RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 HLA-DOAP06340 250 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 ASIC1P78348 528 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 C6orf50Q9HD87 102 aa12.78□□□□□ -0.36
PCDHGB4-201ENST00000519479 CCDC175P0C221 793 aa12.77□□□□□ -0.36
PCDHGB4-201ENST00000519479 PLCG2P16885 1265 aa12.77□□□□□ -0.36
PCDHGB4-201ENST00000519479 TRIM21P19474 475 aaKnown RBP12.77□□□□□ -0.36
PCDHGB4-201ENST00000519479 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.36
PCDHGB4-201ENST00000519479 DPCR1Q3MIW9 517 aa12.77□□□□□ -0.36
PCDHGB4-201ENST00000519479 TRMT44Q8IYL2 757 aaKnown RBP12.77□□□□□ -0.36
PCDHGB4-201ENST00000519479 LCORLQ8N3X6 602 aa12.77□□□□□ -0.36
PCDHGB4-201ENST00000519479 ZSCAN10Q96SZ4 725 aaPredicted RBP12.77□□□□□ -0.36
PCDHGB4-201ENST00000519479 EIF3JO75822 258 aaKnown RBP12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 FGFR1OPO95684 399 aaKnown RBP12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 TRIM28Q13263 835 aaKnown RBP12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 KARSQ15046 597 aaKnown RBP12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 TXLNBQ8N3L3 684 aa12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 BBXQ8WY36 941 aaPredicted RBP12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 PXDNQ92626 1479 aa12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 NWD1Q149M9 1564 aa12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 ERICH4A6NGS2 130 aa12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 ADRA2BP18089 450 aa12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 KCNQ4P56696 695 aa12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 LRRC8AQ8IWT6 810 aa12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 TEX11Q8IYF3 940 aa12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 STAMQ92783 540 aa12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 RRP36Q96EU6 259 aaKnown RBP12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 STRBPQ96SI9 672 aaKnown RBP12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 CHD2O14647 1828 aaKnown RBP12.77□□□□□ -0.37
PCDHGB4-201ENST00000519479 UFL1O94874 794 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 JAKMIP3Q5VZ66 844 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 WDR66Q8TBY9 1149 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 KIAA1524Q8TCG1 905 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 TFAP4Q01664 338 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 FAM114A1Q8IWE2 563 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 LZTFL1Q9NQ48 299 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 CCT6AP40227 531 aaKnown RBP12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 UBE4AQ14139 1066 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 CLEC4GQ6UXB4 293 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 KRBA2Q6ZNG9 492 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
PCDHGB4-201ENST00000519479 RPS6KA4O75676 772 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 GNA11P29992 359 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 ENOX2Q16206 610 aaKnown RBP12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 ZNF827Q17R98 1081 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 LETM2Q2VYF4 491 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 CACTINQ8WUQ7 758 aaKnown RBP12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 FERMT2Q96AC1 680 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 UBA5Q9GZZ9 404 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 PCDHA5Q9Y5H7 936 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 BMS1Q14692 1282 aaKnown RBP12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 TDRD12Q587J7 1177 aaKnown RBP12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 AXDND1Q5T1B0 1012 aaPredicted RBP12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 IQCEQ6IPM2 695 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 CTNND2Q9UQB3 1225 aa12.75□□□□□ -0.37
PCDHGB4-201ENST00000519479 AKR1B15C9JRZ8 316 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 PARP1P09874 1014 aaKnown RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 PDE6BP35913 854 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 MB21D2Q8IYB1 491 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 IGSF22Q8N9C0 903 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 INCENPQ9NQS7 918 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 POLR3GO15318 223 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 EXOSC10Q01780 885 aaKnown RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 UBXN1Q04323 297 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 CCDC40Q4G0X9 1142 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 WWC2Q6AWC2 1192 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 SRRTQ9BXP5 876 aaKnown RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 ALDH1B1P30837 517 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 MAPKAPK5Q8IW41 473 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 GBP3Q9H0R5 595 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 FANCLQ9NW38 375 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 H0YIN7 160 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 USO1O60763 962 aaKnown RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 PPP6R2O75170 966 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 IFNAR1P17181 557 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 LIFRP42702 1097 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 TNNI2P48788 182 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 DYNLL1P63167 89 aaKnown RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 FBXO41Q8TF61 875 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 TGFBRAP1Q8WUH2 860 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 VPS16Q9H269 839 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 RIPOR2Q9Y4F9 1068 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 SYNRGQ9UMZ2 1314 aa12.74□□□□□ -0.37
PCDHGB4-201ENST00000519479 ARPP21Q9UBL0 812 aaPredicted RBP12.73□□□□□ -0.37
PCDHGB4-201ENST00000519479 NR5A1Q13285 461 aa12.73□□□□□ -0.37
PCDHGB4-201ENST00000519479 CYB5R4Q7L1T6 521 aa12.73□□□□□ -0.37
PCDHGB4-201ENST00000519479 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
PCDHGB4-201ENST00000519479 ERO1AQ96HE7 468 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1463.9 ms