RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 MRFAP1Q9Y605 127 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 THSD7BQ9C0I4 1608 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 ITIH6Q6UXX5 1313 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 PCDH11XQ9BZA7 1347 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 PCDH11YQ9BZA8 1340 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 SALL1Q9NSC2 1324 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 TARSL2A2RTX5 802 aaKnown RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 CTAGE15A4D2H0 777 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 AKR1B15C9JRZ8 316 aaPredicted RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 MAP2K7O14733 419 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 AOC2O75106 756 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 IPO7O95373 1038 aaKnown RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 CTAGE8P0CG41 777 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 FBLN1P23142 703 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 PDIA3P30101 505 aaKnown RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 VASPP50552 380 aaPredicted RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 CHMP4BP1P59074 171 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 ITPK1Q13572 414 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 SART3Q15020 963 aaKnown RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 KIF4BQ2VIQ3 1234 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 RABL6Q3YEC7 729 aaPredicted RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 TNNI3KQ59H18 835 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 RILPL1Q5EBL4 403 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 DNAJC21Q5F1R6 531 aaKnown RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 AXDND1Q5T1B0 1012 aaPredicted RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 MYSM1Q5VVJ2 828 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 KRBA2Q6ZNG9 492 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 MICALCLQ6ZW33 695 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 CTAGE6Q86UF2 777 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 CTAGE4Q8IX94 777 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 TRIM22Q8IYM9 498 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 TTLL6Q8N841 843 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 CNNM3Q8NE01 707 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 RAPGEF4Q8WZA2 1011 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 PIGBQ92521 554 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 ARHGEF1Q92888 912 aaKnown RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 EAF2Q96CJ1 260 aaPredicted RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 CHAMP1Q96JM3 812 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 FAM227BQ96M60 508 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 USP28Q96RU2 1077 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 METTL22Q9BUU2 404 aaPredicted RBP6.62□□□□□ -1.35
CHD4-206ENST00000536999 CNNM2Q9H8M5 875 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 CDC23Q9UJX2 597 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 ADAM21Q9UKJ8 722 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 FPGT-TNNI3KV9GXZ4 949 aa6.62□□□□□ -1.35
CHD4-206ENST00000536999 FAM208AQ9UK61 1670 aaKnown RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 MRC1P22897 1456 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 HEG1Q9ULI3 1381 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 STK36Q9NRP7 1315 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 A0A0D9SFI3 127 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 ZNF213O14771 459 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 RNF113AO15541 343 aaKnown RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 SASH1O94885 1247 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 CYP21A2P08686 494 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 CAPN2P17655 700 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 OAS2P29728 719 aaKnown RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 PLA2G4AP47712 749 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 KRT83P78385 493 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 IRX3P78415 501 aaPredicted RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 APBA1Q02410 837 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 RAD51AP2Q09MP3 1159 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 ST3GAL1Q11201 340 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 STK3Q13188 491 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 GCKRQ14397 625 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 TAF7LQ5H9L4 462 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 ZMYM1Q5SVZ6 1142 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 NT5DC1Q5TFE4 455 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 ARMCX5Q6P1M9 558 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 WDR93Q6P2C0 686 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 ZNF530Q6P9A1 599 aaPredicted RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 ZNF662Q6ZS27 426 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 ANKRD13DQ6ZTN6 518 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 C11orf57Q6ZUT1 292 aaPredicted RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 B4GALNT4Q76KP1 1039 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 RSRC2Q7L4I2 434 aaKnown RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 CCDC91Q7Z6B0 441 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 PNMA8AQ86V59 439 aaPredicted RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 FAM177A1Q8N128 213 aaPredicted RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 KRI1Q8N9T8 703 aaKnown RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 CCDC191Q8NCU4 936 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 MSANTD4Q8NCY6 345 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.61□□□□□ -1.35
CHD4-206ENST00000536999 PAG1Q9NWQ8 432 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 RMND1Q9NWS8 449 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 FEZ2Q9UHY8 353 aaPredicted RBP6.61□□□□□ -1.35
CHD4-206ENST00000536999 HACL1Q9UJ83 578 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 LTN1O94822 1766 aa6.61□□□□□ -1.35
CHD4-206ENST00000536999 PITPNM2Q9BZ72 1349 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 ERICH4A6NGS2 130 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 NEURL1BA8MQ27 555 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 E7EWF7 191 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 GOLIM4O00461 696 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 RNMTO43148 476 aaKnown RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 OPA1O60313 960 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 MYL1P05976 194 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 SNRPA1P09661 255 aaKnown RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 TATP17735 454 aaPredicted RBP6.6□□□□□ -1.35
CHD4-206ENST00000536999 EPHX2P34913 555 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 NDUFA8P51970 172 aa6.6□□□□□ -1.35
CHD4-206ENST00000536999 DDR1Q08345 913 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms