RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 SCAF8Q9UPN6 1271 aaKnown RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 TCHHQ07283 1943 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 IQCA1LA6NCM1 817 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 SLURP2P0DP57 97 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 PDCP20941 246 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 DEKP35659 375 aaKnown RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 APOBRQ0VD83 1088 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 TRDNQ13061 729 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 STK3Q13188 491 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 FOXD4L5Q5VV16 416 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 C16orf86Q6ZW13 317 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 SLC44A5Q8NCS7 719 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 FOXD4L4Q8WXT5 416 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 LLPHQ9BRT6 129 aaKnown RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 TMEM39BQ9GZU3 492 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 EHD4Q9H223 541 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 DHX36Q9H2U1 1008 aaKnown RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 SSC5DA1L4H1 1573 aa14.63□□□□□ -0.07
SMAD3-204ENST00000540846 ORC4O43929 436 aa14.63□□□□□ -0.07
SMAD3-204ENST00000540846 F13A1P00488 732 aa14.63□□□□□ -0.07
SMAD3-204ENST00000540846 POLR3DP05423 398 aaPredicted RBP14.63□□□□□ -0.07
SMAD3-204ENST00000540846 SCRN1Q12765 414 aa14.63□□□□□ -0.07
SMAD3-204ENST00000540846 RASA3Q14644 834 aa14.63□□□□□ -0.07
SMAD3-204ENST00000540846 SMARCC2Q8TAQ2 1214 aa14.63□□□□□ -0.07
SMAD3-204ENST00000540846 LMBRD1Q9NUN5 540 aa14.63□□□□□ -0.07
SMAD3-204ENST00000540846 MTMR6Q9Y217 621 aa14.63□□□□□ -0.07
SMAD3-204ENST00000540846 MYH15Q9Y2K3 1946 aa14.62□□□□□ -0.07
SMAD3-204ENST00000540846 PCP11498 1178 aaKnown RBP14.62□□□□□ -0.07
SMAD3-204ENST00000540846 TNFAIP1Q13829 316 aa14.62□□□□□ -0.07
SMAD3-204ENST00000540846 CHST3Q7LGC8 479 aa14.62□□□□□ -0.07
SMAD3-204ENST00000540846 TTC6Q86TZ1 520 aa14.62□□□□□ -0.07
SMAD3-204ENST00000540846 APOBEC3FQ8IUX4 373 aaKnown RBP14.62□□□□□ -0.07
SMAD3-204ENST00000540846 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
SMAD3-204ENST00000540846 CNNM2Q9H8M5 875 aa14.62□□□□□ -0.07
SMAD3-204ENST00000540846 ATAD5Q96QE3 1844 aa14.62□□□□□ -0.07
SMAD3-204ENST00000540846 PDIA3P30101 505 aaKnown RBP14.61□□□□□ -0.07
SMAD3-204ENST00000540846 MAP3K10Q02779 954 aa14.61□□□□□ -0.07
SMAD3-204ENST00000540846 KLHL40Q2TBA0 621 aa14.61□□□□□ -0.07
SMAD3-204ENST00000540846 MFSD6Q6ZSS7 791 aa14.61□□□□□ -0.07
SMAD3-204ENST00000540846 CYB5R4Q7L1T6 521 aa14.61□□□□□ -0.07
SMAD3-204ENST00000540846 STK11IPQ8N1F8 1099 aa14.61□□□□□ -0.07
SMAD3-204ENST00000540846 ZC3H15Q8WU90 426 aaKnown RBP14.61□□□□□ -0.07
SMAD3-204ENST00000540846 DEFB129Q9H1M3 183 aa14.61□□□□□ -0.07
SMAD3-204ENST00000540846 PI4KBQ9UBF8 816 aa14.61□□□□□ -0.07
SMAD3-204ENST00000540846 SERPINB13Q9UIV8 391 aa14.61□□□□□ -0.07
SMAD3-204ENST00000540846 OTOFQ9HC10 1997 aa14.61□□□□□ -0.07
SMAD3-204ENST00000540846 FAM196BA6NMK8 535 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 B4E1Z4 1266 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 JAK2O60674 1132 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 PRDM1O75626 825 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 POTEIP0CG38 1075 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 POTEJP0CG39 1038 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 RASA1P20936 1047 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 SHMT1P34896 483 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 TNNI2P48788 182 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 CDK8P49336 464 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 LARP1BQ659C4 914 aaKnown RBP14.6□□□□□ -0.07
SMAD3-204ENST00000540846 AMOTL1Q8IY63 956 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 NSUN7Q8NE18 718 aaKnown RBP14.6□□□□□ -0.07
SMAD3-204ENST00000540846 TMEM87BQ96K49 555 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 CSRNP1Q96S65 589 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 RNF41Q9H4P4 317 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-204ENST00000540846 NMRK2Q9NPI5 230 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 GPHNQ9NQX3 736 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-204ENST00000540846 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 ATP6V1DQ9Y5K8 247 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 SH2B2O14492 632 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-204ENST00000540846 HLA-DOAP06340 250 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 VEGFAP15692 232 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-204ENST00000540846 HMGN5P82970 282 aaKnown RBP14.6□□□□□ -0.07
SMAD3-204ENST00000540846 ZSCAN29Q8IWY8 852 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-204ENST00000540846 CHAMP1Q96JM3 812 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 KRT23Q9C075 422 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 RRAGCQ9HB90 399 aa14.6□□□□□ -0.07
SMAD3-204ENST00000540846 ANGEL1Q9UNK9 670 aaKnown RBP14.6□□□□□ -0.07
SMAD3-204ENST00000540846 VPS37CA5D8V6 355 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-204ENST00000540846 DTNBO60941 627 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 KDM4AO75164 1064 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 CTDNEP1O95476 244 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 PDE4BQ07343 736 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 TATDN1Q6P1N9 297 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 PNMA8AQ86V59 439 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-204ENST00000540846 FOXP4Q8IVH2 680 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-204ENST00000540846 TMEM87AQ8NBN3 555 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 ZSWIM5Q9P217 1185 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 BRPF3Q9ULD4 1205 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 PPP2R3BQ9Y5P8 575 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 PLIN4Q96Q06 1357 aa14.59□□□□□ -0.07
SMAD3-204ENST00000540846 DOCK1Q14185 1865 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 KLF18A0A0U1RQI7 1052 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 PTPDC1A2A3K4 754 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 GOLGA8BA8MQT2 603 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 TBC1D12O60347 775 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 SLC3A2P08195 630 aaKnown RBP14.58□□□□□ -0.08
SMAD3-204ENST00000540846 RRP1BQ14684 758 aaKnown RBP14.58□□□□□ -0.08
SMAD3-204ENST00000540846 NBPF12Q5TAG4 269 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-204ENST00000540846 DLK2Q6UY11 383 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 CDC37L1Q7L3B6 337 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 SGMS1Q86VZ5 419 aa14.58□□□□□ -0.08
SMAD3-204ENST00000540846 MTA3Q9BTC8 594 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms