RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 CCDC8Q9H0W5 538 aaPredicted RBP22.12■■□□□ 1.13
UBXN1-216ENST00000533908 AS3MTQ9HBK9 375 aa22.12■■□□□ 1.13
UBXN1-216ENST00000533908 TXNRD2Q9NNW7 524 aa22.12■■□□□ 1.13
UBXN1-216ENST00000533908 SAP30BPQ9UHR5 308 aaKnown RBP22.12■■□□□ 1.13
UBXN1-216ENST00000533908 RANBP2P49792 3224 aaKnown RBP22.12■■□□□ 1.13
UBXN1-216ENST00000533908 GDF11O95390 407 aa22.11■■□□□ 1.13
UBXN1-216ENST00000533908 ASNSP08243 561 aa22.11■■□□□ 1.13
UBXN1-216ENST00000533908 PLCG2P16885 1265 aa22.11■■□□□ 1.13
UBXN1-216ENST00000533908 HOXA7P31268 230 aaPredicted RBP22.11■■□□□ 1.13
UBXN1-216ENST00000533908 DIS3LQ8TF46 1054 aaKnown RBP22.11■■□□□ 1.13
UBXN1-216ENST00000533908 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.11■■□□□ 1.13
UBXN1-216ENST00000533908 NR2E3Q9Y5X4 410 aa22.11■■□□□ 1.13
UBXN1-216ENST00000533908 PLXNB2O15031 1838 aa22.1■■□□□ 1.13
UBXN1-216ENST00000533908 RBPJLQ9UBG7 517 aa22.1■■□□□ 1.13
UBXN1-216ENST00000533908 NDUFB9Q9Y6M9 179 aa22.1■■□□□ 1.13
UBXN1-216ENST00000533908 MAST2Q6P0Q8 1798 aa22.1■■□□□ 1.13
UBXN1-216ENST00000533908 HMGCRP04035 888 aa22.09■■□□□ 1.13
UBXN1-216ENST00000533908 CYP7A1P22680 504 aa22.09■■□□□ 1.13
UBXN1-216ENST00000533908 MNX1P50219 401 aaPredicted RBP22.09■■□□□ 1.13
UBXN1-216ENST00000533908 Q3C1V9 767 aa22.09■■□□□ 1.13
UBXN1-216ENST00000533908 CRACR2BQ8N4Y2 399 aaPredicted RBP22.09■■□□□ 1.13
UBXN1-216ENST00000533908 EMILIN3Q9NT22 766 aa22.09■■□□□ 1.13
UBXN1-216ENST00000533908 SZT2Q5T011 3432 aa22.09■■□□□ 1.13
UBXN1-216ENST00000533908 FOCADQ5VW36 1801 aa22.08■■□□□ 1.13
UBXN1-216ENST00000533908 C19orf81C9J6K1 198 aa22.08■■□□□ 1.13
UBXN1-216ENST00000533908 EVI5O60447 810 aa22.08■■□□□ 1.13
UBXN1-216ENST00000533908 IRX3P78415 501 aaPredicted RBP22.08■■□□□ 1.13
UBXN1-216ENST00000533908 TRIB2Q92519 343 aa22.08■■□□□ 1.13
UBXN1-216ENST00000533908 ANTXR1Q9H6X2 564 aa22.08■■□□□ 1.13
UBXN1-216ENST00000533908 TMOD4Q9NZQ9 345 aa22.08■■□□□ 1.13
UBXN1-216ENST00000533908 ZBTB21Q9ULJ3 1066 aa22.08■■□□□ 1.13
UBXN1-216ENST00000533908 USP17L10C9JJH3 530 aa22.07■■□□□ 1.12
UBXN1-216ENST00000533908 CAPN2P17655 700 aa22.07■■□□□ 1.12
UBXN1-216ENST00000533908 CYP2B6P20813 491 aa22.07■■□□□ 1.12
UBXN1-216ENST00000533908 HERVK_113P62684 666 aa22.07■■□□□ 1.12
UBXN1-216ENST00000533908 MIGA1Q8NAN2 632 aa22.07■■□□□ 1.12
UBXN1-216ENST00000533908 RPTORQ8N122 1335 aa22.06■■□□□ 1.12
UBXN1-216ENST00000533908 ALPK3Q96L96 1907 aa22.06■■□□□ 1.12
UBXN1-216ENST00000533908 IDH1O75874 414 aaKnown RBP22.06■■□□□ 1.12
UBXN1-216ENST00000533908 ITPRIPQ8IWB1 547 aa22.06■■□□□ 1.12
UBXN1-216ENST00000533908 GPRC5AQ8NFJ5 357 aa22.06■■□□□ 1.12
UBXN1-216ENST00000533908 HMX1Q9NP08 348 aaPredicted RBP22.06■■□□□ 1.12
UBXN1-216ENST00000533908 STAP2Q9UGK3 403 aa22.06■■□□□ 1.12
UBXN1-216ENST00000533908 NECAB2Q7Z6G3 386 aa22.05■■□□□ 1.12
UBXN1-216ENST00000533908 PORCNQ9H237 461 aa22.05■■□□□ 1.12
UBXN1-216ENST00000533908 GINM1Q9NU53 330 aa22.05■■□□□ 1.12
UBXN1-216ENST00000533908 IGSF3O75054 1194 aa22.04■■□□□ 1.12
UBXN1-216ENST00000533908 GH2P01242 217 aa22.04■■□□□ 1.12
UBXN1-216ENST00000533908 MAP3K21Q5TCX8 1036 aa22.04■■□□□ 1.12
UBXN1-216ENST00000533908 TATDN1Q6P1N9 297 aa22.04■■□□□ 1.12
UBXN1-216ENST00000533908 CEP85Q6P2H3 762 aa22.04■■□□□ 1.12
UBXN1-216ENST00000533908 MAGEB6Q8N7X4 407 aa22.04■■□□□ 1.12
UBXN1-216ENST00000533908 USP6NLQ92738 828 aa22.04■■□□□ 1.12
UBXN1-216ENST00000533908 TRIM34Q9BYJ4 488 aa22.04■■□□□ 1.12
UBXN1-216ENST00000533908 FTSJ3Q8IY81 847 aaKnown RBP22.03■■□□□ 1.12
UBXN1-216ENST00000533908 ANKLE1Q8NAG6 615 aa22.03■■□□□ 1.12
UBXN1-216ENST00000533908 SOX1O00570 391 aaPredicted RBP22.02■■□□□ 1.12
UBXN1-216ENST00000533908 HLA-DOAP06340 250 aa22.02■■□□□ 1.12
UBXN1-216ENST00000533908 HNRNPUQ00839 825 aaKnown RBP eCLIP22.02■■□□□ 1.12
UBXN1-216ENST00000533908 USP17L2Q6R6M4 530 aa22.02■■□□□ 1.12
UBXN1-216ENST00000533908 NUDT12Q9BQG2 462 aa22.02■■□□□ 1.12
UBXN1-216ENST00000533908 EXOC6BQ9Y2D4 811 aa22.02■■□□□ 1.12
UBXN1-216ENST00000533908 CNMDO75829 334 aa22.01■■□□□ 1.11
UBXN1-216ENST00000533908 XRCC5P13010 732 aaKnown RBP22.01■■□□□ 1.11
UBXN1-216ENST00000533908 PRKAR2AP13861 404 aaKnown RBP22.01■■□□□ 1.11
UBXN1-216ENST00000533908 USP5P45974 858 aa22.01■■□□□ 1.11
UBXN1-216ENST00000533908 ERVK-9P63128 1117 aa22.01■■□□□ 1.11
UBXN1-216ENST00000533908 ERVK-24P63145 666 aa22.01■■□□□ 1.11
UBXN1-216ENST00000533908 CCL14Q16627 93 aa22.01■■□□□ 1.11
UBXN1-216ENST00000533908 PAGR1Q9BTK6 254 aa22.01■■□□□ 1.11
UBXN1-216ENST00000533908 OGDHLQ9ULD0 1010 aa22.01■■□□□ 1.11
UBXN1-216ENST00000533908 MYH1P12882 1939 aa22.01■■□□□ 1.11
UBXN1-216ENST00000533908 PLCD1P51178 756 aa22■■□□□ 1.11
UBXN1-216ENST00000533908 EVX2Q03828 476 aa22■■□□□ 1.11
UBXN1-216ENST00000533908 ZYXQ15942 572 aaKnown RBP22■■□□□ 1.11
UBXN1-216ENST00000533908 MORN1Q5T089 497 aa22■■□□□ 1.11
UBXN1-216ENST00000533908 C7orf61Q8IZ16 206 aa22■■□□□ 1.11
UBXN1-216ENST00000533908 ACER1Q8TDN7 264 aa22■■□□□ 1.11
UBXN1-216ENST00000533908 PANK1Q8TE04 598 aa22■■□□□ 1.11
UBXN1-216ENST00000533908 NBPF3Q9H094 633 aa22■■□□□ 1.11
UBXN1-216ENST00000533908 MAPK4P31152 587 aa21.99■■□□□ 1.11
UBXN1-216ENST00000533908 CACNB2Q08289 660 aaPredicted RBP21.99■■□□□ 1.11
UBXN1-216ENST00000533908 GPR142Q7Z601 462 aa21.99■■□□□ 1.11
UBXN1-216ENST00000533908 AACSQ86V21 672 aa21.99■■□□□ 1.11
UBXN1-216ENST00000533908 C12orf42Q96LP6 360 aa21.99■■□□□ 1.11
UBXN1-216ENST00000533908 GDF15Q99988 308 aa21.99■■□□□ 1.11
UBXN1-216ENST00000533908 RIOK1Q9BRS2 568 aaKnown RBP21.99■■□□□ 1.11
UBXN1-216ENST00000533908 EHD4Q9H223 541 aa21.99■■□□□ 1.11
UBXN1-216ENST00000533908 SERPINB13Q9UIV8 391 aa21.99■■□□□ 1.11
UBXN1-216ENST00000533908 ZMYND8Q9ULU4 1186 aaPredicted RBP21.99■■□□□ 1.11
UBXN1-216ENST00000533908 GUCY1A2P33402 732 aa21.98■■□□□ 1.11
UBXN1-216ENST00000533908 SHMT1P34896 483 aa21.98■■□□□ 1.11
UBXN1-216ENST00000533908 PLEKHH3Q7Z736 793 aa21.98■■□□□ 1.11
UBXN1-216ENST00000533908 MIER1Q8N108 512 aa21.98■■□□□ 1.11
UBXN1-216ENST00000533908 SOCS4Q8WXH5 440 aa21.98■■□□□ 1.11
UBXN1-216ENST00000533908 LRCH3Q96II8 777 aa21.98■■□□□ 1.11
UBXN1-216ENST00000533908 IL1RAPL2Q9NP60 686 aa21.98■■□□□ 1.11
UBXN1-216ENST00000533908 DDX60LQ5H9U9 1706 aaKnown RBP21.97■■□□□ 1.11
UBXN1-216ENST00000533908 A0A1W2PPC1 479 aa21.97■■□□□ 1.11
UBXN1-216ENST00000533908 USP17L15C9J2P7 530 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms