RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
CLK3-204ENST00000483723 CALM1P0DP23 149 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 CALM2P0DP24 149 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 CALM3P0DP25 149 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 RASA1P20936 1047 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 CDK8P49336 464 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 KRT85P78386 507 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 TFAP4Q01664 338 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 C8orf76Q96K31 380 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 IL17RBQ9NRM6 502 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 SERPINA10Q9UK55 444 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 ELP1O95163 1332 aa16.37■□□□□ 0.21
CLK3-204ENST00000483723 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 GADD45BO75293 160 aaPredicted RBP16.36■□□□□ 0.21
CLK3-204ENST00000483723 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
CLK3-204ENST00000483723 DDAH1O94760 285 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 GABPAQ06546 454 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 R3HDM1Q15032 1099 aaKnown RBP16.36■□□□□ 0.21
CLK3-204ENST00000483723 FAM173BQ6P4H8 233 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 CATIPQ7Z7H3 387 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
CLK3-204ENST00000483723 CRACR2BQ8N4Y2 399 aaPredicted RBP16.36■□□□□ 0.21
CLK3-204ENST00000483723 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 DDX4Q9NQI0 724 aaKnown RBP16.36■□□□□ 0.21
CLK3-204ENST00000483723 DEKP35659 375 aaKnown RBP16.36■□□□□ 0.21
CLK3-204ENST00000483723 SSRP1Q08945 709 aaKnown RBP16.36■□□□□ 0.21
CLK3-204ENST00000483723 ATL3Q6DD88 541 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 TTC6Q86TZ1 520 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 KIAA0825Q8IV33 1275 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 PHKBQ93100 1093 aa16.36■□□□□ 0.21
CLK3-204ENST00000483723 NMT2O60551 498 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 NOVP48745 357 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 UBE2HP62256 183 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 FUT2Q10981 343 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 SLC4A8Q2Y0W8 1093 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 SLC44A5Q8NCS7 719 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 MAP3K14Q99558 947 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 ALG1Q9BT22 464 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 SCAND2PQ9GZW5 306 aaPredicted RBP16.35■□□□□ 0.21
CLK3-204ENST00000483723 GZF1Q9H116 711 aaPredicted RBP16.35■□□□□ 0.21
CLK3-204ENST00000483723 RBM28Q9NW13 759 aaKnown RBP16.35■□□□□ 0.21
CLK3-204ENST00000483723 CD2APQ9Y5K6 639 aa16.35■□□□□ 0.21
CLK3-204ENST00000483723 FER1L6Q2WGJ9 1857 aa16.34■□□□□ 0.21
CLK3-204ENST00000483723 FIBPO43427 364 aa16.34■□□□□ 0.21
CLK3-204ENST00000483723 VIL1P09327 827 aaKnown RBP16.34■□□□□ 0.21
CLK3-204ENST00000483723 NUP133Q8WUM0 1156 aa16.34■□□□□ 0.21
CLK3-204ENST00000483723 GMLQ99445 158 aa16.34■□□□□ 0.21
CLK3-204ENST00000483723 IDI2Q9BXS1 227 aa16.34■□□□□ 0.21
CLK3-204ENST00000483723 OSBPL5Q9H0X9 879 aaPredicted RBP16.34■□□□□ 0.21
CLK3-204ENST00000483723 COL4A5P29400 1685 aa16.34■□□□□ 0.21
CLK3-204ENST00000483723 MYO3BQ8WXR4 1341 aa16.34■□□□□ 0.21
CLK3-204ENST00000483723 NCLP19338 710 aaKnown RBP16.33■□□□□ 0.21
CLK3-204ENST00000483723 GUCY1B3Q02153 619 aa16.33■□□□□ 0.21
CLK3-204ENST00000483723 DALRD3Q5D0E6 543 aaKnown RBP16.33■□□□□ 0.21
CLK3-204ENST00000483723 OTUD7BQ6GQQ9 843 aa16.33■□□□□ 0.21
CLK3-204ENST00000483723 WASF1Q92558 559 aa16.33■□□□□ 0.21
CLK3-204ENST00000483723 SLC26A6Q9BXS9 759 aa16.33■□□□□ 0.21
CLK3-204ENST00000483723 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.21
CLK3-204ENST00000483723 DEXIO95424 95 aa16.33■□□□□ 0.2
CLK3-204ENST00000483723 TSPY3P0CV98 308 aa16.33■□□□□ 0.2
CLK3-204ENST00000483723 TSPY8P0CW00 308 aa16.33■□□□□ 0.2
CLK3-204ENST00000483723 FOSBP53539 338 aa16.33■□□□□ 0.2
CLK3-204ENST00000483723 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.2
CLK3-204ENST00000483723 LARGE2Q8N3Y3 721 aa16.33■□□□□ 0.2
CLK3-204ENST00000483723 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
CLK3-204ENST00000483723 ZNF277Q9NRM2 450 aaPredicted RBP16.33■□□□□ 0.2
CLK3-204ENST00000483723 TFIP11Q9UBB9 837 aaKnown RBP16.33■□□□□ 0.2
CLK3-204ENST00000483723 CFAP45Q9UL16 551 aa16.33■□□□□ 0.2
CLK3-204ENST00000483723 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.2
CLK3-204ENST00000483723 FSD2A1L4K1 749 aa16.32■□□□□ 0.2
CLK3-204ENST00000483723 PRPF3O43395 683 aaKnown RBP16.32■□□□□ 0.2
CLK3-204ENST00000483723 PTGER2P43116 358 aa16.32■□□□□ 0.2
CLK3-204ENST00000483723 KRT40Q6A162 431 aa16.32■□□□□ 0.2
CLK3-204ENST00000483723 RSBN1LQ6PCB5 846 aaPredicted RBP16.32■□□□□ 0.2
CLK3-204ENST00000483723 LEO1Q8WVC0 666 aaPredicted RBP16.32■□□□□ 0.2
CLK3-204ENST00000483723 GJB4Q9NTQ9 266 aa16.32■□□□□ 0.2
CLK3-204ENST00000483723 RCOR1Q9UKL0 485 aa16.32■□□□□ 0.2
CLK3-204ENST00000483723 PCDHAC2Q9Y5I4 1007 aa16.32■□□□□ 0.2
CLK3-204ENST00000483723 KIF23Q02241 960 aaPredicted RBP16.31■□□□□ 0.2
CLK3-204ENST00000483723 PICALMQ13492 652 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 CAVIN1Q6NZI2 390 aaKnown RBP16.31■□□□□ 0.2
CLK3-204ENST00000483723 BRAPQ7Z569 592 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 ZNF396Q96N95 335 aaPredicted RBP16.31■□□□□ 0.2
CLK3-204ENST00000483723 EHD4Q9H223 541 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 TMEM63CQ9P1W3 806 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 SWAP70Q9UH65 585 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 ZNRF3Q9ULT6 936 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 MYH6P13533 1939 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 PLIN4Q96Q06 1357 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 SRCAPQ6ZRS2 3230 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 GUCY1A2P33402 732 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 ZNF445P59923 1031 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 NFIAQ12857 509 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 KAT14Q9H8E8 782 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 FAM198AQ9UFP1 575 aa16.31■□□□□ 0.2
CLK3-204ENST00000483723 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms