HIBADHP31937 336 aaKnown RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 KRT2P35908 639 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 NR5A1Q13285 461 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 FAM98CQ17RN3 349 aaKnown RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 TMTC3Q6ZXV5 915 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 FAM177A1Q8N128 213 aaPredicted RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 CCAR2Q8N163 923 aaKnown RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 SETDB2Q96T68 719 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 CRNKL1Q9BZJ0 848 aaKnown RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 ARPP21Q9UBL0 812 aaPredicted RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 DACH1Q9UI36 760 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 PCDHA5Q9Y5H7 936 aa7.51□□□□□ -1.21
PTPRO-208ENST00000542557 TNRC6CQ9HCJ0 1690 aaKnown RBP7.51□□□□□ -1.21
PTPRO-208ENST00000542557 IRS2Q9Y4H2 1338 aa7.5□□□□□ -1.21
PTPRO-208ENST00000542557 SBF2Q86WG5 1849 aa7.5□□□□□ -1.21
PTPRO-208ENST00000542557 SFPQP23246 707 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTPRO-208ENST00000542557 MECOMQ03112 1051 aa7.5□□□□□ -1.21
PTPRO-208ENST00000542557 POSTNQ15063 836 aa7.5□□□□□ -1.21
PTPRO-208ENST00000542557 CC2D2BQ6DHV5 1058 aa7.5□□□□□ -1.21
PTPRO-208ENST00000542557 TMC6Q7Z403 805 aa7.5□□□□□ -1.21
PTPRO-208ENST00000542557 ANKRD7Q92527 254 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms