RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ASCC2Q9H1I8 757 aaPredicted RBP18.59■□□□□ 0.57
UBE3B-211ENST00000539843 ZBTB21Q9ULJ3 1066 aa18.59■□□□□ 0.57
UBE3B-211ENST00000539843 HTTP42858 3142 aa18.58■□□□□ 0.56
UBE3B-211ENST00000539843 GDF11O95390 407 aa18.58■□□□□ 0.56
UBE3B-211ENST00000539843 INHAP05111 366 aa18.58■□□□□ 0.56
UBE3B-211ENST00000539843 DYNLL1P63167 89 aaKnown RBP18.58■□□□□ 0.56
UBE3B-211ENST00000539843 METTL16Q86W50 562 aaKnown RBP18.58■□□□□ 0.56
UBE3B-211ENST00000539843 RHPN1Q8TCX5 695 aa18.58■□□□□ 0.56
UBE3B-211ENST00000539843 U2AF1L4Q8WU68 220 aaKnown RBP18.58■□□□□ 0.56
UBE3B-211ENST00000539843 FEZ1Q99689 392 aa18.58■□□□□ 0.56
UBE3B-211ENST00000539843 CWC22Q9HCG8 908 aaKnown RBP18.58■□□□□ 0.56
UBE3B-211ENST00000539843 PTPRFP10586 1907 aa18.57■□□□□ 0.56
UBE3B-211ENST00000539843 HABP4Q5JVS0 413 aaKnown RBP18.57■□□□□ 0.56
UBE3B-211ENST00000539843 EHD4Q9H223 541 aa18.57■□□□□ 0.56
UBE3B-211ENST00000539843 IL1RAPL2Q9NP60 686 aa18.57■□□□□ 0.56
UBE3B-211ENST00000539843 CABP5Q9NP86 173 aa18.57■□□□□ 0.56
UBE3B-211ENST00000539843 SERPINB13Q9UIV8 391 aa18.57■□□□□ 0.56
UBE3B-211ENST00000539843 PHIPQ8WWQ0 1821 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 APBB1O00213 710 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 RAB11FIP3O75154 756 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 FARP2O94887 1054 aaPredicted RBP18.56■□□□□ 0.56
UBE3B-211ENST00000539843 ELNP15502 786 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 HOXA7P31268 230 aaPredicted RBP18.56■□□□□ 0.56
UBE3B-211ENST00000539843 USP14P54578 494 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 USP17L2Q6R6M4 530 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 SHISA4Q96DD7 197 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 CRNKL1Q9BZJ0 848 aaKnown RBP18.56■□□□□ 0.56
UBE3B-211ENST00000539843 UNC93B1Q9H1C4 597 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 NR2E3Q9Y5X4 410 aa18.56■□□□□ 0.56
UBE3B-211ENST00000539843 LOC285556D6RIA3 1793 aa18.55■□□□□ 0.56
UBE3B-211ENST00000539843 MAGEB6P1A0A0J9YX57 407 aa18.55■□□□□ 0.56
UBE3B-211ENST00000539843 SGPL1O95470 568 aa18.55■□□□□ 0.56
UBE3B-211ENST00000539843 TFRCP02786 760 aaKnown RBP18.55■□□□□ 0.56
UBE3B-211ENST00000539843 POLR3DP05423 398 aaPredicted RBP18.55■□□□□ 0.56
UBE3B-211ENST00000539843 RRP1BQ14684 758 aaKnown RBP18.55■□□□□ 0.56
UBE3B-211ENST00000539843 GPRC5AQ8NFJ5 357 aa18.55■□□□□ 0.56
UBE3B-211ENST00000539843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.55■□□□□ 0.56
UBE3B-211ENST00000539843 SOCS4Q8WXH5 440 aa18.55■□□□□ 0.56
UBE3B-211ENST00000539843 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
UBE3B-211ENST00000539843 DNAJC18Q9H819 358 aa18.55■□□□□ 0.56
UBE3B-211ENST00000539843 MORF4L1Q9UBU8 362 aa18.55■□□□□ 0.56
UBE3B-211ENST00000539843 ATAD5Q96QE3 1844 aa18.55■□□□□ 0.56
UBE3B-211ENST00000539843 MGAMO43451 1857 aa18.54■□□□□ 0.56
UBE3B-211ENST00000539843 GH2P01242 217 aa18.54■□□□□ 0.56
UBE3B-211ENST00000539843 HMGCRP04035 888 aa18.54■□□□□ 0.56
UBE3B-211ENST00000539843 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
UBE3B-211ENST00000539843 CERKLQ49MI3 558 aaPredicted RBP18.54■□□□□ 0.56
UBE3B-211ENST00000539843 DNAJC2Q99543 621 aaKnown RBP18.54■□□□□ 0.56
UBE3B-211ENST00000539843 ANTXR1Q9H6X2 564 aa18.54■□□□□ 0.56
UBE3B-211ENST00000539843 COG6Q9Y2V7 657 aa18.54■□□□□ 0.56
UBE3B-211ENST00000539843 MAPK4P31152 587 aa18.53■□□□□ 0.56
UBE3B-211ENST00000539843 HERVK_113P62684 666 aa18.53■□□□□ 0.56
UBE3B-211ENST00000539843 ABCB5Q2M3G0 1257 aa18.53■□□□□ 0.56
UBE3B-211ENST00000539843 SLC9C2Q5TAH2 1124 aa18.53■□□□□ 0.56
UBE3B-211ENST00000539843 AMOTL1Q8IY63 956 aa18.53■□□□□ 0.56
UBE3B-211ENST00000539843 TRMT44Q8IYL2 757 aaKnown RBP18.53■□□□□ 0.56
UBE3B-211ENST00000539843 DEFB118Q96PH6 123 aa18.53■□□□□ 0.56
UBE3B-211ENST00000539843 NUDT12Q9BQG2 462 aa18.53■□□□□ 0.56
UBE3B-211ENST00000539843 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.53■□□□□ 0.56
UBE3B-211ENST00000539843 NDUFB9Q9Y6M9 179 aa18.53■□□□□ 0.56
UBE3B-211ENST00000539843 GOLIM4O00461 696 aa18.52■□□□□ 0.56
UBE3B-211ENST00000539843 CCNA1P78396 465 aa18.52■□□□□ 0.56
UBE3B-211ENST00000539843 TATDN1Q6P1N9 297 aa18.52■□□□□ 0.56
UBE3B-211ENST00000539843 DDRGK1Q96HY6 314 aa18.52■□□□□ 0.56
UBE3B-211ENST00000539843 P2RX7Q99572 595 aaKnown RBP18.52■□□□□ 0.56
UBE3B-211ENST00000539843 HMX1Q9NP08 348 aaPredicted RBP18.52■□□□□ 0.56
UBE3B-211ENST00000539843 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.56
UBE3B-211ENST00000539843 H0YGN5 161 aa18.51■□□□□ 0.55
UBE3B-211ENST00000539843 GLRX3O76003 335 aaKnown RBP18.51■□□□□ 0.55
UBE3B-211ENST00000539843 PDE6AP16499 860 aa18.51■□□□□ 0.55
UBE3B-211ENST00000539843 PAGR1Q9BTK6 254 aa18.51■□□□□ 0.55
UBE3B-211ENST00000539843 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.51■□□□□ 0.55
UBE3B-211ENST00000539843 PAK6Q9NQU5 681 aaPredicted RBP18.51■□□□□ 0.55
UBE3B-211ENST00000539843 MCM9Q9NXL9 1143 aa18.51■□□□□ 0.55
UBE3B-211ENST00000539843 FOCADQ5VW36 1801 aa18.51■□□□□ 0.55
UBE3B-211ENST00000539843 USP17L15C9J2P7 530 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 USP17L13C9JLJ4 530 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 USP17L11C9JVI0 530 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 USP17L18D6R9N7 530 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 USP17L22D6RA61 530 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 USP17L17D6RBQ6 530 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 USP17L19D6RCP7 530 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 USP17L20D6RJB6 530 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 ERVK-9P63128 1117 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 ERVK-24P63145 666 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 USP17L24Q0WX57 530 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 ZYXQ15942 572 aaKnown RBP18.5■□□□□ 0.55
UBE3B-211ENST00000539843 C12orf42Q96LP6 360 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 RIOK1Q9BRS2 568 aaKnown RBP18.5■□□□□ 0.55
UBE3B-211ENST00000539843 ZBTB40Q9NUA8 1239 aa18.5■□□□□ 0.55
UBE3B-211ENST00000539843 RPTORQ8N122 1335 aa18.49■□□□□ 0.55
UBE3B-211ENST00000539843 ZNF532Q9HCE3 1301 aa18.49■□□□□ 0.55
UBE3B-211ENST00000539843 MPHOSPH10O00566 681 aaKnown RBP18.49■□□□□ 0.55
UBE3B-211ENST00000539843 RGS2P41220 211 aa18.49■□□□□ 0.55
UBE3B-211ENST00000539843 ANKLE1Q8NAG6 615 aa18.49■□□□□ 0.55
UBE3B-211ENST00000539843 EMILIN3Q9NT22 766 aa18.49■□□□□ 0.55
UBE3B-211ENST00000539843 COLQQ9Y215 455 aaPredicted RBP18.49■□□□□ 0.55
UBE3B-211ENST00000539843 SIPA1L1O43166 1804 aa18.49■□□□□ 0.55
UBE3B-211ENST00000539843 EVI5O60447 810 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms