RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 DAAM1Q9Y4D1 1078 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 SLC30A1Q9Y6M5 507 aa12.15□□□□□ -0.46
PDLIM5-210ENST00000508216 KDM1AO60341 852 aa12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 ALOX15P16050 662 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 TCF7P36402 384 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 TMEM62Q0P6H9 643 aa12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 RCN1Q15293 331 aa12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 BCAS4Q8TDM0 211 aa12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 WHAMMQ8TF30 809 aa12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 NSMCE1Q8WV22 266 aa12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 MAIP1Q8WWC4 291 aa12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 GALNT8Q9NY28 637 aa12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 ZNF148Q9UQR1 794 aa12.14□□□□□ -0.47
PDLIM5-210ENST00000508216 BIRC5O15392 142 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 ABL2P42684 1182 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 ARPC4P59998 168 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 PPP2R3AQ06190 1150 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 CBX3Q13185 183 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 WHAMMP3Q1A5X7 153 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 THOC7Q6I9Y2 204 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 GIMAP6Q6P9H5 292 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 TTC30AQ86WT1 665 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 SLC15A3Q8IY34 581 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 CEP57L1Q8IYX8 460 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 CCDC155Q8N6L0 562 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 DDX12PQ92771 950 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 GCC1Q96CN9 775 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 TRAPPC9Q96Q05 1148 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 MPHOSPH9Q99550 1183 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 SH3GL2Q99962 352 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 SEZ6LQ9BYH1 1024 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 DMAP1Q9NPF5 467 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 COL17A1Q9UMD9 1497 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 GOLGA6L4A6NEF3 574 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 TTI1O43156 1089 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 SMARCA5O60264 1052 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 SMIM24O75264 130 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 RPSAP08865 295 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 CCT6AP40227 531 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 ZNF132P52740 706 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 NLRP5P59047 1200 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 SULT2A1Q06520 285 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 DSG2Q14126 1118 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 FXNQ16595 210 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 NBPF14Q5TI25 921 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 CHD1LQ86WJ1 897 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 MYO1HQ8N1T3 1032 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 TBC1D31Q96DN5 1066 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 SMC6Q96SB8 1091 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 TANGO6Q9C0B7 1094 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 MRPL46Q9H2W6 279 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 SPO11Q9Y5K1 396 aa12.13□□□□□ -0.47
PDLIM5-210ENST00000508216 STXBP3O00186 592 aa12.12□□□□□ -0.47
PDLIM5-210ENST00000508216 SYF2O95926 243 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-210ENST00000508216 PPP1R15BQ5SWA1 713 aa12.12□□□□□ -0.47
PDLIM5-210ENST00000508216 GALNT17Q6IS24 598 aa12.12□□□□□ -0.47
PDLIM5-210ENST00000508216 WDR93Q6P2C0 686 aa12.12□□□□□ -0.47
PDLIM5-210ENST00000508216 TRIML1Q8N9V2 468 aa12.12□□□□□ -0.47
PDLIM5-210ENST00000508216 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
PDLIM5-210ENST00000508216 UBE2OQ9C0C9 1292 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-210ENST00000508216 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 CCDC162PA2VCL2 907 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 RPL17P18621 184 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 MRPS35P82673 323 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 SH2D4BQ5SQS7 431 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 C6orf89Q6UWU4 347 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 NSUN7Q8NE18 718 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 TRPC4APQ8TEL6 797 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 PLEKHA4Q9H4M7 779 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 SLC5A4Q9NY91 659 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 DKK3Q9UBP4 350 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 FBXO9Q9UK97 447 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 DDX19BQ9UMR2 479 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 LMTK2Q8IWU2 1503 aa12.11□□□□□ -0.47
PDLIM5-210ENST00000508216 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 PPP1R12BO60237 982 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 DNAJC8O75937 253 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 PDHBP11177 359 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 MYCLP1P12525 358 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 CTCFP49711 727 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 INAQ16352 499 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 GNPTABQ3T906 1256 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 LACTB2Q53H82 288 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 SMARCC2Q8TAQ2 1214 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 ZNF653Q96CK0 615 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 OTUD5Q96G74 571 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 CGREF1Q99674 301 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 CAPS2Q9BXY5 557 aa12.1□□□□□ -0.47
PDLIM5-210ENST00000508216 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms