RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	PPARA	Q07869	468 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	ME3	Q16798	604 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	SBK1	Q52WX2	424 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	BRAP	Q7Z569	592 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	TTC6	Q86TZ1	520 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	SGMS1	Q86VZ5	419 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	COL23A1	Q86Y22	540 aa	Predicted RBP	7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	ZNF622	Q969S3	477 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	NSUN4	Q96CB9	384 aa	Known RBP	7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	MRI	Q9BWK5	157 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	IL25	Q9H293	177 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	ARMT1	Q9H993	441 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	CD209	Q9NNX6	404 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	TPCN1	Q9ULQ1	816 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	NDUFB9	Q9Y6M9	179 aa		7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718		V9GY48	417 aa	Predicted RBP	7.3	□□□□□ -1.24
PABPC4-222	ENST00000527718	FAM205A	Q6ZU69	1335 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	SRCAP	Q6ZRS2	3230 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	KLF18	A0A0U1RQI7	1052 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	GFRA3	O60609	400 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	DDAH1	O94760	285 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	POLR3D	P05423	398 aa	Predicted RBP	7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	HLA-DOA	P06340	250 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	HDLBP	Q00341	1268 aa	Known RBP	7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	MECOM	Q03112	1051 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	SSRP1	Q08945	709 aa	Known RBP	7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	TOB2	Q14106	344 aa	Predicted RBP	7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	SMIM5	Q71RC9	77 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	AMIGO3	Q86WK7	504 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	C2CD5	Q86YS7	1000 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	MB21D2	Q8IYB1	491 aa	Predicted RBP	7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	ZNF444	Q8N0Y2	327 aa	Predicted RBP	7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	TBC1D16	Q8TBP0	767 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	LZTS2	Q9BRK4	669 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	TRIM34	Q9BYJ4	488 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	MKNK2	Q9HBH9	465 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	TSKS	Q9UJT2	592 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	CEP131	Q9UPN4	1083 aa		7.29	□□□□□ -1.24
PABPC4-222	ENST00000527718	MROH7-TTC4	A0A0A0MT08	1334 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	ELP1	O95163	1332 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	STK36	Q9NRP7	1315 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	TSPY2	A6NKD2	308 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	GOLGA8A	A7E2F4	631 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	GSG1L2	A8MUP6	293 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	MINDY4B	A8MYZ0	360 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	ORC4	O43929	436 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	ZBTB7A	O95365	584 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	CAVIN2	O95810	425 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	BMP15	O95972	392 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	PDIA3	P30101	505 aa	Known RBP	7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	IARS	P41252	1262 aa	Known RBP	7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	MRE11	P49959	708 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	HAND2	P61296	217 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	GPSM2	P81274	684 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	STK3	Q13188	491 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	ZRSR1	Q15695	479 aa	Known RBP	7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	MFSD14B	Q5SR56	506 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	IFIT1B	Q5T764	474 aa	Known RBP	7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	PI16	Q6UXB8	463 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	TMEM87A	Q8NBN3	555 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	CTCFL	Q8NI51	663 aa	Predicted RBP	7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	SMARCC2	Q8TAQ2	1214 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	TEKT1	Q969V4	418 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	C8orf76	Q96K31	380 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	MAP3K14	Q99558	947 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	RIOK1	Q9BRS2	568 aa	Known RBP	7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	TMOD2	Q9NZR1	351 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	SWAP70	Q9UH65	585 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	HOOK1	Q9UJC3	728 aa	Known RBP	7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	HDAC9	Q9UKV0	1011 aa		7.28	□□□□□ -1.24
PABPC4-222	ENST00000527718	PTPDC1	A2A3K4	754 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	SH2B2	O14492	632 aa	Predicted RBP	7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	DPYSL4	O14531	572 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	RANBP6	O60518	1105 aa	Known RBP	7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	KDM4A	O75164	1064 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	PRPF40A	O75400	957 aa	Known RBP	7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	DEXI	O95424	95 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	TGFB2	P61812	414 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	DDR1	Q08345	913 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	APOBR	Q0VD83	1088 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	TRAF1	Q13077	416 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	SF3A1	Q15459	793 aa	Known RBP	7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	RTN1	Q16799	776 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	CCDC93	Q567U6	631 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	RRP12	Q5JTH9	1297 aa	Known RBP	7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	STRIP1	Q5VSL9	837 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	HHIPL2	Q6UWX4	724 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	DGKH	Q86XP1	1220 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	DHX37	Q8IY37	1157 aa	Known RBP	7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	TEX11	Q8IYF3	940 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	LCORL	Q8N3X6	602 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	TTLL6	Q8N841	843 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	MIGA1	Q8NAN2	632 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	KCNG4	Q8TDN1	519 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	CCDC12	Q8WUD4	166 aa	Predicted RBP	7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	MTFR1L	Q9H019	292 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	DHX36	Q9H2U1	1008 aa	Known RBP	7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	KAT14	Q9H8E8	782 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	SPON1	Q9HCB6	807 aa		7.27	□□□□□ -1.25
PABPC4-222	ENST00000527718	MCM9	Q9NXL9	1143 aa		7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms