RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 NT5C2P49902 561 aa29.97■■■□□ 2.39
COL13A1-214ENST00000522165 TGFBRAP1Q8WUH2 860 aa29.97■■■□□ 2.39
COL13A1-214ENST00000522165 RNF26Q9BY78 433 aaPredicted RBP29.97■■■□□ 2.39
COL13A1-214ENST00000522165 RBM28Q9NW13 759 aaKnown RBP29.97■■■□□ 2.39
COL13A1-214ENST00000522165 NMT2O60551 498 aa29.96■■■□□ 2.39
COL13A1-214ENST00000522165 MMP1P03956 469 aa29.96■■■□□ 2.39
COL13A1-214ENST00000522165 SLC4A8Q2Y0W8 1093 aa29.96■■■□□ 2.39
COL13A1-214ENST00000522165 FAM163AQ96GL9 167 aaPredicted RBP29.96■■■□□ 2.39
COL13A1-214ENST00000522165 NAV1Q8NEY1 1877 aa29.96■■■□□ 2.39
COL13A1-214ENST00000522165 FUT2Q10981 343 aa29.95■■■□□ 2.39
COL13A1-214ENST00000522165 MRPS27Q92552 414 aaKnown RBP29.95■■■□□ 2.39
COL13A1-214ENST00000522165 COA1Q9GZY4 146 aa29.95■■■□□ 2.39
COL13A1-214ENST00000522165 MRVI1Q9Y6F6 885 aa29.95■■■□□ 2.39
COL13A1-214ENST00000522165 COL11A2P13942 1736 aaPredicted RBP29.95■■■□□ 2.39
COL13A1-214ENST00000522165 TSPY2A6NKD2 308 aa29.95■■■□□ 2.38
COL13A1-214ENST00000522165 AMOTL1Q8IY63 956 aa29.95■■■□□ 2.38
COL13A1-214ENST00000522165 RRAGDQ9NQL2 400 aaPredicted RBP29.95■■■□□ 2.38
COL13A1-214ENST00000522165 RGPD3A6NKT7 1758 aaPredicted RBP29.95■■■□□ 2.38
COL13A1-214ENST00000522165 RGPD4Q7Z3J3 1758 aa29.95■■■□□ 2.38
COL13A1-214ENST00000522165 SLC39A14Q15043 492 aa29.94■■■□□ 2.38
COL13A1-214ENST00000522165 SLF2Q8IX21 1173 aa29.94■■■□□ 2.38
COL13A1-214ENST00000522165 MPNDQ8N594 471 aa29.94■■■□□ 2.38
COL13A1-214ENST00000522165 MASTLQ96GX5 879 aa29.94■■■□□ 2.38
COL13A1-214ENST00000522165 RIMBP2O15034 1052 aa29.94■■■□□ 2.38
COL13A1-214ENST00000522165 SAFBQ15424 915 aaKnown RBP eCLIP29.94■■■□□ 2.38
COL13A1-214ENST00000522165 MSL1Q68DK7 614 aa29.94■■■□□ 2.38
COL13A1-214ENST00000522165 CTAGE5O15320 804 aa29.93■■■□□ 2.38
COL13A1-214ENST00000522165 OLFM4Q6UX06 510 aa29.93■■■□□ 2.38
COL13A1-214ENST00000522165 DYNLL2Q96FJ2 89 aa29.93■■■□□ 2.38
COL13A1-214ENST00000522165 KCNJ14Q9UNX9 436 aa29.93■■■□□ 2.38
COL13A1-214ENST00000522165 GAKO14976 1311 aa29.93■■■□□ 2.38
COL13A1-214ENST00000522165 CDK5RAP2Q96SN8 1893 aa29.93■■■□□ 2.38
COL13A1-214ENST00000522165 PLCG2P16885 1265 aa29.92■■■□□ 2.38
COL13A1-214ENST00000522165 NOSTRINQ8IVI9 506 aa29.92■■■□□ 2.38
COL13A1-214ENST00000522165 MAPKAPK5Q8IW41 473 aa29.92■■■□□ 2.38
COL13A1-214ENST00000522165 PRPF3O43395 683 aaKnown RBP29.92■■■□□ 2.38
COL13A1-214ENST00000522165 KINO60870 393 aaKnown RBP29.92■■■□□ 2.38
COL13A1-214ENST00000522165 PLEKHA8P1O95397 391 aa29.92■■■□□ 2.38
COL13A1-214ENST00000522165 GTF2IP78347 998 aa29.92■■■□□ 2.38
COL13A1-214ENST00000522165 RCSD1Q6JBY9 416 aa29.92■■■□□ 2.38
COL13A1-214ENST00000522165 DIS3L2Q8IYB7 885 aaKnown RBP29.92■■■□□ 2.38
COL13A1-214ENST00000522165 MAP3K14Q99558 947 aa29.92■■■□□ 2.38
COL13A1-214ENST00000522165 MYH6P13533 1939 aa29.92■■■□□ 2.38
COL13A1-214ENST00000522165 BTBD18B2RXH4 712 aa29.91■■■□□ 2.38
COL13A1-214ENST00000522165 AKAP17AQ02040 695 aaKnown RBP29.91■■■□□ 2.38
COL13A1-214ENST00000522165 AXDND1Q5T1B0 1012 aaPredicted RBP29.91■■■□□ 2.38
COL13A1-214ENST00000522165 FMR1NBQ8N0W7 255 aaPredicted RBP29.91■■■□□ 2.38
COL13A1-214ENST00000522165 ZC3H12CQ9C0D7 883 aaKnown RBP29.91■■■□□ 2.38
COL13A1-214ENST00000522165 FOXP1Q9H334 677 aaPredicted RBP29.91■■■□□ 2.38
COL13A1-214ENST00000522165 TFAP4Q01664 338 aa29.91■■■□□ 2.38
COL13A1-214ENST00000522165 PTPAQ15257 358 aa29.91■■■□□ 2.38
COL13A1-214ENST00000522165 PKN1Q16512 942 aa29.91■■■□□ 2.38
COL13A1-214ENST00000522165 HS1BP3Q53T59 392 aa29.91■■■□□ 2.38
COL13A1-214ENST00000522165 TMTC3Q6ZXV5 915 aa29.91■■■□□ 2.38
COL13A1-214ENST00000522165 TEX11Q8IYF3 940 aa29.91■■■□□ 2.38
COL13A1-214ENST00000522165 FAM200AQ8TCP9 573 aa29.91■■■□□ 2.38
COL13A1-214ENST00000522165 ESPNB1AK53 854 aa29.9■■■□□ 2.38
COL13A1-214ENST00000522165 RHBDL3P58872 404 aa29.9■■■□□ 2.38
COL13A1-214ENST00000522165 SASS6Q6UVJ0 657 aa29.9■■■□□ 2.38
COL13A1-214ENST00000522165 DPP8Q6V1X1 898 aaPredicted RBP29.9■■■□□ 2.38
COL13A1-214ENST00000522165 A0A1B0GVL5 298 aa29.89■■■□□ 2.38
COL13A1-214ENST00000522165 PLCD1P51178 756 aa29.89■■■□□ 2.38
COL13A1-214ENST00000522165 MKNK2Q9HBH9 465 aa29.89■■■□□ 2.38
COL13A1-214ENST00000522165 USP25Q9UHP3 1055 aa29.89■■■□□ 2.38
COL13A1-214ENST00000522165 SAP30BPQ9UHR5 308 aaKnown RBP29.89■■■□□ 2.38
COL13A1-214ENST00000522165 PPP6R2O75170 966 aa29.89■■■□□ 2.37
COL13A1-214ENST00000522165 CTCFLQ8NI51 663 aaPredicted RBP29.89■■■□□ 2.37
COL13A1-214ENST00000522165 NDUFA8P51970 172 aa29.88■■■□□ 2.37
COL13A1-214ENST00000522165 DGKHQ86XP1 1220 aa29.88■■■□□ 2.37
COL13A1-214ENST00000522165 ANKS1AQ92625 1134 aa29.88■■■□□ 2.37
COL13A1-214ENST00000522165 IL17RBQ9NRM6 502 aa29.88■■■□□ 2.37
COL13A1-214ENST00000522165 SUGT1Q9Y2Z0 365 aa29.88■■■□□ 2.37
COL13A1-214ENST00000522165 DDX60LQ5H9U9 1706 aaKnown RBP29.88■■■□□ 2.37
COL13A1-214ENST00000522165 ANO6Q4KMQ2 910 aa29.87■■■□□ 2.37
COL13A1-214ENST00000522165 V9GY48 417 aaPredicted RBP29.87■■■□□ 2.37
COL13A1-214ENST00000522165 WDHD1O75717 1129 aaPredicted RBP29.87■■■□□ 2.37
COL13A1-214ENST00000522165 CMA1P23946 247 aa29.87■■■□□ 2.37
COL13A1-214ENST00000522165 MARCKSP29966 332 aaPredicted RBP29.87■■■□□ 2.37
COL13A1-214ENST00000522165 JMYQ8N9B5 988 aa29.87■■■□□ 2.37
COL13A1-214ENST00000522165 SHISA4Q96DD7 197 aa29.87■■■□□ 2.37
COL13A1-214ENST00000522165 FLT1P17948 1338 aa29.87■■■□□ 2.37
COL13A1-214ENST00000522165 XBP1P17861 261 aa29.86■■■□□ 2.37
COL13A1-214ENST00000522165 CCDC178Q5BJE1 867 aa29.86■■■□□ 2.37
COL13A1-214ENST00000522165 TMX4Q9H1E5 349 aaPredicted RBP29.86■■■□□ 2.37
COL13A1-214ENST00000522165 TCP11L1Q9NUJ3 509 aa29.86■■■□□ 2.37
COL13A1-214ENST00000522165 SRBD1Q8N5C6 995 aaKnown RBP29.86■■■□□ 2.37
COL13A1-214ENST00000522165 SLC44A5Q8NCS7 719 aa29.86■■■□□ 2.37
COL13A1-214ENST00000522165 ZNF622Q969S3 477 aaKnown RBP eCLIP29.86■■■□□ 2.37
COL13A1-214ENST00000522165 DAGLAQ9Y4D2 1042 aa29.86■■■□□ 2.37
COL13A1-214ENST00000522165 CNTNAP5Q8WYK1 1306 aa29.85■■■□□ 2.37
COL13A1-214ENST00000522165 ZNF444Q8N0Y2 327 aaPredicted RBP29.85■■■□□ 2.37
COL13A1-214ENST00000522165 KAT14Q9H8E8 782 aa29.85■■■□□ 2.37
COL13A1-214ENST00000522165 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.85■■■□□ 2.37
COL13A1-214ENST00000522165 RGS17Q9UGC6 210 aaPredicted RBP29.85■■■□□ 2.37
COL13A1-214ENST00000522165 TOB1P50616 345 aaPredicted RBP29.84■■■□□ 2.37
COL13A1-214ENST00000522165 C2CD5Q86YS7 1000 aa29.84■■■□□ 2.37
COL13A1-214ENST00000522165 CERS5Q8N5B7 392 aa29.84■■■□□ 2.37
COL13A1-214ENST00000522165 hCG_1642624A0A1W2PR95 340 aa29.84■■■□□ 2.37
COL13A1-214ENST00000522165 TSPY3P0CV98 308 aa29.84■■■□□ 2.37
COL13A1-214ENST00000522165 TSPY8P0CW00 308 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms