RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 SHROOM1Q2M3G4 852 aaPredicted RBP26.25■■□□□ 1.79
RNF4-205ENST00000504224 EAF2Q96CJ1 260 aaPredicted RBP26.25■■□□□ 1.79
RNF4-205ENST00000504224 MIGA1Q8NAN2 632 aa26.24■■□□□ 1.79
RNF4-205ENST00000504224 NR2E3Q9Y5X4 410 aa26.24■■□□□ 1.79
RNF4-205ENST00000504224 ZBTB21Q9ULJ3 1066 aa26.23■■□□□ 1.79
RNF4-205ENST00000504224 C19orf81C9J6K1 198 aa26.22■■□□□ 1.79
RNF4-205ENST00000504224 USP17L10C9JJH3 530 aa26.22■■□□□ 1.79
RNF4-205ENST00000504224 IGSF3O75054 1194 aa26.22■■□□□ 1.79
RNF4-205ENST00000504224 USP5P45974 858 aa26.22■■□□□ 1.79
RNF4-205ENST00000504224 METTL16Q86W50 562 aaKnown RBP26.22■■□□□ 1.79
RNF4-205ENST00000504224 MAGEB6Q8N7X4 407 aa26.22■■□□□ 1.79
RNF4-205ENST00000504224 P2RX7Q99572 595 aaKnown RBP26.22■■□□□ 1.79
RNF4-205ENST00000504224 PAK6Q9NQU5 681 aaPredicted RBP26.22■■□□□ 1.79
RNF4-205ENST00000504224 NDUFB9Q9Y6M9 179 aa26.22■■□□□ 1.79
RNF4-205ENST00000504224 SIPA1L1O43166 1804 aa26.22■■□□□ 1.79
RNF4-205ENST00000504224 CEP85Q6P2H3 762 aa26.21■■□□□ 1.79
RNF4-205ENST00000504224 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.21■■□□□ 1.79
RNF4-205ENST00000504224 GINM1Q9NU53 330 aa26.21■■□□□ 1.79
RNF4-205ENST00000504224 MORF4L1Q9UBU8 362 aa26.21■■□□□ 1.79
RNF4-205ENST00000504224 EXOC6BQ9Y2D4 811 aa26.21■■□□□ 1.79
RNF4-205ENST00000504224 HMGCRP04035 888 aa26.2■■□□□ 1.78
RNF4-205ENST00000504224 HOXA7P31268 230 aaPredicted RBP26.2■■□□□ 1.78
RNF4-205ENST00000504224 AACSQ86V21 672 aa26.2■■□□□ 1.78
RNF4-205ENST00000504224 GJD2Q9UKL4 321 aa26.2■■□□□ 1.78
RNF4-205ENST00000504224 PEX10O60683 326 aa26.19■■□□□ 1.78
RNF4-205ENST00000504224 CAPN2P17655 700 aa26.19■■□□□ 1.78
RNF4-205ENST00000504224 HERVK_113P62684 666 aa26.19■■□□□ 1.78
RNF4-205ENST00000504224 MAP3K12Q12852 859 aa26.19■■□□□ 1.78
RNF4-205ENST00000504224 ERC1Q8IUD2 1116 aa26.19■■□□□ 1.78
RNF4-205ENST00000504224 PANK1Q8TE04 598 aa26.19■■□□□ 1.78
RNF4-205ENST00000504224 ANTXR1Q9H6X2 564 aa26.19■■□□□ 1.78
RNF4-205ENST00000504224 RBM27Q9P2N5 1060 aaKnown RBP26.19■■□□□ 1.78
RNF4-205ENST00000504224 EVI5O60447 810 aa26.18■■□□□ 1.78
RNF4-205ENST00000504224 GH2P01242 217 aa26.18■■□□□ 1.78
RNF4-205ENST00000504224 CERS3Q8IU89 383 aa26.18■■□□□ 1.78
RNF4-205ENST00000504224 GPRC5AQ8NFJ5 357 aa26.18■■□□□ 1.78
RNF4-205ENST00000504224 MYO5AQ9Y4I1 1855 aaKnown RBP26.18■■□□□ 1.78
RNF4-205ENST00000504224 CYP2B6P20813 491 aa26.17■■□□□ 1.78
RNF4-205ENST00000504224 TRIM32Q13049 653 aa26.17■■□□□ 1.78
RNF4-205ENST00000504224 CCAR1Q8IX12 1150 aaKnown RBP26.17■■□□□ 1.78
RNF4-205ENST00000504224 PAWRQ96IZ0 340 aaKnown RBP26.17■■□□□ 1.78
RNF4-205ENST00000504224 FEZ1Q99689 392 aa26.17■■□□□ 1.78
RNF4-205ENST00000504224 CRISPLD2Q9H0B8 497 aa26.17■■□□□ 1.78
RNF4-205ENST00000504224 TXNRD2Q9NNW7 524 aa26.17■■□□□ 1.78
RNF4-205ENST00000504224 HMX1Q9NP08 348 aaPredicted RBP26.17■■□□□ 1.78
RNF4-205ENST00000504224 CEP290O15078 2479 aa26.17■■□□□ 1.78
RNF4-205ENST00000504224 DOCK3Q8IZD9 2030 aa26.17■■□□□ 1.78
RNF4-205ENST00000504224 CDK5RAP2Q96SN8 1893 aa26.17■■□□□ 1.78
RNF4-205ENST00000504224 ZYXQ15942 572 aaKnown RBP26.16■■□□□ 1.78
RNF4-205ENST00000504224 USP17L2Q6R6M4 530 aa26.16■■□□□ 1.78
RNF4-205ENST00000504224 PAGR1Q9BTK6 254 aa26.16■■□□□ 1.78
RNF4-205ENST00000504224 IL1RAPL2Q9NP60 686 aa26.16■■□□□ 1.78
RNF4-205ENST00000504224 NECAB2Q7Z6G3 386 aa26.15■■□□□ 1.78
RNF4-205ENST00000504224 NUDT12Q9BQG2 462 aa26.15■■□□□ 1.78
RNF4-205ENST00000504224 BCL11AQ9H165 835 aa26.15■■□□□ 1.78
RNF4-205ENST00000504224 EMILIN3Q9NT22 766 aa26.15■■□□□ 1.78
RNF4-205ENST00000504224 SERPINB13Q9UIV8 391 aa26.15■■□□□ 1.78
RNF4-205ENST00000504224 FOCADQ5VW36 1801 aa26.15■■□□□ 1.78
RNF4-205ENST00000504224 RPTORQ8N122 1335 aa26.14■■□□□ 1.78
RNF4-205ENST00000504224 PDE3AQ14432 1141 aa26.14■■□□□ 1.78
RNF4-205ENST00000504224 RAB3GAP1Q15042 981 aa26.14■■□□□ 1.78
RNF4-205ENST00000504224 TTC6Q86TZ1 520 aa26.14■■□□□ 1.78
RNF4-205ENST00000504224 DIS3LQ8TF46 1054 aaKnown RBP26.14■■□□□ 1.78
RNF4-205ENST00000504224 CWC22Q9HCG8 908 aaKnown RBP26.14■■□□□ 1.78
RNF4-205ENST00000504224 RBPJLQ9UBG7 517 aa26.14■■□□□ 1.78
RNF4-205ENST00000504224 APBB1O00213 710 aa26.13■■□□□ 1.77
RNF4-205ENST00000504224 MAPK4P31152 587 aa26.13■■□□□ 1.77
RNF4-205ENST00000504224 HSP90AB4PQ58FF6 505 aa26.13■■□□□ 1.77
RNF4-205ENST00000504224 GTF3C2Q8WUA4 911 aaPredicted RBP26.13■■□□□ 1.77
RNF4-205ENST00000504224 SOCS4Q8WXH5 440 aa26.13■■□□□ 1.77
RNF4-205ENST00000504224 TRIB2Q92519 343 aa26.13■■□□□ 1.77
RNF4-205ENST00000504224 ERVK-9P63128 1117 aa26.12■■□□□ 1.77
RNF4-205ENST00000504224 ERVK-24P63145 666 aa26.12■■□□□ 1.77
RNF4-205ENST00000504224 CERKLQ49MI3 558 aaPredicted RBP26.12■■□□□ 1.77
RNF4-205ENST00000504224 TATDN1Q6P1N9 297 aa26.12■■□□□ 1.77
RNF4-205ENST00000504224 EHD4Q9H223 541 aa26.12■■□□□ 1.77
RNF4-205ENST00000504224 ABCB5Q2M3G0 1257 aa26.11■■□□□ 1.77
RNF4-205ENST00000504224 Q3C1V9 767 aa26.11■■□□□ 1.77
RNF4-205ENST00000504224 RHPN1Q8TCX5 695 aa26.11■■□□□ 1.77
RNF4-205ENST00000504224 PORCNQ9H237 461 aa26.11■■□□□ 1.77
RNF4-205ENST00000504224 TRIOBPQ9H2D6 2365 aa26.11■■□□□ 1.77
RNF4-205ENST00000504224 MAGEB6P1A0A0J9YX57 407 aa26.1■■□□□ 1.77
RNF4-205ENST00000504224 POLR3DP05423 398 aaPredicted RBP26.1■■□□□ 1.77
RNF4-205ENST00000504224 TTF1Q15361 905 aaPredicted RBP26.1■■□□□ 1.77
RNF4-205ENST00000504224 TMED8Q6PL24 325 aaPredicted RBP26.1■■□□□ 1.77
RNF4-205ENST00000504224 ANKLE1Q8NAG6 615 aa26.1■■□□□ 1.77
RNF4-205ENST00000504224 CABP5Q9NP86 173 aa26.1■■□□□ 1.77
RNF4-205ENST00000504224 USP17L15C9J2P7 530 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 USP17L13C9JLJ4 530 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 USP17L11C9JVI0 530 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 USP17L18D6R9N7 530 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 USP17L22D6RA61 530 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 USP17L17D6RBQ6 530 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 USP17L19D6RCP7 530 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 USP17L20D6RJB6 530 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 PRKAR2AP13861 404 aaKnown RBP26.09■■□□□ 1.77
RNF4-205ENST00000504224 ZKSCAN1P17029 563 aaPredicted RBP26.09■■□□□ 1.77
RNF4-205ENST00000504224 USP14P54578 494 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 USP17L24Q0WX57 530 aa26.09■■□□□ 1.77
RNF4-205ENST00000504224 CLASRPQ8N2M8 674 aaKnown RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms