RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 EPB41L4AQ9HCS5 686 aaPredicted RBP16.71■□□□□ 0.27
FRMD4A-204ENST00000475141 CTNNA3Q9UI47 895 aa16.71■□□□□ 0.27
FRMD4A-204ENST00000475141 PALD1Q9ULE6 856 aa16.71■□□□□ 0.27
FRMD4A-204ENST00000475141 PDE4DIPQ5VU43 2346 aa16.7■□□□□ 0.26
FRMD4A-204ENST00000475141 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
FRMD4A-204ENST00000475141 USP17L21D6R901 530 aa16.7■□□□□ 0.26
FRMD4A-204ENST00000475141 ALX1Q15699 326 aa16.7■□□□□ 0.26
FRMD4A-204ENST00000475141 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
FRMD4A-204ENST00000475141 CRACR2BQ8N4Y2 399 aaPredicted RBP16.7■□□□□ 0.26
FRMD4A-204ENST00000475141 KIF12Q96FN5 646 aa16.7■□□□□ 0.26
FRMD4A-204ENST00000475141 PI4KBQ9UBF8 816 aa16.7■□□□□ 0.26
FRMD4A-204ENST00000475141 FZD1Q9UP38 647 aa16.7■□□□□ 0.26
FRMD4A-204ENST00000475141 DDTLA6NHG4 134 aaPredicted RBP16.69■□□□□ 0.26
FRMD4A-204ENST00000475141 SLC3A2P08195 630 aaKnown RBP16.69■□□□□ 0.26
FRMD4A-204ENST00000475141 SBK1Q52WX2 424 aa16.69■□□□□ 0.26
FRMD4A-204ENST00000475141 DCAF15Q66K64 600 aa16.69■□□□□ 0.26
FRMD4A-204ENST00000475141 CTR9Q6PD62 1173 aa16.69■□□□□ 0.26
FRMD4A-204ENST00000475141 TEPSINQ96N21 525 aa16.69■□□□□ 0.26
FRMD4A-204ENST00000475141 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 FOXP2O15409 715 aa16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 FGAP02671 866 aa16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 TM4SF4P48230 202 aa16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 IMMTQ16891 758 aaKnown RBP16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 NBPF12Q5TAG4 269 aaPredicted RBP16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 SH3BP5LQ7L8J4 393 aa16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 EHD4Q9H223 541 aa16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 R3HDMLQ9H3Y0 253 aa16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 HERC5Q9UII4 1024 aaKnown RBP16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 SERPINB13Q9UIV8 391 aa16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
FRMD4A-204ENST00000475141 GPR25O00155 361 aa16.67■□□□□ 0.26
FRMD4A-204ENST00000475141 PPP1R12BO60237 982 aaPredicted RBP16.67■□□□□ 0.26
FRMD4A-204ENST00000475141 PTH1RQ03431 593 aa16.67■□□□□ 0.26
FRMD4A-204ENST00000475141 C8orf34Q49A92 452 aa16.67■□□□□ 0.26
FRMD4A-204ENST00000475141 C12orf60Q5U649 245 aa16.67■□□□□ 0.26
FRMD4A-204ENST00000475141 CDAN1Q8IWY9 1227 aa16.67■□□□□ 0.26
FRMD4A-204ENST00000475141 LSG1Q9H089 658 aaKnown RBP16.67■□□□□ 0.26
FRMD4A-204ENST00000475141 TAOK2Q9UL54 1235 aa16.67■□□□□ 0.26
FRMD4A-204ENST00000475141 ANGEL1Q9UNK9 670 aaKnown RBP16.67■□□□□ 0.26
FRMD4A-204ENST00000475141 ZNF213O14771 459 aa16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 CYP2D6P10635 497 aa16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 PLCD1P51178 756 aa16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 PPARAQ07869 468 aa16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 ARMC9Q7Z3E5 817 aa16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 MAP4K1Q92918 833 aa16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 ZNF287Q9HBT7 754 aa16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 RBM8AQ9Y5S9 174 aaKnown RBP16.66■□□□□ 0.26
FRMD4A-204ENST00000475141 ROBO3Q96MS0 1386 aa16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 SSC5DA1L4H1 1573 aa16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 CYP2D7A0A087X1C5 515 aa16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 MAP3K13O43283 966 aa16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 EPB41L2O43491 1005 aaKnown RBP16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 PKN2Q16513 984 aaKnown RBP16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 RNF20Q5VTR2 975 aa16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 MIGA2Q7L4E1 593 aa16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 SIPA1L1O43166 1804 aa16.65■□□□□ 0.26
FRMD4A-204ENST00000475141 MYH8P13535 1937 aa16.64■□□□□ 0.26
FRMD4A-204ENST00000475141 TBC1D12O60347 775 aa16.64■□□□□ 0.25
FRMD4A-204ENST00000475141 MCCP23508 829 aa16.64■□□□□ 0.25
FRMD4A-204ENST00000475141 IREB2P48200 963 aaKnown RBP16.64■□□□□ 0.25
FRMD4A-204ENST00000475141 HAND2P61296 217 aa16.64■□□□□ 0.25
FRMD4A-204ENST00000475141 PDE4BQ07343 736 aa16.64■□□□□ 0.25
FRMD4A-204ENST00000475141 SREBF2Q12772 1141 aa16.64■□□□□ 0.25
FRMD4A-204ENST00000475141 LHX8Q68G74 356 aa16.64■□□□□ 0.25
FRMD4A-204ENST00000475141 ANAPC4Q9UJX5 808 aa16.64■□□□□ 0.25
FRMD4A-204ENST00000475141 FKTNO75072 461 aa16.63■□□□□ 0.25
FRMD4A-204ENST00000475141 SPRYD7Q5W111 196 aa16.63■□□□□ 0.25
FRMD4A-204ENST00000475141 C16orf86Q6ZW13 317 aa16.63■□□□□ 0.25
FRMD4A-204ENST00000475141 METTL16Q86W50 562 aaKnown RBP16.63■□□□□ 0.25
FRMD4A-204ENST00000475141 STK11IPQ8N1F8 1099 aa16.63■□□□□ 0.25
FRMD4A-204ENST00000475141 RNF41Q9H4P4 317 aaPredicted RBP16.63■□□□□ 0.25
FRMD4A-204ENST00000475141 UPF2Q9HAU5 1272 aaKnown RBP16.63■□□□□ 0.25
FRMD4A-204ENST00000475141 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
FRMD4A-204ENST00000475141 FAM196BA6NMK8 535 aa16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 PCP11498 1178 aaKnown RBP16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 CTDSPL2Q05D32 466 aa16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 GABPAQ06546 454 aa16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 LDLRAD1Q5T700 205 aa16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 FBXO46Q6PJ61 603 aaPredicted RBP16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 SLC10A4Q96EP9 437 aa16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 DYNLL2Q96FJ2 89 aa16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 WRNIP1Q96S55 665 aa16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 TOMM22Q9NS69 142 aa16.62■□□□□ 0.25
FRMD4A-204ENST00000475141 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
FRMD4A-204ENST00000475141 CDK8P49336 464 aa16.61■□□□□ 0.25
FRMD4A-204ENST00000475141 MAP3K10Q02779 954 aa16.61■□□□□ 0.25
FRMD4A-204ENST00000475141 AKNAD1Q5T1N1 836 aa16.61■□□□□ 0.25
FRMD4A-204ENST00000475141 PRPF38BQ5VTL8 546 aaKnown RBP16.61■□□□□ 0.25
FRMD4A-204ENST00000475141 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
FRMD4A-204ENST00000475141 SLC44A5Q8NCS7 719 aa16.61■□□□□ 0.25
FRMD4A-204ENST00000475141 CLMNQ96JQ2 1002 aa16.61■□□□□ 0.25
FRMD4A-204ENST00000475141 DNAJC18Q9H819 358 aa16.61■□□□□ 0.25
FRMD4A-204ENST00000475141 SLC27A2O14975 620 aa16.6■□□□□ 0.25
FRMD4A-204ENST00000475141 CYP21A2P08686 494 aa16.6■□□□□ 0.25
FRMD4A-204ENST00000475141 TRDNQ13061 729 aa16.6■□□□□ 0.25
FRMD4A-204ENST00000475141 NECTIN1Q15223 517 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms