RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 FBXO18Q8NFZ0 1043 aa23.66■■□□□ 1.38
CDH5-202ENST00000539168 MAP3K14Q99558 947 aa23.66■■□□□ 1.38
CDH5-202ENST00000539168 SWAP70Q9UH65 585 aa23.66■■□□□ 1.38
CDH5-202ENST00000539168 FMNL1O95466 1100 aaPredicted RBP23.65■■□□□ 1.38
CDH5-202ENST00000539168 HLA-DOAP06340 250 aa23.65■■□□□ 1.38
CDH5-202ENST00000539168 NUP133Q8WUM0 1156 aa23.65■■□□□ 1.38
CDH5-202ENST00000539168 KCNQ5Q9NR82 932 aa23.65■■□□□ 1.38
CDH5-202ENST00000539168 CFAP45Q9UL16 551 aa23.65■■□□□ 1.38
CDH5-202ENST00000539168 RXRAP19793 462 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 CDK8P49336 464 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 DNM1Q05193 864 aaKnown RBP23.64■■□□□ 1.38
CDH5-202ENST00000539168 FAM47AQ5JRC9 791 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 USP48Q86UV5 1035 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 FERMT3Q86UX7 667 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 NIM1KQ8IY84 436 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 DYNLL2Q96FJ2 89 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 SGIP1Q9BQI5 828 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 MYL10Q9BUA6 226 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 DHX36Q9H2U1 1008 aaKnown RBP23.64■■□□□ 1.38
CDH5-202ENST00000539168 HDAC9Q9UKV0 1011 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 CNPY2Q9Y2B0 182 aa23.64■■□□□ 1.38
CDH5-202ENST00000539168 ELP1O95163 1332 aa23.64■■□□□ 1.37
CDH5-202ENST00000539168 DTNBO60941 627 aa23.64■■□□□ 1.37
CDH5-202ENST00000539168 MMP14P50281 582 aa23.64■■□□□ 1.37
CDH5-202ENST00000539168 TRIM29Q14134 588 aa23.64■■□□□ 1.37
CDH5-202ENST00000539168 CTCFLQ8NI51 663 aaPredicted RBP23.64■■□□□ 1.37
CDH5-202ENST00000539168 ALG1Q9BT22 464 aa23.64■■□□□ 1.37
CDH5-202ENST00000539168 IDI2Q9BXS1 227 aa23.64■■□□□ 1.37
CDH5-202ENST00000539168 OSBPL5Q9H0X9 879 aaPredicted RBP23.64■■□□□ 1.37
CDH5-202ENST00000539168 ZNRF3Q9ULT6 936 aa23.64■■□□□ 1.37
CDH5-202ENST00000539168 ECM29Q5VYK3 1845 aa23.63■■□□□ 1.37
CDH5-202ENST00000539168 YDJCA8MPS7 323 aa23.63■■□□□ 1.37
CDH5-202ENST00000539168 VIL1P09327 827 aaKnown RBP23.63■■□□□ 1.37
CDH5-202ENST00000539168 RASA1P20936 1047 aa23.63■■□□□ 1.37
CDH5-202ENST00000539168 KIF5BP33176 963 aa23.63■■□□□ 1.37
CDH5-202ENST00000539168 TROAPQ12815 778 aa23.63■■□□□ 1.37
CDH5-202ENST00000539168 FOXD4L6Q3SYB3 417 aaPredicted RBP23.63■■□□□ 1.37
CDH5-202ENST00000539168 RSBN1LQ6PCB5 846 aaPredicted RBP23.63■■□□□ 1.37
CDH5-202ENST00000539168 FOXD4L3Q6VB84 417 aaPredicted RBP23.63■■□□□ 1.37
CDH5-202ENST00000539168 CCDC144CPQ8IYA2 1237 aa23.63■■□□□ 1.37
CDH5-202ENST00000539168 ZNF396Q96N95 335 aaPredicted RBP23.63■■□□□ 1.37
CDH5-202ENST00000539168 RNF26Q9BY78 433 aaPredicted RBP23.63■■□□□ 1.37
CDH5-202ENST00000539168 KAT14Q9H8E8 782 aa23.63■■□□□ 1.37
CDH5-202ENST00000539168 DEXIO95424 95 aa23.62■■□□□ 1.37
CDH5-202ENST00000539168 RBM5P52756 815 aaKnown RBP eCLIP23.62■■□□□ 1.37
CDH5-202ENST00000539168 UBE2HP62256 183 aa23.62■■□□□ 1.37
CDH5-202ENST00000539168 PICALMQ13492 652 aa23.62■■□□□ 1.37
CDH5-202ENST00000539168 BRAPQ7Z569 592 aa23.62■■□□□ 1.37
CDH5-202ENST00000539168 NEDD1Q8NHV4 660 aa23.62■■□□□ 1.37
CDH5-202ENST00000539168 EHD4Q9H223 541 aa23.62■■□□□ 1.37
CDH5-202ENST00000539168 TAOK3Q9H2K8 898 aa23.62■■□□□ 1.37
CDH5-202ENST00000539168 ISY1Q9ULR0 285 aaKnown RBP23.62■■□□□ 1.37
CDH5-202ENST00000539168 BRCA1P38398 1863 aaKnown RBP23.62■■□□□ 1.37
CDH5-202ENST00000539168 TCHHQ07283 1943 aa23.62■■□□□ 1.37
CDH5-202ENST00000539168 AKAP17AQ02040 695 aaKnown RBP23.61■■□□□ 1.37
CDH5-202ENST00000539168 EVX2Q03828 476 aa23.61■■□□□ 1.37
CDH5-202ENST00000539168 PPP4R3BQ5MIZ7 849 aa23.61■■□□□ 1.37
CDH5-202ENST00000539168 CRACR2BQ8N4Y2 399 aaPredicted RBP23.61■■□□□ 1.37
CDH5-202ENST00000539168 SYAP1Q96A49 352 aaPredicted RBP23.61■■□□□ 1.37
CDH5-202ENST00000539168 SLC26A6Q9BXS9 759 aa23.61■■□□□ 1.37
CDH5-202ENST00000539168 ZNF277Q9NRM2 450 aaPredicted RBP23.61■■□□□ 1.37
CDH5-202ENST00000539168 FIBPO43427 364 aa23.6■■□□□ 1.37
CDH5-202ENST00000539168 GABPAQ06546 454 aa23.6■■□□□ 1.37
CDH5-202ENST00000539168 RBM27Q9P2N5 1060 aaKnown RBP23.6■■□□□ 1.37
CDH5-202ENST00000539168 GNAQP50148 359 aa23.6■■□□□ 1.37
CDH5-202ENST00000539168 SLC4A8Q2Y0W8 1093 aa23.6■■□□□ 1.37
CDH5-202ENST00000539168 OGFOD1Q8N543 542 aa23.6■■□□□ 1.37
CDH5-202ENST00000539168 AGBL3Q8NEM8 1001 aa23.6■■□□□ 1.37
CDH5-202ENST00000539168 SERPINB13Q9UIV8 391 aa23.6■■□□□ 1.37
CDH5-202ENST00000539168 PLIN4Q96Q06 1357 aa23.6■■□□□ 1.37
CDH5-202ENST00000539168 XBP1P17861 261 aa23.59■■□□□ 1.37
CDH5-202ENST00000539168 RCSD1Q6JBY9 416 aa23.59■■□□□ 1.37
CDH5-202ENST00000539168 JDP2Q8WYK2 163 aa23.59■■□□□ 1.37
CDH5-202ENST00000539168 PHKBQ93100 1093 aa23.59■■□□□ 1.37
CDH5-202ENST00000539168 CHAMP1Q96JM3 812 aa23.59■■□□□ 1.37
CDH5-202ENST00000539168 DDX4Q9NQI0 724 aaKnown RBP23.59■■□□□ 1.37
CDH5-202ENST00000539168 LTBP3Q9NS15 1303 aa23.59■■□□□ 1.37
CDH5-202ENST00000539168 FER1L6Q2WGJ9 1857 aa23.58■■□□□ 1.37
CDH5-202ENST00000539168 NBPF11Q86T75 865 aa23.58■■□□□ 1.37
CDH5-202ENST00000539168 IL17RBQ9NRM6 502 aa23.58■■□□□ 1.37
CDH5-202ENST00000539168 COL2A1P02458 1487 aaPredicted RBP23.58■■□□□ 1.36
CDH5-202ENST00000539168 PRPF3O43395 683 aaKnown RBP23.57■■□□□ 1.36
CDH5-202ENST00000539168 ENTPD3O75355 529 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 CFAP100Q494V2 611 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 SLC44A5Q8NCS7 719 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 GPT2Q8TD30 523 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 SPATA32Q96LK8 384 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 GDPD2Q9HCC8 539 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 TMOD2Q9NZR1 351 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 PPP1R1BQ9UD71 204 aaPredicted RBP23.57■■□□□ 1.36
CDH5-202ENST00000539168 NMT2O60551 498 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 SAFBQ15424 915 aaKnown RBP eCLIP23.57■■□□□ 1.36
CDH5-202ENST00000539168 TMTC3Q6ZXV5 915 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 KLHL34Q8N239 644 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 PNMA1Q8ND90 353 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 CCDC17Q96LX7 622 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 GMLQ99445 158 aa23.57■■□□□ 1.36
CDH5-202ENST00000539168 PSMD14O00487 310 aa23.56■■□□□ 1.36
CDH5-202ENST00000539168 PTGER2P43116 358 aa23.56■■□□□ 1.36
CDH5-202ENST00000539168 KRT40Q6A162 431 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms