RNA–Protein interactions for RNA: ENST00000476635.5

PRKCI-202, Transcript of protein kinase C iota, humanhuman

TSL 1 (best)

Gene PRKCI, Length 3,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-202ENST00000476635 ZBTB43O43298 467 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 SHMT1P34896 483 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 CHAF1AQ13111 956 aaPredicted RBP7.54□□□□□ -1.2
PRKCI-202ENST00000476635 AOC3Q16853 763 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 RBM43Q6ZSC3 357 aaKnown RBP7.54□□□□□ -1.2
PRKCI-202ENST00000476635 TMTC3Q6ZXV5 915 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 FOXP4Q8IVH2 680 aaPredicted RBP7.54□□□□□ -1.2
PRKCI-202ENST00000476635 TEX11Q8IYF3 940 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 ZNF654Q8IZM8 581 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 CRACR2BQ8N4Y2 399 aaPredicted RBP7.54□□□□□ -1.2
PRKCI-202ENST00000476635 FBXO18Q8NFZ0 1043 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 TNFRSF25Q93038 417 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 SPZ1Q9BXG8 430 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 FSD2A1L4K1 749 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 CDK8P49336 464 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 HAND2P61296 217 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 TMEM67Q5HYA8 995 aa7.54□□□□□ -1.2
PRKCI-202ENST00000476635 TTF2Q9UNY4 1162 aaKnown RBP7.54□□□□□ -1.2
PRKCI-202ENST00000476635 PITPNM2Q9BZ72 1349 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 FRAT2O75474 233 aaPredicted RBP7.53□□□□□ -1.2
PRKCI-202ENST00000476635 PRELPP51888 382 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 PKN1Q16512 942 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 CSPP1Q1MSJ5 1256 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 SH3BP5LQ7L8J4 393 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 AMOTL1Q8IY63 956 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 FANCBQ8NB91 859 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 GMCL1P1Q8NEA9 526 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 SENP2Q9HC62 589 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 HERC5Q9UII4 1024 aaKnown RBP7.53□□□□□ -1.2
PRKCI-202ENST00000476635 DEXIO95424 95 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 USP17L8P0C7I0 530 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 METAP2P50579 478 aaKnown RBP eCLIP7.53□□□□□ -1.2
PRKCI-202ENST00000476635 PLCD1P51178 756 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 ZNF445P59923 1031 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 IQCA1Q86XH1 822 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 NECAB1Q8N987 351 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 DNAJC18Q9H819 358 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 NYAP2Q9P242 653 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 ESYT2A0FGR8 921 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 GOLGA8BA8MQT2 603 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 C21orf2O43822 256 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 MBD3O95983 291 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 ORC2Q13416 577 aaPredicted RBP7.53□□□□□ -1.2
PRKCI-202ENST00000476635 GALNT17Q6IS24 598 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 PPP1R18Q6NYC8 613 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 FAM151AQ8WW52 585 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 TAOK3Q9H2K8 898 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 FOXP1Q9H334 677 aaPredicted RBP7.53□□□□□ -1.2
PRKCI-202ENST00000476635 MAD2L2Q9UI95 211 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 RCOR1Q9UKL0 485 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 PPP2R3BQ9Y5P8 575 aa7.53□□□□□ -1.2
PRKCI-202ENST00000476635 LRRC37A2A6NM11 1700 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 IFIT3O14879 490 aaKnown RBP7.52□□□□□ -1.21
PRKCI-202ENST00000476635 PPIP5K2O43314 1243 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 CYP2D6P10635 497 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 GNAQP50148 359 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 NPY5RQ15761 445 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 CDC37L1Q7L3B6 337 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 TGFBRAP1Q8WUH2 860 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 PHF20Q9BVI0 1012 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 GPHNQ9NQX3 736 aaPredicted RBP7.52□□□□□ -1.21
PRKCI-202ENST00000476635 MCM9Q9NXL9 1143 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 RTEL1Q9NZ71 1219 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 SLC12A7Q9Y666 1083 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 JAK2O60674 1132 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 TNIP1Q15025 636 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 DEFB129Q9H1M3 183 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 RIOX1Q9H6W3 641 aa7.52□□□□□ -1.21
PRKCI-202ENST00000476635 CCDC69A6NI79 296 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 PSMD14O00487 310 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 YEATS4O95619 227 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 APPP05067 770 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 TOP1P11387 765 aaKnown RBP7.51□□□□□ -1.21
PRKCI-202ENST00000476635 USP5P45974 858 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 KIF23Q02241 960 aaPredicted RBP7.51□□□□□ -1.21
PRKCI-202ENST00000476635 GHRHRQ02643 423 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 RTN1Q16799 776 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 LARP1BQ659C4 914 aaKnown RBP7.51□□□□□ -1.21
PRKCI-202ENST00000476635 BTNL9Q6UXG8 535 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 SHISA4Q96DD7 197 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.51□□□□□ -1.21
PRKCI-202ENST00000476635 SSC5DA1L4H1 1573 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 ERICH2A1L162 156 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 DOK7Q18PE1 504 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 NIM1KQ8IY84 436 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 SCAND2PQ9GZW5 306 aaPredicted RBP7.51□□□□□ -1.21
PRKCI-202ENST00000476635 DBNDD1Q9H9R9 158 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 KCNQ5Q9NR82 932 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 MTMR4Q9NYA4 1195 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 PI4KBQ9UBF8 816 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 ZNF112Q9UJU3 913 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 A0A1W2PQ27 194 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 A0A1W2PQ64 194 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 A0A1W2PQD8 194 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 GOLGA8AA7E2F4 631 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 SMIM22K7EJ46 135 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 RIMBP2O15034 1052 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 MMP1P03956 469 aa7.51□□□□□ -1.21
PRKCI-202ENST00000476635 HSP90AA1P07900 732 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms