RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 DDX4Q9NQI0 724 aaKnown RBP21.61■■□□□ 1.05
NECTIN3-206ENST00000485303 KCNA3P22001 575 aa21.6■■□□□ 1.05
NECTIN3-206ENST00000485303 TGFB2P61812 414 aa21.6■■□□□ 1.05
NECTIN3-206ENST00000485303 DLGAP5Q15398 846 aa21.6■■□□□ 1.05
NECTIN3-206ENST00000485303 SBK1Q52WX2 424 aa21.6■■□□□ 1.05
NECTIN3-206ENST00000485303 SAMD1Q6SPF0 538 aaPredicted RBP21.6■■□□□ 1.05
NECTIN3-206ENST00000485303 RASSF7Q02833 373 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 SF3A1Q15459 793 aaKnown RBP21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 SOGA3Q5TF21 947 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 NLGN2Q8NFZ4 835 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 ARHGAP27Q6ZUM4 889 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 SPATA32Q96LK8 384 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 SUGT1Q9Y2Z0 365 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 GADD45BO75293 160 aaPredicted RBP21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 C10orf71Q711Q0 1435 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 CLEC10AQ8IUN9 316 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 WDR19Q8NEZ3 1342 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 VAT1LQ9HCJ6 419 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 LMBRD1Q9NUN5 540 aa21.59■■□□□ 1.05
NECTIN3-206ENST00000485303 COL11A2P13942 1736 aaPredicted RBP21.58■■□□□ 1.05
NECTIN3-206ENST00000485303 BAZ2BQ9UIF8 2168 aaKnown RBP21.58■■□□□ 1.05
NECTIN3-206ENST00000485303 SMARCC2Q8TAQ2 1214 aa21.58■■□□□ 1.05
NECTIN3-206ENST00000485303 GAKO14976 1311 aa21.58■■□□□ 1.04
NECTIN3-206ENST00000485303 APOBEC3HQ6NTF7 200 aaKnown RBP21.58■■□□□ 1.04
NECTIN3-206ENST00000485303 TMED8Q6PL24 325 aaPredicted RBP21.58■■□□□ 1.04
NECTIN3-206ENST00000485303 SGMS1Q86VZ5 419 aa21.58■■□□□ 1.04
NECTIN3-206ENST00000485303 BICD2Q8TD16 824 aa21.58■■□□□ 1.04
NECTIN3-206ENST00000485303 SAFBQ15424 915 aaKnown RBP eCLIP21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 CSPP1Q1MSJ5 1256 aa21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 SERPINB13Q9UIV8 391 aa21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 GOLGA8HP0CJ92 632 aa21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 FDPSP14324 419 aaKnown RBP21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 ZFPM1Q8IX07 1006 aa21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 PNMA1Q8ND90 353 aa21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 ZNRF3Q9ULT6 936 aa21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 V9GY48 417 aaPredicted RBP21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 WDHD1O75717 1129 aaPredicted RBP21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 HHIPL2Q6UWX4 724 aa21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 PRMT6Q96LA8 375 aaPredicted RBP21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 KCNJ14Q9UNX9 436 aa21.57■■□□□ 1.04
NECTIN3-206ENST00000485303 UTRNP46939 3433 aa21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 ORC4O43929 436 aa21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 PLEKHA8P1O95397 391 aa21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 PCP11498 1178 aaKnown RBP21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 FAM163AQ96GL9 167 aaPredicted RBP21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 SPON1Q9HCB6 807 aa21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 A0A1B0GUL6 1792 aa21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 HOMER1Q86YM7 354 aa21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 FTOQ9C0B1 505 aaKnown RBP eCLIP21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 MYH2Q9UKX2 1941 aa21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 RSBN1LQ6PCB5 846 aaPredicted RBP21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.56■■□□□ 1.04
NECTIN3-206ENST00000485303 CIAPIN1Q6FI81 312 aa21.55■■□□□ 1.04
NECTIN3-206ENST00000485303 LRRC47Q8N1G4 583 aaKnown RBP21.55■■□□□ 1.04
NECTIN3-206ENST00000485303 OSBPL5Q9H0X9 879 aaPredicted RBP21.55■■□□□ 1.04
NECTIN3-206ENST00000485303 DOCK2Q92608 1830 aa21.55■■□□□ 1.04
NECTIN3-206ENST00000485303 RASA1P20936 1047 aa21.54■■□□□ 1.04
NECTIN3-206ENST00000485303 CPVLQ9H3G5 476 aa21.54■■□□□ 1.04
NECTIN3-206ENST00000485303 CXCL9Q07325 125 aa21.54■■□□□ 1.04
NECTIN3-206ENST00000485303 KRT40Q6A162 431 aa21.54■■□□□ 1.04
NECTIN3-206ENST00000485303 PSMD1Q99460 953 aa21.54■■□□□ 1.04
NECTIN3-206ENST00000485303 GUCY1A2P33402 732 aa21.53■■□□□ 1.04
NECTIN3-206ENST00000485303 CHD4Q14839 1912 aa21.53■■□□□ 1.04
NECTIN3-206ENST00000485303 SEC23AQ15436 765 aa21.53■■□□□ 1.04
NECTIN3-206ENST00000485303 CCDC88AQ3V6T2 1871 aa21.53■■□□□ 1.04
NECTIN3-206ENST00000485303 MYO1BO43795 1136 aa21.53■■□□□ 1.04
NECTIN3-206ENST00000485303 ZDHHC15Q96MV8 337 aa21.53■■□□□ 1.04
NECTIN3-206ENST00000485303 CLIP2Q9UDT6 1046 aa21.53■■□□□ 1.04
NECTIN3-206ENST00000485303 MKRN1Q9UHC7 482 aaKnown RBP21.53■■□□□ 1.04
NECTIN3-206ENST00000485303 KIF5BP33176 963 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 ME1P48163 572 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 EVCP57679 992 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 STK38Q15208 465 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 WASF1Q92558 559 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 VPS54Q9P1Q0 977 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 GDF11O95390 407 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 AKR1B1P15121 316 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 XBP1P17861 261 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 IKQ13123 557 aaPredicted RBP21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 CCDC96Q2M329 555 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 RASGRP2Q7LDG7 609 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 CEP95Q96GE4 821 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 CSRNP1Q96S65 589 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 ZSCAN16Q9H4T2 348 aaPredicted RBP21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 PDIA4P13667 645 aaKnown RBP21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 FBXO18Q8NFZ0 1043 aa21.52■■□□□ 1.04
NECTIN3-206ENST00000485303 DUOX1Q9NRD9 1551 aa21.52■■□□□ 1.03
NECTIN3-206ENST00000485303 CALM1P0DP23 149 aa21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 CALM2P0DP24 149 aa21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 CALM3P0DP25 149 aa21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 GRIPAP1Q4V328 841 aa21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 ZNF396Q96N95 335 aaPredicted RBP21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 MBD3O95983 291 aa21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 KLHL40Q2TBA0 621 aa21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 LAMA4Q16363 1823 aa21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 C16orf86Q6ZW13 317 aa21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 FBXL16Q8N461 479 aa21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 FAM217BQ9NTX9 383 aaPredicted RBP21.51■■□□□ 1.03
NECTIN3-206ENST00000485303 DDTLA6NHG4 134 aaPredicted RBP21.5■■□□□ 1.03
NECTIN3-206ENST00000485303 GPT2Q8TD30 523 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms