RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 BACE1P56817 501 aa21.82■■□□□ 1.08
PVT1-220ENST00000524165 SNX17Q15036 470 aa21.82■■□□□ 1.08
PVT1-220ENST00000524165 ADAMTS19Q8TE59 1207 aa21.82■■□□□ 1.08
PVT1-220ENST00000524165 EDC3Q96F86 508 aaKnown RBP21.82■■□□□ 1.08
PVT1-220ENST00000524165 ARIH1Q9Y4X5 557 aaPredicted RBP21.82■■□□□ 1.08
PVT1-220ENST00000524165 SYNGAP1Q96PV0 1343 aa21.81■■□□□ 1.08
PVT1-220ENST00000524165 EYA2O00167 538 aa21.81■■□□□ 1.08
PVT1-220ENST00000524165 BTDP43251 543 aa21.81■■□□□ 1.08
PVT1-220ENST00000524165 MTMR2Q13614 643 aa21.81■■□□□ 1.08
PVT1-220ENST00000524165 DZIP1Q86YF9 867 aaKnown RBP21.81■■□□□ 1.08
PVT1-220ENST00000524165 RNPC3Q96LT9 517 aaKnown RBP21.81■■□□□ 1.08
PVT1-220ENST00000524165 PDLIM7Q9NR12 457 aa21.81■■□□□ 1.08
PVT1-220ENST00000524165 MYO9BQ13459 2157 aa21.81■■□□□ 1.08
PVT1-220ENST00000524165 CNGA1P29973 690 aa21.8■■□□□ 1.08
PVT1-220ENST00000524165 ARRDC4Q8NCT1 418 aa21.8■■□□□ 1.08
PVT1-220ENST00000524165 FLRT1Q9NZU1 646 aa21.8■■□□□ 1.08
PVT1-220ENST00000524165 THEGQ9P2T0 379 aa21.8■■□□□ 1.08
PVT1-220ENST00000524165 C19orf81C9J6K1 198 aa21.79■■□□□ 1.08
PVT1-220ENST00000524165 GLRX3O76003 335 aaKnown RBP21.79■■□□□ 1.08
PVT1-220ENST00000524165 RHBDL3P58872 404 aa21.79■■□□□ 1.08
PVT1-220ENST00000524165 EXOSC9Q06265 439 aaKnown RBP21.79■■□□□ 1.08
PVT1-220ENST00000524165 RRP1BQ14684 758 aaKnown RBP21.79■■□□□ 1.08
PVT1-220ENST00000524165 UHRF1Q96T88 793 aaPredicted RBP21.79■■□□□ 1.08
PVT1-220ENST00000524165 MROH7-TTC4A0A0A0MT08 1334 aa21.79■■□□□ 1.08
PVT1-220ENST00000524165 GPR75-ASB3A0A0A6YYF3 556 aa21.78■■□□□ 1.08
PVT1-220ENST00000524165 TRIM43BA6NCK2 446 aa21.78■■□□□ 1.08
PVT1-220ENST00000524165 DNAJB2P25686 324 aa21.78■■□□□ 1.08
PVT1-220ENST00000524165 TRIM60Q495X7 471 aa21.78■■□□□ 1.08
PVT1-220ENST00000524165 NCBP3Q53F19 620 aaKnown RBP21.78■■□□□ 1.08
PVT1-220ENST00000524165 GJC2Q5T442 439 aaPredicted RBP21.78■■□□□ 1.08
PVT1-220ENST00000524165 C1orf53Q5VUE5 145 aa21.78■■□□□ 1.08
PVT1-220ENST00000524165 TRIM43Q96BQ3 446 aaPredicted RBP21.78■■□□□ 1.08
PVT1-220ENST00000524165 C1QTNF1Q9BXJ1 281 aa21.78■■□□□ 1.08
PVT1-220ENST00000524165 ZNF576Q9H609 170 aa21.78■■□□□ 1.08
PVT1-220ENST00000524165 CWC22Q9HCG8 908 aaKnown RBP21.78■■□□□ 1.08
PVT1-220ENST00000524165 HERC5Q9UII4 1024 aaKnown RBP21.78■■□□□ 1.08
PVT1-220ENST00000524165 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.77■■□□□ 1.08
PVT1-220ENST00000524165 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.77■■□□□ 1.08
PVT1-220ENST00000524165 KBTBD13C9JR72 458 aa21.77■■□□□ 1.08
PVT1-220ENST00000524165 MAP4K4O95819 1239 aaPredicted RBP21.77■■□□□ 1.08
PVT1-220ENST00000524165 HOXC6P09630 235 aa21.77■■□□□ 1.08
PVT1-220ENST00000524165 MRPS5P82675 430 aaKnown RBP21.77■■□□□ 1.08
PVT1-220ENST00000524165 ATP2B3Q16720 1220 aa21.77■■□□□ 1.08
PVT1-220ENST00000524165 AKNAD1Q5T1N1 836 aa21.77■■□□□ 1.08
PVT1-220ENST00000524165 SH3RF1Q7Z6J0 888 aa21.77■■□□□ 1.08
PVT1-220ENST00000524165 PAGR1Q9BTK6 254 aa21.77■■□□□ 1.08
PVT1-220ENST00000524165 SLC15A5A6NIM6 579 aa21.76■■□□□ 1.07
PVT1-220ENST00000524165 ASNSP08243 561 aa21.76■■□□□ 1.07
PVT1-220ENST00000524165 PHKA1P46020 1223 aa21.76■■□□□ 1.07
PVT1-220ENST00000524165 RFX5P48382 616 aaPredicted RBP21.76■■□□□ 1.07
PVT1-220ENST00000524165 ATP2B2Q01814 1243 aa21.76■■□□□ 1.07
PVT1-220ENST00000524165 DDX10Q13206 875 aaKnown RBP21.76■■□□□ 1.07
PVT1-220ENST00000524165 SPTY2D1Q68D10 685 aaPredicted RBP21.76■■□□□ 1.07
PVT1-220ENST00000524165 POTEEQ6S8J3 1075 aa21.76■■□□□ 1.07
PVT1-220ENST00000524165 ATG9AQ7Z3C6 839 aa21.76■■□□□ 1.07
PVT1-220ENST00000524165 PRKRIP1Q9H875 184 aaPredicted RBP21.76■■□□□ 1.07
PVT1-220ENST00000524165 PIEZO1Q92508 2521 aa21.76■■□□□ 1.07
PVT1-220ENST00000524165 PDS5AQ29RF7 1337 aaKnown RBP21.76■■□□□ 1.07
PVT1-220ENST00000524165 CCNA1P78396 465 aa21.75■■□□□ 1.07
PVT1-220ENST00000524165 GAS2L1Q99501 681 aaPredicted RBP21.75■■□□□ 1.07
PVT1-220ENST00000524165 ABCF2Q9UG63 623 aa21.75■■□□□ 1.07
PVT1-220ENST00000524165 SIPA1L1O43166 1804 aa21.74■■□□□ 1.07
PVT1-220ENST00000524165 USP17L10C9JJH3 530 aa21.74■■□□□ 1.07
PVT1-220ENST00000524165 IGHA2P01877 340 aa21.74■■□□□ 1.07
PVT1-220ENST00000524165 CYBAP13498 195 aa21.74■■□□□ 1.07
PVT1-220ENST00000524165 PTPREP23469 700 aa21.74■■□□□ 1.07
PVT1-220ENST00000524165 TRPV1Q8NER1 839 aa21.74■■□□□ 1.07
PVT1-220ENST00000524165 FBXO3Q9UK99 471 aa21.74■■□□□ 1.07
PVT1-220ENST00000524165 RABGAP1Q9Y3P9 1069 aa21.74■■□□□ 1.07
PVT1-220ENST00000524165 TACC3Q9Y6A5 838 aa21.74■■□□□ 1.07
PVT1-220ENST00000524165 CYP2C19P33261 490 aa21.73■■□□□ 1.07
PVT1-220ENST00000524165 EPHB4P54760 987 aa21.73■■□□□ 1.07
PVT1-220ENST00000524165 IL27Q8NEV9 243 aa21.73■■□□□ 1.07
PVT1-220ENST00000524165 PPM1EQ8WY54 764 aa21.73■■□□□ 1.07
PVT1-220ENST00000524165 TIFAQ96CG3 184 aa21.73■■□□□ 1.07
PVT1-220ENST00000524165 ITGB8P26012 769 aa21.72■■□□□ 1.07
PVT1-220ENST00000524165 GINM1Q9NU53 330 aa21.72■■□□□ 1.07
PVT1-220ENST00000524165 CEP126Q9P2H0 1117 aa21.72■■□□□ 1.07
PVT1-220ENST00000524165 CIAO1O76071 339 aa21.71■■□□□ 1.07
PVT1-220ENST00000524165 MECOMQ03112 1051 aa21.71■■□□□ 1.07
PVT1-220ENST00000524165 RASGRF1Q13972 1273 aa21.71■■□□□ 1.07
PVT1-220ENST00000524165 GRB14Q14449 540 aa21.71■■□□□ 1.07
PVT1-220ENST00000524165 CCDC102BQ68D86 513 aa21.71■■□□□ 1.07
PVT1-220ENST00000524165 NPLOC4Q8TAT6 608 aa21.71■■□□□ 1.07
PVT1-220ENST00000524165 PI4KBQ9UBF8 816 aa21.71■■□□□ 1.07
PVT1-220ENST00000524165 NDUFB9Q9Y6M9 179 aa21.71■■□□□ 1.07
PVT1-220ENST00000524165 PLXNA1Q9UIW2 1896 aa21.71■■□□□ 1.07
PVT1-220ENST00000524165 TCF20Q9UGU0 1960 aaKnown RBP21.7■■□□□ 1.07
PVT1-220ENST00000524165 CNMDO75829 334 aa21.7■■□□□ 1.06
PVT1-220ENST00000524165 ADCYAP1R1P41586 468 aa21.7■■□□□ 1.06
PVT1-220ENST00000524165 TLE2Q04725 743 aa21.7■■□□□ 1.06
PVT1-220ENST00000524165 FPGSQ05932 587 aa21.7■■□□□ 1.06
PVT1-220ENST00000524165 WDR63Q8IWG1 891 aa21.7■■□□□ 1.06
PVT1-220ENST00000524165 HCN4Q9Y3Q4 1203 aa21.7■■□□□ 1.06
PVT1-220ENST00000524165 IVNS1ABPQ9Y6Y0 642 aa21.7■■□□□ 1.06
PVT1-220ENST00000524165 ZNF236Q9UL36 1845 aa21.69■■□□□ 1.06
PVT1-220ENST00000524165 CHD9Q3L8U1 2897 aa21.69■■□□□ 1.06
PVT1-220ENST00000524165 KIAA0355O15063 1070 aa21.69■■□□□ 1.06
PVT1-220ENST00000524165 CLTBP09497 229 aa21.69■■□□□ 1.06
PVT1-220ENST00000524165 WDR78Q5VTH9 848 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms