RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SPATA32Q96LK8 384 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 MKNK2Q9HBH9 465 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 RBM28Q9NW13 759 aaKnown RBP10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 TMEM63CQ9P1W3 806 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 CFAP45Q9UL16 551 aa10.64□□□□□ -0.71
SMARCC1-208ENST00000492896 GREB1LQ9C091 1923 aaPredicted RBP10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 MYH4Q9Y623 1939 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 PPIP5K2O43314 1243 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 AOC3Q16853 763 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 DACT2Q5SW24 774 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 HHIPL2Q6UWX4 724 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 C16orf86Q6ZW13 317 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 BRAPQ7Z569 592 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 FANCBQ8NB91 859 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 DYNLL2Q96FJ2 89 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 MXD3Q9BW11 206 aa10.63□□□□□ -0.71
SMARCC1-208ENST00000492896 USP17L3A6NCW0 530 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 USP17L4A6NCW7 530 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 C21orf2O43822 256 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 DEXIO95424 95 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 TSPY3P0CV98 308 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 TSPY8P0CW00 308 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 DPEP1P16444 411 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 CRKP46108 304 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 SCNN1DP51172 638 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 PLCD1P51178 756 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 TFAP4Q01664 338 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 KIF23Q02241 960 aaPredicted RBP10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 CCDC183Q5T5S1 534 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 KRT40Q6A162 431 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 OTUD7BQ6GQQ9 843 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 USP17L1Q7RTZ2 530 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 NBPF11Q86T75 865 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 RTKN2Q8IZC4 609 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 ZNF444Q8N0Y2 327 aaPredicted RBP10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 SLC44A5Q8NCS7 719 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 CTCFLQ8NI51 663 aaPredicted RBP10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 AIFM3Q96NN9 605 aa10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 RNF26Q9BY78 433 aaPredicted RBP10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 TFIP11Q9UBB9 837 aaKnown RBP10.62□□□□□ -0.71
SMARCC1-208ENST00000492896 GOLGA6L4A6NEF3 574 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 NMT2O60551 498 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 RASA1P20936 1047 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 POLD1P28340 1107 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 CDK8P49336 464 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 MRE11P49959 708 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 HDLBPQ00341 1268 aaKnown RBP10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 AKAP17AQ02040 695 aaKnown RBP10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 TROAPQ12815 778 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 PICALMQ13492 652 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 SOGA3Q5TF21 947 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 ILDR1Q86SU0 546 aaPredicted RBP10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 DGKHQ86XP1 1220 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 CRACR2BQ8N4Y2 399 aaPredicted RBP10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 ANKS1AQ92625 1134 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 ZDHHC15Q96MV8 337 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 USP28Q96RU2 1077 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 PSMD1Q99460 953 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 KAT14Q9H8E8 782 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 TCP11L1Q9NUJ3 509 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 USP40Q9NVE5 1235 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 PLIN4Q96Q06 1357 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 ARFGEF1Q9Y6D6 1849 aa10.61□□□□□ -0.71
SMARCC1-208ENST00000492896 CNTNAP5Q8WYK1 1306 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 SYCE3A1L190 88 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 WDHD1O75717 1129 aaPredicted RBP10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 KIF5BP33176 963 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 GNL2Q13823 731 aaKnown RBP10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 SAFBQ15424 915 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 TPRNQ4KMQ1 711 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 MYSM1Q5VVJ2 828 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 RCSD1Q6JBY9 416 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 CDC42EP5Q6NZY7 148 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 LRSAM1Q6UWE0 723 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 TMTC3Q6ZXV5 915 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 KIAA0825Q8IV33 1275 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 BICD2Q8TD16 824 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 MRIQ9BWK5 157 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 MTFR1LQ9H019 292 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 OSBPL5Q9H0X9 879 aaPredicted RBP10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 GRPEL1Q9HAV7 217 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 GJB4Q9NTQ9 266 aa10.6□□□□□ -0.71
SMARCC1-208ENST00000492896 MYO3BQ8WXR4 1341 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 KIF28PB7ZC32 967 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 PRPF3O43395 683 aaKnown RBP10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 LETM1O95202 739 aaPredicted RBP10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 ZBTB7AO95365 584 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 PLEKHA8P1O95397 391 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 YEATS4O95619 227 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 HLA-DOAP06340 250 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 XBP1P17861 261 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 KCNA3P22001 575 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 TGFB2P61812 414 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 GRM4Q14833 912 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 APOBEC3HQ6NTF7 200 aaKnown RBP10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 GAS2L3Q86XJ1 694 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 CMTR1Q8N1G2 835 aaKnown RBP10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 PNMA1Q8ND90 353 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 NEDD1Q8NHV4 660 aa10.59□□□□□ -0.71
SMARCC1-208ENST00000492896 MAP3K14Q99558 947 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms