RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 KRT26Q7Z3Y9 468 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 TBC1D10CQ8IV04 446 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 KIF2CQ99661 725 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 MTA3Q9BTC8 594 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 KRT23Q9C075 422 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 METRNQ9UJH8 293 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 TAF6LQ9Y6J9 622 aa13.55□□□□□ -0.24
ARFGEF1-202ENST00000517955 CDK8P49336 464 aa13.54□□□□□ -0.24
ARFGEF1-202ENST00000517955 CTDSPL2Q05D32 466 aa13.54□□□□□ -0.24
ARFGEF1-202ENST00000517955 STOX1Q6ZVD7 989 aa13.54□□□□□ -0.24
ARFGEF1-202ENST00000517955 FBXL16Q8N461 479 aa13.54□□□□□ -0.24
ARFGEF1-202ENST00000517955 GPBP1L1Q9HC44 474 aaPredicted RBP13.54□□□□□ -0.24
ARFGEF1-202ENST00000517955 ZSWIM6Q9HCJ5 1215 aa13.54□□□□□ -0.24
ARFGEF1-202ENST00000517955 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
ARFGEF1-202ENST00000517955 WDR19Q8NEZ3 1342 aa13.54□□□□□ -0.24
ARFGEF1-202ENST00000517955 SMIM22K7EJ46 135 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 YY1P25490 414 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 SHMT1P34896 483 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 TRDNQ13061 729 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 NBPF12Q5TAG4 269 aaPredicted RBP13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 DCAF15Q66K64 600 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 NCOA7Q8NI08 942 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 DYNLL2Q96FJ2 89 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 CCDC17Q96LX7 622 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 NEK1Q96PY6 1258 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 DNAJC18Q9H819 358 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 GINM1Q9NU53 330 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 ZNF112Q9UJU3 913 aa13.53□□□□□ -0.24
ARFGEF1-202ENST00000517955 KIF3CO14782 793 aa13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 ADCK5Q3MIX3 580 aa13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 USP48Q86UV5 1035 aa13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 MB21D2Q8IYB1 491 aaPredicted RBP13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 CRACR2BQ8N4Y2 399 aaPredicted RBP13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 ESR2Q92731 530 aa13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 ALDH8A1Q9H2A2 487 aaPredicted RBP13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 MKNK2Q9HBH9 465 aa13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 TCP11L1Q9NUJ3 509 aa13.52□□□□□ -0.25
ARFGEF1-202ENST00000517955 PLIN4Q96Q06 1357 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 NEDD4P46934 1319 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 UNCXA6NJT0 531 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 PHF20L1A8MW92 1017 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 ADM5C9JUS6 153 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 RASA1P20936 1047 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 EXOSC10Q01780 885 aaKnown RBP13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 RABEP1Q15276 862 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 DHX32Q7L7V1 743 aaKnown RBP13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 ZSWIM5Q9P217 1185 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 MYH8P13535 1937 aa13.51□□□□□ -0.25
ARFGEF1-202ENST00000517955 SSC5DA1L4H1 1573 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 ITGBL1O95965 494 aaPredicted RBP13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 MCM5P33992 734 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 NOVP48745 357 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 CCDC178Q5BJE1 867 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 MAP1SQ66K74 1059 aaPredicted RBP13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 BLOC1S2Q6QNY1 142 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 RUFY3Q7L099 469 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 NEDD1Q8NHV4 660 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 CDCA5Q96FF9 252 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 JAKMIP1Q96N16 626 aaKnown RBP13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 ZNF341Q9BYN7 854 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 AGXT2Q9BYV1 514 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 GLIS2Q9BZE0 524 aaPredicted RBP13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 INCENPQ9NQS7 918 aa13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 SCAF8Q9UPN6 1271 aaKnown RBP13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 GREB1LQ9C091 1923 aaPredicted RBP13.5□□□□□ -0.25
ARFGEF1-202ENST00000517955 B4E1Z4 1266 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 PPP1R12BO60237 982 aaPredicted RBP13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 CTNND1O60716 968 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 CASTP20810 708 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 RPS6KB1P23443 525 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 NF2P35240 595 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 FKBP1BP68106 108 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 SLC4A8Q2Y0W8 1093 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 PPP4R3BQ5MIZ7 849 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 IER5LQ5T953 404 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 RBM46Q8TBY0 533 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 ANKS1AQ92625 1134 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 KLRG1Q96E93 195 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 TMEM87BQ96K49 555 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 CYP46A1Q9Y6A2 500 aa13.49□□□□□ -0.25
ARFGEF1-202ENST00000517955 IGKV6D-41A0A0C4DH26 115 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 RANBP6O60518 1105 aaKnown RBP13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 KDM4AO75164 1064 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 USP2O75604 605 aaPredicted RBP13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 PRDM1O75626 825 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 TOMM70O94826 608 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 CAP2P40123 477 aa13.48□□□□□ -0.25
ARFGEF1-202ENST00000517955 ANTXR2P58335 489 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms