RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
GCA-210ENST00000487445 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
GCA-210ENST00000487445 HIRAP54198 1017 aaPredicted RBP17.04■□□□□ 0.32
GCA-210ENST00000487445 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
GCA-210ENST00000487445 FAM83AQ86UY5 434 aa17.04■□□□□ 0.32
GCA-210ENST00000487445 CDAN1Q8IWY9 1227 aa17.04■□□□□ 0.32
GCA-210ENST00000487445 ADARB2Q9NS39 739 aaKnown RBP17.04■□□□□ 0.32
GCA-210ENST00000487445 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
GCA-210ENST00000487445 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 GLTPD2A6NH11 291 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 DTNBO60941 627 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 CCT2P78371 535 aaKnown RBP17.03■□□□□ 0.32
GCA-210ENST00000487445 ENAHQ8N8S7 591 aaPredicted RBP17.03■□□□□ 0.32
GCA-210ENST00000487445 DNAJC18Q9H819 358 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 PDIA3P30101 505 aaKnown RBP17.03■□□□□ 0.32
GCA-210ENST00000487445 SHMT1P34896 483 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 LIFRP42702 1097 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 CUL4AQ13619 759 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 IFIT1BQ5T764 474 aaKnown RBP17.03■□□□□ 0.32
GCA-210ENST00000487445 ZNF274Q96GC6 653 aaPredicted RBP17.03■□□□□ 0.32
GCA-210ENST00000487445 MTA3Q9BTC8 594 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 GGA3Q9NZ52 723 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 SLC12A7Q9Y666 1083 aa17.03■□□□□ 0.32
GCA-210ENST00000487445 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.32
GCA-210ENST00000487445 ZC3H4Q9UPT8 1303 aaKnown RBP17.02■□□□□ 0.32
GCA-210ENST00000487445 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.31
GCA-210ENST00000487445 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.31
GCA-210ENST00000487445 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.31
GCA-210ENST00000487445 TMTC2Q8N394 836 aa17.02■□□□□ 0.31
GCA-210ENST00000487445 MYL10Q9BUA6 226 aa17.02■□□□□ 0.31
GCA-210ENST00000487445 DEFB129Q9H1M3 183 aa17.02■□□□□ 0.31
GCA-210ENST00000487445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.02■□□□□ 0.31
GCA-210ENST00000487445 AKR1B1P15121 316 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 RXRAP19793 462 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 NT5C2P49902 561 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 SEC23AQ15436 765 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 SGMS1Q86VZ5 419 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 IL17RBQ9NRM6 502 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
GCA-210ENST00000487445 EVCP57679 992 aa17■□□□□ 0.31
GCA-210ENST00000487445 ST3GAL1Q11201 340 aa17■□□□□ 0.31
GCA-210ENST00000487445 SCRN1Q12765 414 aa17■□□□□ 0.31
GCA-210ENST00000487445 CERKLQ49MI3 558 aaPredicted RBP17■□□□□ 0.31
GCA-210ENST00000487445 APOA5Q6Q788 366 aa17■□□□□ 0.31
GCA-210ENST00000487445 CCDC144CPQ8IYA2 1237 aa17■□□□□ 0.31
GCA-210ENST00000487445 NEDD1Q8NHV4 660 aa17■□□□□ 0.31
GCA-210ENST00000487445 L3MBTL3Q96JM7 780 aaPredicted RBP17■□□□□ 0.31
GCA-210ENST00000487445 NCOA5Q9HCD5 579 aaKnown RBP17■□□□□ 0.31
GCA-210ENST00000487445 SBF1O95248 1867 aa17■□□□□ 0.31
GCA-210ENST00000487445 LAMA4Q16363 1823 aa17■□□□□ 0.31
GCA-210ENST00000487445 PFKFB2O60825 505 aa17■□□□□ 0.31
GCA-210ENST00000487445 APOBEC3FQ8IUX4 373 aaKnown RBP17■□□□□ 0.31
GCA-210ENST00000487445 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
GCA-210ENST00000487445 GTF3C6Q969F1 213 aa17■□□□□ 0.31
GCA-210ENST00000487445 HERC5Q9UII4 1024 aaKnown RBP17■□□□□ 0.31
GCA-210ENST00000487445 ZSCAN21Q9Y5A6 473 aaPredicted RBP17■□□□□ 0.31
GCA-210ENST00000487445 ZBTB43O43298 467 aa16.99■□□□□ 0.31
GCA-210ENST00000487445 EPHX2P34913 555 aa16.99■□□□□ 0.31
GCA-210ENST00000487445 PRAMEF18Q5VWM3 479 aa16.99■□□□□ 0.31
GCA-210ENST00000487445 INTS4Q96HW7 963 aaKnown RBP16.99■□□□□ 0.31
GCA-210ENST00000487445 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
GCA-210ENST00000487445 GDF11O95390 407 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 METAP2P50579 478 aaKnown RBP eCLIP16.98■□□□□ 0.31
GCA-210ENST00000487445 CCDC178Q5BJE1 867 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 METTL16Q86W50 562 aaKnown RBP16.98■□□□□ 0.31
GCA-210ENST00000487445 DGKHQ86XP1 1220 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 CCDC17Q96LX7 622 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 KAT14Q9H8E8 782 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 PGAP2Q9UHJ9 254 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 SMC3Q9UQE7 1217 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 COL2A1P02458 1487 aaPredicted RBP16.98■□□□□ 0.31
GCA-210ENST00000487445 DDX60LQ5H9U9 1706 aaKnown RBP16.98■□□□□ 0.31
GCA-210ENST00000487445 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 EAPPQ56P03 285 aaPredicted RBP16.98■□□□□ 0.31
GCA-210ENST00000487445 RCSD1Q6JBY9 416 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 CATIPQ7Z7H3 387 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 ZNF654Q8IZM8 581 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 TEPSINQ96N21 525 aa16.98■□□□□ 0.31
GCA-210ENST00000487445 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.98■□□□□ 0.31
GCA-210ENST00000487445 IQCA1LA6NCM1 817 aa16.97■□□□□ 0.31
GCA-210ENST00000487445 GOLGA8AA7E2F4 631 aa16.97■□□□□ 0.31
GCA-210ENST00000487445 SHROOM1Q2M3G4 852 aaPredicted RBP16.97■□□□□ 0.31
GCA-210ENST00000487445 NBPF12Q5TAG4 269 aaPredicted RBP16.97■□□□□ 0.31
GCA-210ENST00000487445 CLEC10AQ8IUN9 316 aa16.97■□□□□ 0.31
GCA-210ENST00000487445 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
GCA-210ENST00000487445 CHMP4CQ96CF2 233 aa16.97■□□□□ 0.31
GCA-210ENST00000487445 MTMR7Q9Y216 660 aa16.97■□□□□ 0.31
GCA-210ENST00000487445 DICER1Q9UPY3 1922 aaKnown RBP16.97■□□□□ 0.31
GCA-210ENST00000487445 CPLX1O14810 134 aa16.96■□□□□ 0.31
GCA-210ENST00000487445 ATP2B2Q01814 1243 aa16.96■□□□□ 0.31
GCA-210ENST00000487445 ABCB5Q2M3G0 1257 aa16.96■□□□□ 0.31
GCA-210ENST00000487445 USP50Q70EL3 339 aaPredicted RBP16.96■□□□□ 0.31
GCA-210ENST00000487445 CWC22Q9HCG8 908 aaKnown RBP16.96■□□□□ 0.31
GCA-210ENST00000487445 TAOK2Q9UL54 1235 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms