RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 GOLGA6L1Q8N7Z2 621 aa17.86■□□□□ 0.45
PPFIA1-222ENST00000532504 CETN1Q12798 172 aa17.86■□□□□ 0.45
PPFIA1-222ENST00000532504 BRAPQ7Z569 592 aa17.86■□□□□ 0.45
PPFIA1-222ENST00000532504 TOP1P11387 765 aaKnown RBP17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 FAM173BQ6P4H8 233 aa17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 SLC10A4Q96EP9 437 aa17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 PI4KBQ9UBF8 816 aa17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 USP42Q9H9J4 1324 aaKnown RBP17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 ADD1P35611 737 aaKnown RBP17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 GIMAP6Q6P9H5 292 aa17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 ZNF397Q8NF99 534 aaPredicted RBP17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 CCDC17Q96LX7 622 aa17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 MROH1Q8NDA8 1641 aa17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 IREB2P48200 963 aaKnown RBP17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 NONOQ15233 471 aaKnown RBP eCLIP17.85■□□□□ 0.458e-7■■■■□ 21.3
PPFIA1-222ENST00000532504 INTS5Q6P9B9 1019 aaKnown RBP17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 SH3RF3Q8TEJ3 882 aaPredicted RBP17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 SMCO2A6NFE2 343 aa17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 POTEJP0CG39 1038 aa17.85■□□□□ 0.45
PPFIA1-222ENST00000532504 FAM196BA6NMK8 535 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 CCT6AP40227 531 aaKnown RBP17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 PUF60Q9UHX1 559 aaKnown RBP17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 NCAPH2Q6IBW4 605 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 KCTD1Q719H9 257 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 GRPEL1Q9HAV7 217 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 DACT1Q9NYF0 836 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 TESPA1A2RU30 521 aaPredicted RBP17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 NCBP1Q09161 790 aaKnown RBP17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 FANCBQ8NB91 859 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 SLC16A10Q8TF71 515 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 GLT8D2Q9H1C3 349 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 DHX36Q9H2U1 1008 aaKnown RBP17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 MYCP01106 439 aaPredicted RBP17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 KRT40Q6A162 431 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 REXO1Q8N1G1 1221 aaKnown RBP17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 SWAP70Q9UH65 585 aa17.84■□□□□ 0.45
PPFIA1-222ENST00000532504 MAEAQ7L5Y9 396 aa17.83■□□□□ 0.45
PPFIA1-222ENST00000532504 TBC1D16Q8TBP0 767 aa17.83■□□□□ 0.45
PPFIA1-222ENST00000532504 GPKOWQ92917 476 aaPredicted RBP eCLIP17.83■□□□□ 0.45
PPFIA1-222ENST00000532504 DNAI2Q9GZS0 605 aa17.83■□□□□ 0.45
PPFIA1-222ENST00000532504 CYP2E1P05181 493 aaPredicted RBP17.83■□□□□ 0.44
PPFIA1-222ENST00000532504 CCPG1Q9ULG6 757 aa17.83■□□□□ 0.44
PPFIA1-222ENST00000532504 CRAMP1Q96RY5 1269 aa17.83■□□□□ 0.44
PPFIA1-222ENST00000532504 NAP1L4Q99733 375 aaKnown RBP17.83■□□□□ 0.44
PPFIA1-222ENST00000532504 SLC16A2P36021 539 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 PPP2R5BQ15173 497 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 FAM84BQ96KN1 310 aaPredicted RBP17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 RMND1Q9NWS8 449 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 REREQ9P2R6 1566 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 PPLO60437 1756 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 PHACTR2O75167 634 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 HARSP12081 509 aaKnown RBP17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 RILPL1Q5EBL4 403 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 ARHGEF16Q5VV41 709 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 FBXO11Q86XK2 927 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 NTSR2O95665 410 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 STX1AQ16623 288 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 GRIPAP1Q4V328 841 aa17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 ZBTB12Q9Y330 459 aaPredicted RBP17.82■□□□□ 0.44
PPFIA1-222ENST00000532504 GYS1P13807 737 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 DESP17661 470 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 TDRD12Q587J7 1177 aaKnown RBP17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 KRT26Q7Z3Y9 468 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 PSTPIP2Q9H939 334 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 KANSL2Q9H9L4 492 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 SLC5A4Q9NY91 659 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 MYO3BQ8WXR4 1341 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 IQGAP1P46940 1657 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 CYP21A2P08686 494 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 SPECC1Q5M775 1068 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 TTC38Q5R3I4 469 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 KRT25Q7Z3Z0 450 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 C2orf69Q8N8R5 385 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 TTLL1O95922 423 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 LLPHQ9BRT6 129 aaKnown RBP17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 AZI2Q9H6S1 392 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 ME3Q16798 604 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 DRC1Q96MC2 740 aa17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 NUP88Q99567 741 aaPredicted RBP17.81■□□□□ 0.44
PPFIA1-222ENST00000532504 ZNF165P49910 485 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 KIAA1328Q86T90 577 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 CYP2D6P10635 497 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 DPP9Q86TI2 863 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 ZNRF3Q9ULT6 936 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 GRIN3BO60391 1043 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 CCDC181Q5TID7 509 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 CCDC125Q86Z20 511 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 MTX1Q13505 466 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 PCDHA1Q9Y5I3 950 aa17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 COL5A2P05997 1499 aaPredicted RBP17.8■□□□□ 0.44
PPFIA1-222ENST00000532504 MED23Q9ULK4 1368 aa17.79■□□□□ 0.44
PPFIA1-222ENST00000532504 FAM47CQ5HY64 1035 aa17.79■□□□□ 0.44
PPFIA1-222ENST00000532504 MAP4K1Q92918 833 aa17.79■□□□□ 0.44
PPFIA1-222ENST00000532504 LSG1Q9H089 658 aaKnown RBP17.79■□□□□ 0.44
PPFIA1-222ENST00000532504 MRPL11Q9Y3B7 192 aaKnown RBP17.79■□□□□ 0.44
PPFIA1-222ENST00000532504 PLEKHG2Q9H7P9 1386 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms