RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RNF19AQ9NV58 838 aa7.5□□□□□ -1.21
SMC4-224ENST00000494612 SAMM50Q9Y512 469 aa7.5□□□□□ -1.21
SMC4-224ENST00000494612 PITPNM2Q9BZ72 1349 aa7.5□□□□□ -1.21
SMC4-224ENST00000494612 C1QTNF9P0C862 333 aa7.49□□□□□ -1.21
SMC4-224ENST00000494612 ZNF16P17020 682 aaPredicted RBP7.49□□□□□ -1.21
SMC4-224ENST00000494612 FBF1Q8TES7 1133 aa7.49□□□□□ -1.21
SMC4-224ENST00000494612 CTNND2Q9UQB3 1225 aa7.49□□□□□ -1.21
SMC4-224ENST00000494612 UNCXA6NJT0 531 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.48□□□□□ -1.21
SMC4-224ENST00000494612 FBXO24O75426 580 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 LDHBP07195 334 aaKnown RBP7.48□□□□□ -1.21
SMC4-224ENST00000494612 GLI1P08151 1106 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 CLCN7P51798 805 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 LRRC14Q15048 493 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 LLGL2Q6P1M3 1020 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 PRR23BQ6ZRT6 265 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 ARMCX6Q7L4S7 300 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 FBXO33Q7Z6M2 555 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 KCT2Q8NC54 265 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 PCDHA4Q9UN74 947 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 CYP8B1Q9UNU6 501 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 CNTNAP4Q9C0A0 1308 aa7.48□□□□□ -1.21
SMC4-224ENST00000494612 GIPC1O14908 333 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 LRIG2O94898 1065 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 SLITRK5O94991 958 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 CTSWP56202 376 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 FMR1Q06787 632 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMC4-224ENST00000494612 INPP5AQ14642 412 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 ZNF326Q5BKZ1 582 aaKnown RBP7.47□□□□□ -1.21
SMC4-224ENST00000494612 CDC37L1Q7L3B6 337 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 ZNF507Q8TCN5 953 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 FAM161BQ96MY7 647 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 MAPK8IP1Q9UQF2 711 aa7.47□□□□□ -1.21
SMC4-224ENST00000494612 RBM47A0AV96 593 aaKnown RBP7.46□□□□□ -1.22
SMC4-224ENST00000494612 INHBBP09529 407 aa7.46□□□□□ -1.22
SMC4-224ENST00000494612 PTPN11Q06124 597 aaPredicted RBP7.46□□□□□ -1.22
SMC4-224ENST00000494612 TMEM67Q5HYA8 995 aa7.46□□□□□ -1.22
SMC4-224ENST00000494612 FYB2Q5VWT5 728 aa7.46□□□□□ -1.22
SMC4-224ENST00000494612 CYFIP1Q7L576 1253 aa7.46□□□□□ -1.22
SMC4-224ENST00000494612 AMIGO3Q86WK7 504 aa7.46□□□□□ -1.22
SMC4-224ENST00000494612 FBXO15Q8NCQ5 510 aaPredicted RBP7.46□□□□□ -1.22
SMC4-224ENST00000494612 KIRREL1Q96J84 757 aa7.46□□□□□ -1.22
SMC4-224ENST00000494612 PRDM5Q9NQX1 630 aaPredicted RBP7.46□□□□□ -1.22
SMC4-224ENST00000494612 PICK1Q9NRD5 415 aa7.46□□□□□ -1.22
SMC4-224ENST00000494612 SEMA3GQ9NS98 782 aa7.46□□□□□ -1.22
SMC4-224ENST00000494612 GNAT3A8MTJ3 354 aa7.45□□□□□ -1.22
SMC4-224ENST00000494612 CAP2P40123 477 aa7.45□□□□□ -1.22
SMC4-224ENST00000494612 SLBPQ14493 270 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMC4-224ENST00000494612 LRFN4Q6PJG9 635 aa7.45□□□□□ -1.22
SMC4-224ENST00000494612 C22orf34Q6ZV56 151 aa7.45□□□□□ -1.22
SMC4-224ENST00000494612 DUSP9Q99956 384 aaKnown RBP7.45□□□□□ -1.22
SMC4-224ENST00000494612 PRR33A8MZF0 331 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 NPIPB6E9PJ23 425 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 CELA3AP09093 270 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 TMEM253P0C7T8 217 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 ATP2B2Q01814 1243 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 PCNX4Q63HM2 1172 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 ALG1LQ6GMV1 187 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 FOXQ1Q9C009 403 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 FBRSQ9HAH7 460 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 C19orf73Q9NVV2 129 aa7.44□□□□□ -1.22
SMC4-224ENST00000494612 XPCQ01831 940 aaPredicted RBP7.43□□□□□ -1.22
SMC4-224ENST00000494612 CIAPIN1Q6FI81 312 aa7.43□□□□□ -1.22
SMC4-224ENST00000494612 ELMO3Q96BJ8 720 aa7.43□□□□□ -1.22
SMC4-224ENST00000494612 MRRFQ96E11 262 aaKnown RBP7.43□□□□□ -1.22
SMC4-224ENST00000494612 HSPA12BQ96MM6 686 aa7.43□□□□□ -1.22
SMC4-224ENST00000494612 WNT10AQ9GZT5 417 aa7.43□□□□□ -1.22
SMC4-224ENST00000494612 ATP13A1Q9HD20 1204 aa7.43□□□□□ -1.22
SMC4-224ENST00000494612 PARP2Q9UGN5 583 aa7.43□□□□□ -1.22
SMC4-224ENST00000494612 E9PSI1 815 aa7.42□□□□□ -1.22
SMC4-224ENST00000494612 NKG7Q16617 165 aa7.42□□□□□ -1.22
SMC4-224ENST00000494612 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
SMC4-224ENST00000494612 GAL3ST3Q96A11 431 aa7.42□□□□□ -1.22
SMC4-224ENST00000494612 PLPPR2Q96GM1 343 aa7.42□□□□□ -1.22
SMC4-224ENST00000494612 DIRC2Q96SL1 478 aa7.42□□□□□ -1.22
SMC4-224ENST00000494612 C12orf49Q9H741 205 aa7.42□□□□□ -1.22
SMC4-224ENST00000494612 CARS2Q9HA77 564 aaKnown RBP7.42□□□□□ -1.22
SMC4-224ENST00000494612 ST14Q9Y5Y6 855 aa7.42□□□□□ -1.22
SMC4-224ENST00000494612 KRT1P04264 644 aa7.41□□□□□ -1.22
SMC4-224ENST00000494612 HDXQ7Z353 690 aa7.41□□□□□ -1.22
SMC4-224ENST00000494612 MFSD2AQ8NA29 543 aa7.41□□□□□ -1.22
SMC4-224ENST00000494612 NSUN3Q9H649 340 aaKnown RBP7.41□□□□□ -1.22
SMC4-224ENST00000494612 KIAA1522Q9P206 1035 aaPredicted RBP7.41□□□□□ -1.22
SMC4-224ENST00000494612 FAM8A1Q9UBU6 413 aa7.41□□□□□ -1.22
SMC4-224ENST00000494612 PRPF40AO75400 957 aaKnown RBP7.4□□□□□ -1.22
SMC4-224ENST00000494612 KCNA10Q16322 511 aa7.4□□□□□ -1.22
SMC4-224ENST00000494612 SFRP5Q5T4F7 317 aa7.4□□□□□ -1.22
SMC4-224ENST00000494612 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.4□□□□□ -1.22
SMC4-224ENST00000494612 SV2BQ7L1I2 683 aa7.4□□□□□ -1.22
SMC4-224ENST00000494612 SPG7Q9UQ90 795 aa7.4□□□□□ -1.22
SMC4-224ENST00000494612 SNCAIPQ9Y6H5 919 aa7.4□□□□□ -1.22
SMC4-224ENST00000494612 CAPN6Q9Y6Q1 641 aa7.4□□□□□ -1.22
SMC4-224ENST00000494612 PRAMEF27A3QJZ7 478 aa7.39□□□□□ -1.23
SMC4-224ENST00000494612 TCAF2A6NFQ2 919 aa7.39□□□□□ -1.23
SMC4-224ENST00000494612 FAM155AB1AL88 458 aaPredicted RBP7.39□□□□□ -1.23
SMC4-224ENST00000494612 RBAK-RBAKDNI3L0D1 243 aa7.39□□□□□ -1.23
SMC4-224ENST00000494612 USP17L7P0C7H9 530 aa7.39□□□□□ -1.23
SMC4-224ENST00000494612 GDNFP39905 211 aa7.39□□□□□ -1.23
SMC4-224ENST00000494612 CDK8P49336 464 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms