RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 LOC102724428A0A0B4J2F2 783 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 MPHOSPH10O00566 681 aaKnown RBP15.32■□□□□ 0.04
GPC1-209ENST00000495100 SIK1P57059 783 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 ADGRA1Q86SQ6 560 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 ARGLU1Q9NWB6 273 aaPredicted RBP15.32■□□□□ 0.04
GPC1-209ENST00000495100 RGPD2P0DJD1 1756 aa15.32■□□□□ 0.04
GPC1-209ENST00000495100 CCDC194A0A1B0GVG4 234 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 CIAO1O76071 339 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 CAVIN2O95810 425 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 USP17L8P0C7I0 530 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 CYP19A1P11511 503 aaPredicted RBP15.31■□□□□ 0.04
GPC1-209ENST00000495100 PTGDRQ13258 359 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 WWC2Q6AWC2 1192 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 TOGARAM2Q6ZUX3 1019 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 CCDC102AQ96A19 550 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 CDC5LQ99459 802 aaKnown RBP15.31■□□□□ 0.04
GPC1-209ENST00000495100 C6orf229H3BNL8 230 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 AXDND1Q5T1B0 1012 aaPredicted RBP15.31■□□□□ 0.04
GPC1-209ENST00000495100 ANKRD20A12PQ8NF67 263 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 SLF1Q9BQI6 1058 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 RNF41Q9H4P4 317 aaPredicted RBP15.31■□□□□ 0.04
GPC1-209ENST00000495100 CCDC87Q9NVE4 849 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 TMEM87BQ96K49 555 aa15.31■□□□□ 0.04
GPC1-209ENST00000495100 A0A0U1RQJ8 604 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 NEMFO60524 1076 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 ARID5AQ03989 594 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 LETM2Q2VYF4 491 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 ATRIPQ8WXE1 791 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 POLD4Q9HCU8 107 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 MAN1B1Q9UKM7 699 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 ENC1O14682 589 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 ZMYND10O75800 440 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 UBA7P41226 1012 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 EARS2Q5JPH6 523 aaKnown RBP15.3■□□□□ 0.04
GPC1-209ENST00000495100 NBPF11Q86T75 865 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 C3orf67Q6ZVT6 689 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 ZNF444Q8N0Y2 327 aaPredicted RBP15.3■□□□□ 0.04
GPC1-209ENST00000495100 NWD1Q149M9 1564 aa15.3■□□□□ 0.04
GPC1-209ENST00000495100 PALLDQ8WX93 1383 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 USP17L3A6NCW0 530 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 USP17L4A6NCW7 530 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 ZBTB22O15209 634 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 KRT2P35908 639 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 TFAP4Q01664 338 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 USP17L1Q7RTZ2 530 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 KRT222Q8N1A0 295 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 IGDCC4Q8TDY8 1250 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 TGFBRAP1Q8WUH2 860 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 DEXIO95424 95 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 RNASE9P60153 205 aaKnown RBP15.29■□□□□ 0.04
GPC1-209ENST00000495100 PTF1AQ7RTS3 328 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 ACRBPQ8NEB7 543 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 UBA5Q9GZZ9 404 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 CNNM2Q9H8M5 875 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 GPR108Q9NPR9 543 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 REREQ9P2R6 1566 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 TSPY3P0CV98 308 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 TSPY8P0CW00 308 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 STAT6P42226 847 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
GPC1-209ENST00000495100 JAKMIP3Q5VZ66 844 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 TRIM47Q96LD4 638 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 WDR24Q96S15 920 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 SETDB2Q96T68 719 aa15.29■□□□□ 0.04
GPC1-209ENST00000495100 AKAP12Q02952 1782 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 ZSCAN12O43309 604 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 CUTAO60888 179 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 TXLNAP40222 546 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 UBXN1Q04323 297 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 UBE3CQ15386 1083 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 INF2Q27J81 1249 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 AMOTL1Q8IY63 956 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 PPP2R2CQ9Y2T4 447 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 UTRNP46939 3433 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 IPO7O95373 1038 aaKnown RBP15.28■□□□□ 0.04
GPC1-209ENST00000495100 CASP14P31944 242 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 ZNF397Q8NF99 534 aaPredicted RBP15.28■□□□□ 0.04
GPC1-209ENST00000495100 TBC1D7Q9P0N9 293 aa15.28■□□□□ 0.04
GPC1-209ENST00000495100 A0A1W2PQ27 194 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 A0A1W2PQ64 194 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 A0A1W2PQD8 194 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 TTC38Q5R3I4 469 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
GPC1-209ENST00000495100 NLRP3Q96P20 1036 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 GDAQ9Y2T3 454 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.27■□□□□ 0.04
GPC1-209ENST00000495100 NCAPD2Q15021 1401 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 TRIM49BA6NDI0 452 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 RILPL1Q5EBL4 403 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 DYMQ7RTS9 669 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 HPS3Q969F9 1004 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 CEP131Q9UPN4 1083 aa15.27■□□□□ 0.04
GPC1-209ENST00000495100 KIF5CO60282 957 aa15.27■□□□□ 0.03
GPC1-209ENST00000495100 MMP1P03956 469 aa15.27■□□□□ 0.03
GPC1-209ENST00000495100 ETF1P62495 437 aaKnown RBP15.27■□□□□ 0.03
GPC1-209ENST00000495100 KIAA1328Q86T90 577 aa15.27■□□□□ 0.03
GPC1-209ENST00000495100 CLEC10AQ8IUN9 316 aa15.27■□□□□ 0.03
GPC1-209ENST00000495100 CRACR2BQ8N4Y2 399 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms