RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 JAG1P78504 1218 aa17.17■□□□□ 0.34
USP11-212ENST00000497179 PDE4BQ07343 736 aa17.17■□□□□ 0.34
USP11-212ENST00000497179 IMMTQ16891 758 aaKnown RBP17.17■□□□□ 0.34
USP11-212ENST00000497179 SHROOM1Q2M3G4 852 aaPredicted RBP17.17■□□□□ 0.34
USP11-212ENST00000497179 ERO1BQ86YB8 467 aa17.17■□□□□ 0.34
USP11-212ENST00000497179 TBC1D10CQ8IV04 446 aa17.17■□□□□ 0.34
USP11-212ENST00000497179 CCDC102AQ96A19 550 aa17.17■□□□□ 0.34
USP11-212ENST00000497179 WNK4Q96J92 1243 aa17.17■□□□□ 0.34
USP11-212ENST00000497179 CCDC17Q96LX7 622 aa17.17■□□□□ 0.34
USP11-212ENST00000497179 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
USP11-212ENST00000497179 ZBTB21Q9ULJ3 1066 aa17.17■□□□□ 0.34
USP11-212ENST00000497179 FAM155AB1AL88 458 aaPredicted RBP17.16■□□□□ 0.34
USP11-212ENST00000497179 REC8O95072 547 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 ASNSP08243 561 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 FGRP09769 529 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
USP11-212ENST00000497179 ECE1P42892 770 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 ABCB5Q2M3G0 1257 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 CYP4F22Q6NT55 531 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 PAXIP1Q6ZW49 1069 aaPredicted RBP17.16■□□□□ 0.34
USP11-212ENST00000497179 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 OPTNQ96CV9 577 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 CAPNS2Q96L46 248 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 MKNK2Q9HBH9 465 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 TACC3Q9Y6A5 838 aa17.16■□□□□ 0.34
USP11-212ENST00000497179 GREB1LQ9C091 1923 aaPredicted RBP17.15■□□□□ 0.34
USP11-212ENST00000497179 PHIPQ8WWQ0 1821 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 ORC4O43929 436 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 PRDM1O75626 825 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 GH2P01242 217 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 ZBTB48P10074 688 aaPredicted RBP17.15■□□□□ 0.34
USP11-212ENST00000497179 AKR1B1P15121 316 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 PTPRAP18433 802 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 GJA5P36382 358 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 PPATQ06203 517 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 PPIL2Q13356 520 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 AKNAD1Q5T1N1 836 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 SPRYD7Q5W111 196 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.15■□□□□ 0.34
USP11-212ENST00000497179 PLIN4Q96Q06 1357 aa17.15■□□□□ 0.34
USP11-212ENST00000497179 EPB41L2O43491 1005 aaKnown RBP17.14■□□□□ 0.33
USP11-212ENST00000497179 CYP21A2P08686 494 aa17.14■□□□□ 0.33
USP11-212ENST00000497179 VEGFBP49765 207 aa17.14■□□□□ 0.33
USP11-212ENST00000497179 TMEM179Q6ZVK1 233 aa17.14■□□□□ 0.33
USP11-212ENST00000497179 OTUD5Q96G74 571 aa17.14■□□□□ 0.33
USP11-212ENST00000497179 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
USP11-212ENST00000497179 RNF41Q9H4P4 317 aaPredicted RBP17.14■□□□□ 0.33
USP11-212ENST00000497179 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
USP11-212ENST00000497179 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.14■□□□□ 0.33
USP11-212ENST00000497179 USP17L5A8MUK1 530 aa17.13■□□□□ 0.33
USP11-212ENST00000497179 MPHOSPH10O00566 681 aaKnown RBP17.13■□□□□ 0.33
USP11-212ENST00000497179 GUCY1A2P33402 732 aa17.13■□□□□ 0.33
USP11-212ENST00000497179 NT5C2P49902 561 aa17.13■□□□□ 0.33
USP11-212ENST00000497179 NOGQ13253 232 aa17.13■□□□□ 0.33
USP11-212ENST00000497179 NECTIN1Q15223 517 aa17.13■□□□□ 0.33
USP11-212ENST00000497179 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
USP11-212ENST00000497179 CCDC84Q86UT8 332 aaPredicted RBP17.13■□□□□ 0.33
USP11-212ENST00000497179 ZNF444Q8N0Y2 327 aaPredicted RBP17.13■□□□□ 0.33
USP11-212ENST00000497179 INCENPQ9NQS7 918 aa17.13■□□□□ 0.33
USP11-212ENST00000497179 NEDD4P46934 1319 aa17.13■□□□□ 0.33
USP11-212ENST00000497179 WDR33Q9C0J8 1336 aaKnown RBP17.13■□□□□ 0.33
USP11-212ENST00000497179 EIF5BO60841 1220 aaKnown RBP17.12■□□□□ 0.33
USP11-212ENST00000497179 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
USP11-212ENST00000497179 DNAJC5GQ8N7S2 189 aa17.12■□□□□ 0.33
USP11-212ENST00000497179 WDR18Q9BV38 432 aa17.12■□□□□ 0.33
USP11-212ENST00000497179 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.12■□□□□ 0.33
USP11-212ENST00000497179 KCNH4Q9UQ05 1017 aa17.12■□□□□ 0.33
USP11-212ENST00000497179 AFG3L2Q9Y4W6 797 aa17.12■□□□□ 0.33
USP11-212ENST00000497179 TAF6LQ9Y6J9 622 aa17.12■□□□□ 0.33
USP11-212ENST00000497179 ZHX2Q9Y6X8 837 aa17.12■□□□□ 0.33
USP11-212ENST00000497179 IGKV6D-41A0A0C4DH26 115 aa17.11■□□□□ 0.33
USP11-212ENST00000497179 IRF6O14896 467 aa17.11■□□□□ 0.33
USP11-212ENST00000497179 SLC27A2O14975 620 aa17.11■□□□□ 0.33
USP11-212ENST00000497179 GRM1Q13255 1194 aa17.11■□□□□ 0.33
USP11-212ENST00000497179 SEPT2Q15019 361 aa17.11■□□□□ 0.33
USP11-212ENST00000497179 RAB3GAP1Q15042 981 aa17.11■□□□□ 0.33
USP11-212ENST00000497179 CREB3L3Q68CJ9 461 aa17.11■□□□□ 0.33
USP11-212ENST00000497179 NEDD1Q8NHV4 660 aa17.11■□□□□ 0.33
USP11-212ENST00000497179 AS3MTQ9HBK9 375 aa17.11■□□□□ 0.33
USP11-212ENST00000497179 CXCL11O14625 94 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
USP11-212ENST00000497179 AOC2O75106 756 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 TSPY3P0CV98 308 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 TSPY8P0CW00 308 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 TFAP4Q01664 338 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 MKRN3Q13064 507 aaKnown RBP17.1■□□□□ 0.33
USP11-212ENST00000497179 FAM47AQ5JRC9 791 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
USP11-212ENST00000497179 RNF20Q5VTR2 975 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 ZNF280CQ8ND82 737 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 CNNM2Q9H8M5 875 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 TOMM22Q9NS69 142 aa17.1■□□□□ 0.33
USP11-212ENST00000497179 MANSC4A6NHS7 340 aaPredicted RBP17.09■□□□□ 0.33
USP11-212ENST00000497179 TSPY2A6NKD2 308 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 E7EWF7 191 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 MAP2K2P36507 400 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 GTF2A2P52657 109 aa17.09■□□□□ 0.33
USP11-212ENST00000497179 KIF23Q02241 960 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms