RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 KRT40Q6A162 431 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 KLHL10Q6JEL2 608 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 IQCA1Q86XH1 822 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 FBXO38Q6PIJ6 1188 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 MNS1Q8NEH6 495 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 ZSWIM5Q9P217 1185 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 STX8Q9UNK0 236 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 COL22A1Q8NFW1 1626 aaPredicted RBP11.26□□□□□ -0.61
USP35-201ENST00000526425 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
USP35-201ENST00000526425 CARMIL3Q8ND23 1372 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 ZNF274Q96GC6 653 aaPredicted RBP11.26□□□□□ -0.61
USP35-201ENST00000526425 LLPHQ9BRT6 129 aaKnown RBP11.26□□□□□ -0.61
USP35-201ENST00000526425 NAT10Q9H0A0 1025 aaKnown RBP11.26□□□□□ -0.61
USP35-201ENST00000526425 VAT1LQ9HCJ6 419 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 BRMS1Q9HCU9 246 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 MCM9Q9NXL9 1143 aa11.26□□□□□ -0.61
USP35-201ENST00000526425 SAP30BPQ9UHR5 308 aaKnown RBP11.26□□□□□ -0.61
USP35-201ENST00000526425 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 NRDCO43847 1150 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 IFIT1BQ5T764 474 aaKnown RBP11.25□□□□□ -0.61
USP35-201ENST00000526425 JMYQ8N9B5 988 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 CLSTN2Q9H4D0 955 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 NEDD4P46934 1319 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 USP17L12C9JPN9 530 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 USP17L21D6R901 530 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 CAND2O75155 1236 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 CTDNEP1O95476 244 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 XBP1P17861 261 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 LRMPQ12912 555 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 AKNAD1Q5T1N1 836 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 NAIF1Q69YI7 327 aaPredicted RBP11.25□□□□□ -0.61
USP35-201ENST00000526425 CLIC6Q96NY7 704 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 STRBPQ96SI9 672 aaKnown RBP11.25□□□□□ -0.61
USP35-201ENST00000526425 KRT23Q9C075 422 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 SERPINC1P01008 464 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
USP35-201ENST00000526425 PACS2Q86VP3 889 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 ESR2Q92731 530 aa11.25□□□□□ -0.61
USP35-201ENST00000526425 RNF41Q9H4P4 317 aaPredicted RBP11.25□□□□□ -0.61
USP35-201ENST00000526425 HIBADHP31937 336 aaKnown RBP11.24□□□□□ -0.61
USP35-201ENST00000526425 SYKP43405 635 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 PTPN21Q16825 1174 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 APOA5Q6Q788 366 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 CATIPQ7Z7H3 387 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 ANO10Q9NW15 660 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 STX1AQ16623 288 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 FAM177A1Q8N128 213 aaPredicted RBP11.24□□□□□ -0.61
USP35-201ENST00000526425 CNNM3Q8NE01 707 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 SMARCE1Q969G3 411 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 CPSF2Q9P2I0 782 aaKnown RBP11.24□□□□□ -0.61
USP35-201ENST00000526425 PLCH1Q4KWH8 1693 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 LRP6O75581 1613 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 EXOSC10Q01780 885 aaKnown RBP11.24□□□□□ -0.61
USP35-201ENST00000526425 UBE3CQ15386 1083 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 TXNRD1Q16881 649 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 UVSSAQ2YD98 709 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
USP35-201ENST00000526425 BTBD18B2RXH4 712 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 SMIM22K7EJ46 135 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 FBXO18Q8NFZ0 1043 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 CTCFLQ8NI51 663 aaPredicted RBP11.23□□□□□ -0.61
USP35-201ENST00000526425 ANKRD2Q9GZV1 360 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 CABP5Q9NP86 173 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 ZNF446Q9NWS9 450 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 V9GY48 417 aaPredicted RBP11.23□□□□□ -0.61
USP35-201ENST00000526425 AFMP43652 599 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 NDUFA8P51970 172 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 ANTXR2P58335 489 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 SLC27A3Q5K4L6 730 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 ARMCX6Q7L4S7 300 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 DIS3L2Q8IYB7 885 aaKnown RBP11.23□□□□□ -0.61
USP35-201ENST00000526425 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 VPS54Q9P1Q0 977 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 ADRA2BP18089 450 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 CDC27P30260 824 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 FAM160A1Q05DH4 1040 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 PPARAQ07869 468 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 TSGA10IPQ3SY00 556 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 KCNG4Q8TDN1 519 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 KCNB2Q92953 911 aa11.23□□□□□ -0.61
USP35-201ENST00000526425 KLRK1P26718 216 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 PICALMQ13492 652 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 NFIXQ14938 502 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 MB21D2Q8IYB1 491 aaPredicted RBP11.22□□□□□ -0.61
USP35-201ENST00000526425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.22□□□□□ -0.61
USP35-201ENST00000526425 CRNKL1Q9BZJ0 848 aaKnown RBP11.22□□□□□ -0.61
USP35-201ENST00000526425 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 MARCH6O60337 910 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 PEX19P40855 299 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 NLRP5P59047 1200 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 SETQ01105 290 aaPredicted RBP11.22□□□□□ -0.61
USP35-201ENST00000526425 ERCC6LQ2NKX8 1250 aa11.22□□□□□ -0.61
USP35-201ENST00000526425 CFAP100Q494V2 611 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms