RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
LINC00958-201ENST00000504230 MKRN1Q9UHC7 482 aaKnown RBP13□□□□□ -0.33
LINC00958-201ENST00000504230 PPP2R3BQ9Y5P8 575 aa13□□□□□ -0.33
LINC00958-201ENST00000504230 RBM8AQ9Y5S9 174 aaKnown RBP13□□□□□ -0.33
LINC00958-201ENST00000504230 USP17L12C9JPN9 530 aa12.99□□□□□ -0.33
LINC00958-201ENST00000504230 USP17L21D6R901 530 aa12.99□□□□□ -0.33
LINC00958-201ENST00000504230 HLA-DOAP06340 250 aa12.99□□□□□ -0.33
LINC00958-201ENST00000504230 YY1P25490 414 aa12.99□□□□□ -0.33
LINC00958-201ENST00000504230 MFSD10Q14728 455 aa12.99□□□□□ -0.33
LINC00958-201ENST00000504230 IMMTQ16891 758 aaKnown RBP12.99□□□□□ -0.33
LINC00958-201ENST00000504230 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
LINC00958-201ENST00000504230 DEFB129Q9H1M3 183 aa12.99□□□□□ -0.33
LINC00958-201ENST00000504230 PGAP2Q9UHJ9 254 aa12.99□□□□□ -0.33
LINC00958-201ENST00000504230 COL2A1P02458 1487 aaPredicted RBP12.99□□□□□ -0.33
LINC00958-201ENST00000504230 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
LINC00958-201ENST00000504230 MINDY4BA8MYZ0 360 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 ZNF213O14771 459 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 RASA3Q14644 834 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 RNF20Q5VTR2 975 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 USP26Q9BXU7 913 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 SAP30BPQ9UHR5 308 aaKnown RBP12.98□□□□□ -0.33
LINC00958-201ENST00000504230 CNTNAP1P78357 1384 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 SLC3A2P08195 630 aaKnown RBP12.98□□□□□ -0.33
LINC00958-201ENST00000504230 CDC37L1Q7L3B6 337 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 KRT26Q7Z3Y9 468 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 PI4KBQ9UBF8 816 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 PALD1Q9ULE6 856 aa12.98□□□□□ -0.33
LINC00958-201ENST00000504230 NAV1Q8NEY1 1877 aa12.97□□□□□ -0.33
LINC00958-201ENST00000504230 CDK5RAP2Q96SN8 1893 aa12.97□□□□□ -0.33
LINC00958-201ENST00000504230 ATRNL1Q5VV63 1379 aa12.97□□□□□ -0.33
LINC00958-201ENST00000504230 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
LINC00958-201ENST00000504230 PPARAQ07869 468 aa12.97□□□□□ -0.33
LINC00958-201ENST00000504230 NECTIN1Q15223 517 aa12.97□□□□□ -0.33
LINC00958-201ENST00000504230 C12orf60Q5U649 245 aa12.97□□□□□ -0.33
LINC00958-201ENST00000504230 CSRNP1Q96S65 589 aa12.97□□□□□ -0.33
LINC00958-201ENST00000504230 TRIM34Q9BYJ4 488 aa12.97□□□□□ -0.33
LINC00958-201ENST00000504230 TMEM39BQ9GZU3 492 aa12.97□□□□□ -0.33
LINC00958-201ENST00000504230 DDTLA6NHG4 134 aaPredicted RBP12.96□□□□□ -0.33
LINC00958-201ENST00000504230 HSPA4P34932 840 aa12.96□□□□□ -0.33
LINC00958-201ENST00000504230 HAND2P61296 217 aa12.96□□□□□ -0.33
LINC00958-201ENST00000504230 SLC4A8Q2Y0W8 1093 aa12.96□□□□□ -0.33
LINC00958-201ENST00000504230 CREB3L3Q68CJ9 461 aa12.96□□□□□ -0.33
LINC00958-201ENST00000504230 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.33
LINC00958-201ENST00000504230 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.33
LINC00958-201ENST00000504230 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
LINC00958-201ENST00000504230 SCAF8Q9UPN6 1271 aaKnown RBP12.96□□□□□ -0.33
LINC00958-201ENST00000504230 MYH1P12882 1939 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 BAZ2AQ9UIF9 1905 aaKnown RBP12.95□□□□□ -0.34
LINC00958-201ENST00000504230 CYP2D7A0A087X1C5 515 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 CYP21A2P08686 494 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 CYP2D6P10635 497 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 PLCD1P51178 756 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 SUPT20HL1Q3ZLR7 823 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 MAP1SQ66K74 1059 aaPredicted RBP12.95□□□□□ -0.34
LINC00958-201ENST00000504230 SH3BP5LQ7L8J4 393 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 USP48Q86UV5 1035 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 CRACR2BQ8N4Y2 399 aaPredicted RBP12.95□□□□□ -0.34
LINC00958-201ENST00000504230 EHD4Q9H223 541 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 RNF41Q9H4P4 317 aaPredicted RBP12.95□□□□□ -0.34
LINC00958-201ENST00000504230 SERPINB13Q9UIV8 391 aa12.95□□□□□ -0.34
LINC00958-201ENST00000504230 DDX60LQ5H9U9 1706 aaKnown RBP12.95□□□□□ -0.34
LINC00958-201ENST00000504230 ADM5C9JUS6 153 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 SLC27A2O14975 620 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 NF2P35240 595 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 PDE4BQ07343 736 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 ADGRD1Q6QNK2 874 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 TEPSINQ96N21 525 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 C22orf23Q9BZE7 217 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 HERC5Q9UII4 1024 aaKnown RBP12.94□□□□□ -0.34
LINC00958-201ENST00000504230 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 TK2O00142 265 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
LINC00958-201ENST00000504230 PSEN2P49810 448 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 TRDNQ13061 729 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 KRT32Q14532 448 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 AKNAD1Q5T1N1 836 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 NBPF12Q5TAG4 269 aaPredicted RBP12.94□□□□□ -0.34
LINC00958-201ENST00000504230 DCAF15Q66K64 600 aa12.94□□□□□ -0.34
LINC00958-201ENST00000504230 GLIS2Q9BZE0 524 aaPredicted RBP12.94□□□□□ -0.34
LINC00958-201ENST00000504230 NT5C2P49902 561 aa12.93□□□□□ -0.34
LINC00958-201ENST00000504230 ANAPC15P60006 121 aa12.93□□□□□ -0.34
LINC00958-201ENST00000504230 MFSD6Q6ZSS7 791 aa12.93□□□□□ -0.34
LINC00958-201ENST00000504230 C16orf86Q6ZW13 317 aa12.93□□□□□ -0.34
LINC00958-201ENST00000504230 STAG1Q8WVM7 1258 aa12.93□□□□□ -0.34
LINC00958-201ENST00000504230 KCNB2Q92953 911 aa12.93□□□□□ -0.34
LINC00958-201ENST00000504230 CDCA5Q96FF9 252 aa12.93□□□□□ -0.34
LINC00958-201ENST00000504230 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC00958-201ENST00000504230 MKNK2Q9HBH9 465 aa12.93□□□□□ -0.34
LINC00958-201ENST00000504230 LAMB1P07942 1786 aa12.93□□□□□ -0.34
LINC00958-201ENST00000504230 GABPAQ06546 454 aa12.92□□□□□ -0.34
LINC00958-201ENST00000504230 TSGA10IPQ3SY00 556 aa12.92□□□□□ -0.34
LINC00958-201ENST00000504230 PRAMEF18Q5VWM3 479 aa12.92□□□□□ -0.34
LINC00958-201ENST00000504230 DMRTA1Q5VZB9 504 aa12.92□□□□□ -0.34
LINC00958-201ENST00000504230 METTL16Q86W50 562 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms