RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 AACSQ86V21 672 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 RHPN1Q8TCX5 695 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 EHD4Q9H223 541 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 TMOD4Q9NZQ9 345 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 EXOC6BQ9Y2D4 811 aa13.97□□□□□ -0.17
SCFD1-206ENST00000484733 MAGEB6Q8N7X4 407 aa13.96□□□□□ -0.17
SCFD1-206ENST00000484733 ZBTB21Q9ULJ3 1066 aa13.96□□□□□ -0.17
SCFD1-206ENST00000484733 USP17L10C9JJH3 530 aa13.96□□□□□ -0.18
SCFD1-206ENST00000484733 SGPL1O95470 568 aa13.96□□□□□ -0.18
SCFD1-206ENST00000484733 TTF1Q15361 905 aaPredicted RBP13.96□□□□□ -0.18
SCFD1-206ENST00000484733 TATDN1Q6P1N9 297 aa13.96□□□□□ -0.18
SCFD1-206ENST00000484733 UNC93B1Q9H1C4 597 aa13.96□□□□□ -0.18
SCFD1-206ENST00000484733 ANTXR1Q9H6X2 564 aa13.96□□□□□ -0.18
SCFD1-206ENST00000484733 SAP30BPQ9UHR5 308 aaKnown RBP13.96□□□□□ -0.18
SCFD1-206ENST00000484733 INHAP05111 366 aa13.95□□□□□ -0.18
SCFD1-206ENST00000484733 MTMR2Q13614 643 aa13.95□□□□□ -0.18
SCFD1-206ENST00000484733 GTF3C2Q8WUA4 911 aaPredicted RBP13.95□□□□□ -0.18
SCFD1-206ENST00000484733 GJD2Q9UKL4 321 aa13.95□□□□□ -0.18
SCFD1-206ENST00000484733 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
SCFD1-206ENST00000484733 U2AF1L4Q8WU68 220 aaKnown RBP13.95□□□□□ -0.18
SCFD1-206ENST00000484733 KIF1BPQ96EK5 621 aa13.95□□□□□ -0.18
SCFD1-206ENST00000484733 CHMP4BQ9H444 224 aaKnown RBP13.95□□□□□ -0.18
SCFD1-206ENST00000484733 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
SCFD1-206ENST00000484733 HMMRO75330 724 aa13.94□□□□□ -0.18
SCFD1-206ENST00000484733 ELNP15502 786 aa13.94□□□□□ -0.18
SCFD1-206ENST00000484733 USP5P45974 858 aa13.94□□□□□ -0.18
SCFD1-206ENST00000484733 IRX3P78415 501 aaPredicted RBP13.94□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L2Q6R6M4 530 aa13.94□□□□□ -0.18
SCFD1-206ENST00000484733 TTC6Q86TZ1 520 aa13.94□□□□□ -0.18
SCFD1-206ENST00000484733 MIGA1Q8NAN2 632 aa13.94□□□□□ -0.18
SCFD1-206ENST00000484733 RIOK1Q9BRS2 568 aaKnown RBP13.94□□□□□ -0.18
SCFD1-206ENST00000484733 HTATIP2Q9BUP3 242 aa13.94□□□□□ -0.18
SCFD1-206ENST00000484733 PAK6Q9NQU5 681 aaPredicted RBP13.94□□□□□ -0.18
SCFD1-206ENST00000484733 DOCK3Q8IZD9 2030 aa13.94□□□□□ -0.18
SCFD1-206ENST00000484733 RAB11FIP3O75154 756 aa13.93□□□□□ -0.18
SCFD1-206ENST00000484733 GDF11O95390 407 aa13.93□□□□□ -0.18
SCFD1-206ENST00000484733 CLASRPQ8N2M8 674 aaKnown RBP13.93□□□□□ -0.18
SCFD1-206ENST00000484733 C12orf42Q96LP6 360 aa13.93□□□□□ -0.18
SCFD1-206ENST00000484733 P2RX7Q99572 595 aaKnown RBP13.93□□□□□ -0.18
SCFD1-206ENST00000484733 CRISPLD2Q9H0B8 497 aa13.93□□□□□ -0.18
SCFD1-206ENST00000484733 PLXNB2O15031 1838 aa13.93□□□□□ -0.18
SCFD1-206ENST00000484733 DDX60LQ5H9U9 1706 aaKnown RBP13.93□□□□□ -0.18
SCFD1-206ENST00000484733 IL1RAPL2Q9NP60 686 aa13.93□□□□□ -0.18
SCFD1-206ENST00000484733 EMILIN3Q9NT22 766 aa13.93□□□□□ -0.18
SCFD1-206ENST00000484733 SERPINB13Q9UIV8 391 aa13.93□□□□□ -0.18
SCFD1-206ENST00000484733 NDUFB9Q9Y6M9 179 aa13.93□□□□□ -0.18
SCFD1-206ENST00000484733 H0YGN5 161 aa13.92□□□□□ -0.18
SCFD1-206ENST00000484733 HERVK_113P62684 666 aa13.92□□□□□ -0.18
SCFD1-206ENST00000484733 SHROOM1Q2M3G4 852 aaPredicted RBP13.92□□□□□ -0.18
SCFD1-206ENST00000484733 SIRT2Q8IXJ6 389 aa13.92□□□□□ -0.18
SCFD1-206ENST00000484733 TAOK2Q9UL54 1235 aa13.92□□□□□ -0.18
SCFD1-206ENST00000484733 MAGEB6P1A0A0J9YX57 407 aa13.92□□□□□ -0.18
SCFD1-206ENST00000484733 FARP2O94887 1054 aaPredicted RBP13.92□□□□□ -0.18
SCFD1-206ENST00000484733 GH2P01242 217 aa13.92□□□□□ -0.18
SCFD1-206ENST00000484733 HMGCRP04035 888 aa13.92□□□□□ -0.18
SCFD1-206ENST00000484733 GPRC5AQ8NFJ5 357 aa13.92□□□□□ -0.18
SCFD1-206ENST00000484733 RBPJLQ9UBG7 517 aa13.91□□□□□ -0.18
SCFD1-206ENST00000484733 IFIT2P09913 472 aaKnown RBP13.91□□□□□ -0.18
SCFD1-206ENST00000484733 PDE6AP16499 860 aa13.91□□□□□ -0.18
SCFD1-206ENST00000484733 MAPK4P31152 587 aa13.91□□□□□ -0.18
SCFD1-206ENST00000484733 USP14P54578 494 aa13.91□□□□□ -0.18
SCFD1-206ENST00000484733 CERKLQ49MI3 558 aaPredicted RBP13.91□□□□□ -0.18
SCFD1-206ENST00000484733 DPF3Q92784 378 aa13.91□□□□□ -0.18
SCFD1-206ENST00000484733 COLQQ9Y215 455 aaPredicted RBP13.91□□□□□ -0.18
SCFD1-206ENST00000484733 COG6Q9Y2V7 657 aa13.91□□□□□ -0.18
SCFD1-206ENST00000484733 NAV1Q8NEY1 1877 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 TCRBV5S4A2TA0A5A2 114 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 TFRCP02786 760 aaKnown RBP13.9□□□□□ -0.18
SCFD1-206ENST00000484733 XRCC5P13010 732 aaKnown RBP13.9□□□□□ -0.18
SCFD1-206ENST00000484733 GABPAQ06546 454 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 SLC9C2Q5TAH2 1124 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 TRMT44Q8IYL2 757 aaKnown RBP13.9□□□□□ -0.18
SCFD1-206ENST00000484733 ANKLE1Q8NAG6 615 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 DEFB118Q96PH6 123 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 CRNKL1Q9BZJ0 848 aaKnown RBP13.9□□□□□ -0.18
SCFD1-206ENST00000484733 KIAA1683Q9H0B3 1180 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.9□□□□□ -0.18
SCFD1-206ENST00000484733 TXNRD2Q9NNW7 524 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 CENPFP49454 3210 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L15C9J2P7 530 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L13C9JLJ4 530 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L11C9JVI0 530 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L18D6R9N7 530 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L22D6RA61 530 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L17D6RBQ6 530 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L19D6RCP7 530 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L20D6RJB6 530 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 SHMT1P34896 483 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP17L24Q0WX57 530 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 ABCB5Q2M3G0 1257 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 SOCS4Q8WXH5 440 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 USP6NLQ92738 828 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 CABP5Q9NP86 173 aa13.9□□□□□ -0.18
SCFD1-206ENST00000484733 RPTORQ8N122 1335 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 PLCD1P51178 756 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 ERVK-9P63128 1117 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 ERVK-24P63145 666 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 NUDT12Q9BQG2 462 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 RCAN3Q9UKA8 241 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 ZNF532Q9HCE3 1301 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms