RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZNF513Q8N8E2 541 aaPredicted RBP14.06□□□□□ -0.16
USP11-206ENST00000469080 CNBD1Q8NA66 436 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 SLC44A5Q8NCS7 719 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 GOLPH3LQ9H4A5 285 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 KIF28PB7ZC32 967 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 STX17P56962 302 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 C11orf57Q6ZUT1 292 aaPredicted RBP14.06□□□□□ -0.16
USP11-206ENST00000469080 TRMT1LQ7Z2T5 733 aaKnown RBP14.06□□□□□ -0.16
USP11-206ENST00000469080 AMIGO3Q86WK7 504 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 CARMIL3Q8ND23 1372 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 UFL1O94874 794 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 USP17L8P0C7I0 530 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 PNMA6AP0CW24 399 aaPredicted RBP14.05□□□□□ -0.16
USP11-206ENST00000469080 NFIXQ14938 502 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 IQCA1Q86XH1 822 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 ZNF34Q8IZ26 560 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 FBXO18Q8NFZ0 1043 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 TGFBRAP1Q8WUH2 860 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 ZSCAN16Q9H4T2 348 aaPredicted RBP14.05□□□□□ -0.16
USP11-206ENST00000469080 EPB41L4AQ9HCS5 686 aaPredicted RBP14.05□□□□□ -0.16
USP11-206ENST00000469080 MINPP1Q9UNW1 487 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 MROH5Q6ZUA9 1318 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 SLC3A2P08195 630 aaKnown RBP14.05□□□□□ -0.16
USP11-206ENST00000469080 FDPSP14324 419 aaKnown RBP14.05□□□□□ -0.16
USP11-206ENST00000469080 ERCC3P19447 782 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 CASP1P29466 404 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 ZNF174Q15697 407 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 DOK7Q18PE1 504 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 ERCC6LQ2NKX8 1250 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 PARP10Q53GL7 1025 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 SERPINC1P01008 464 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 PLA2G4AP47712 749 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 GOLGA8FQ08AF8 430 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 GOLGA8DPQ0D2H9 430 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 DIS3L2Q8IYB7 885 aaKnown RBP14.05□□□□□ -0.16
USP11-206ENST00000469080 FAM200AQ8TCP9 573 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 CPLX3Q8WVH0 158 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 MRPS27Q92552 414 aaKnown RBP14.05□□□□□ -0.16
USP11-206ENST00000469080 MAPK8IP1Q9UQF2 711 aa14.05□□□□□ -0.16
USP11-206ENST00000469080 TRPM3Q9HCF6 1732 aaPredicted RBP14.05□□□□□ -0.16
USP11-206ENST00000469080 SLIT3O75094 1523 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 TMCO3Q6UWJ1 677 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 RASGRP4Q8TDF6 673 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 PIK3R5Q8WYR1 880 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 GPR108Q9NPR9 543 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 DDX19AQ9NUU7 478 aaKnown RBP14.04□□□□□ -0.16
USP11-206ENST00000469080 SCP2P22307 547 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 PPARAQ07869 468 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 CNNM3Q8NE01 707 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 GOLGA5Q8TBA6 731 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 ERO1AQ96HE7 468 aa14.04□□□□□ -0.16
USP11-206ENST00000469080 FAM205CA6NFA0 338 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 NEBLO76041 1014 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 TNKSO95271 1327 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 SYKP43405 635 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 SCNN1DP51172 638 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 MYSM1Q5VVJ2 828 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 PPM1EQ8WY54 764 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 OAS2P29728 719 aaKnown RBP14.03□□□□□ -0.16
USP11-206ENST00000469080 EXOSC10Q01780 885 aaKnown RBP14.03□□□□□ -0.16
USP11-206ENST00000469080 IKQ13123 557 aaPredicted RBP14.03□□□□□ -0.16
USP11-206ENST00000469080 CCDC34Q96HJ3 373 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 GSG1L2A8MUP6 293 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 EIF3CLB5ME19 914 aaKnown RBP14.03□□□□□ -0.16
USP11-206ENST00000469080 MARCH6O60337 910 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 SLURP2P0DP57 97 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 CLCN6P51797 869 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 NLRP5P59047 1200 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 TRIM28Q13263 835 aaKnown RBP14.03□□□□□ -0.16
USP11-206ENST00000469080 PNOCQ13519 176 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 CERKQ8TCT0 537 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 ESR2Q92731 530 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 EIF3CQ99613 913 aaKnown RBP14.03□□□□□ -0.16
USP11-206ENST00000469080 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
USP11-206ENST00000469080 FAM53CQ9NYF3 392 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 FHOD1Q9Y613 1164 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 KIF1AQ12756 1690 aa14.03□□□□□ -0.16
USP11-206ENST00000469080 AP5Z1O43299 807 aa14.02□□□□□ -0.16
USP11-206ENST00000469080 CDKL5O76039 1030 aa14.02□□□□□ -0.16
USP11-206ENST00000469080 SLU7O95391 586 aaKnown RBP14.02□□□□□ -0.16
USP11-206ENST00000469080 PTPN14Q15678 1187 aa14.02□□□□□ -0.16
USP11-206ENST00000469080 CATIPQ7Z7H3 387 aa14.02□□□□□ -0.16
USP11-206ENST00000469080 TRMT44Q8IYL2 757 aaKnown RBP14.02□□□□□ -0.16
USP11-206ENST00000469080 SEPT12Q8IYM1 358 aa14.02□□□□□ -0.16
USP11-206ENST00000469080 GPKOWQ92917 476 aaPredicted RBP eCLIP14.02□□□□□ -0.16
USP11-206ENST00000469080 CACNA1FO60840 1977 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 NTSR2O95665 410 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 HSPA1LP34931 641 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 CFAP100Q494V2 611 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 MB21D2Q8IYB1 491 aaPredicted RBP14.02□□□□□ -0.17
USP11-206ENST00000469080 CEP57L1Q8IYX8 460 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 CCAR2Q8N163 923 aaKnown RBP14.02□□□□□ -0.17
USP11-206ENST00000469080 MICALL1Q8N3F8 863 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 GIMAP7Q8NHV1 300 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 OXER1Q8TDS5 423 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 DHX58Q96C10 678 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 ERVV-1B6SEH8 477 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 TCP10Q12799 353 aa14.02□□□□□ -0.17
USP11-206ENST00000469080 ANO1Q5XXA6 986 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms