RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 PRAMEF18Q5VWM3 479 aa13.99□□□□□ -0.17
RNF13-208ENST00000467996 DHX32Q7L7V1 743 aaKnown RBP13.99□□□□□ -0.17
RNF13-208ENST00000467996 KRT26Q7Z3Y9 468 aa13.99□□□□□ -0.17
RNF13-208ENST00000467996 TCEANC2Q96MN5 208 aa13.99□□□□□ -0.17
RNF13-208ENST00000467996 TTC14Q96N46 770 aa13.99□□□□□ -0.17
RNF13-208ENST00000467996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.99□□□□□ -0.17
RNF13-208ENST00000467996 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
RNF13-208ENST00000467996 RBM19Q9Y4C8 960 aaKnown RBP13.99□□□□□ -0.17
RNF13-208ENST00000467996 TRPM7Q96QT4 1865 aa13.99□□□□□ -0.17
RNF13-208ENST00000467996 PLIN4Q96Q06 1357 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 WDR19Q8NEZ3 1342 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 TSPY2A6NKD2 308 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 PRC1O43663 620 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 TBC1D12O60347 775 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 MCM5P33992 734 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 NT5C2P49902 561 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 EXOSC10Q01780 885 aaKnown RBP13.98□□□□□ -0.17
RNF13-208ENST00000467996 FAM47AQ5JRC9 791 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 TATDN1Q6P1N9 297 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 CHST3Q7LGC8 479 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 LDHDQ86WU2 507 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 GLIS2Q9BZE0 524 aaPredicted RBP13.98□□□□□ -0.17
RNF13-208ENST00000467996 PDRG1Q9NUG6 133 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 ZSWIM5Q9P217 1185 aa13.98□□□□□ -0.17
RNF13-208ENST00000467996 AKR1B1P15121 316 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 TFAP4Q01664 338 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 MAP3K10Q02779 954 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 MAP1SQ66K74 1059 aaPredicted RBP13.97□□□□□ -0.17
RNF13-208ENST00000467996 DLK2Q6UY11 383 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 CDC37L1Q7L3B6 337 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 MIGA2Q7L4E1 593 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 USP48Q86UV5 1035 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 ZNF444Q8N0Y2 327 aaPredicted RBP13.97□□□□□ -0.17
RNF13-208ENST00000467996 HOOK2Q96ED9 719 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 LRRC2Q9BYS8 371 aa13.97□□□□□ -0.17
RNF13-208ENST00000467996 ST18O60284 1047 aa13.96□□□□□ -0.17
RNF13-208ENST00000467996 CD2BP2O95400 341 aaKnown RBP13.96□□□□□ -0.17
RNF13-208ENST00000467996 TSPY3P0CV98 308 aa13.96□□□□□ -0.17
RNF13-208ENST00000467996 TSPY8P0CW00 308 aa13.96□□□□□ -0.17
RNF13-208ENST00000467996 DSG3P32926 999 aa13.96□□□□□ -0.17
RNF13-208ENST00000467996 AK2P54819 239 aa13.96□□□□□ -0.17
RNF13-208ENST00000467996 SUPT20HL1Q3ZLR7 823 aa13.96□□□□□ -0.17
RNF13-208ENST00000467996 CERKLQ49MI3 558 aaPredicted RBP13.96□□□□□ -0.17
RNF13-208ENST00000467996 DCAF15Q66K64 600 aa13.96□□□□□ -0.17
RNF13-208ENST00000467996 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
RNF13-208ENST00000467996 GPBP1L1Q9HC44 474 aaPredicted RBP13.96□□□□□ -0.17
RNF13-208ENST00000467996 PHIPQ8WWQ0 1821 aa13.96□□□□□ -0.17
RNF13-208ENST00000467996 TNKSO95271 1327 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 SH2B2O14492 632 aaPredicted RBP13.95□□□□□ -0.18
RNF13-208ENST00000467996 NMT2O60551 498 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 GDF11O95390 407 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 TOB2Q14106 344 aaPredicted RBP13.95□□□□□ -0.18
RNF13-208ENST00000467996 RRP1BQ14684 758 aaKnown RBP13.95□□□□□ -0.18
RNF13-208ENST00000467996 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
RNF13-208ENST00000467996 Q6ZUG5 572 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 IQCA1Q86XH1 822 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 IL27Q8NEV9 243 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 NEDD1Q8NHV4 660 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 TMEM87BQ96K49 555 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 CCDC17Q96LX7 622 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 UBAC1Q9BSL1 405 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 MTA3Q9BTC8 594 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 ZNF341Q9BYN7 854 aa13.95□□□□□ -0.18
RNF13-208ENST00000467996 ALDH8A1Q9H2A2 487 aaPredicted RBP13.95□□□□□ -0.18
RNF13-208ENST00000467996 PHF20L1A8MW92 1017 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 MPHOSPH10O00566 681 aaKnown RBP13.94□□□□□ -0.18
RNF13-208ENST00000467996 IFIT3O14879 490 aaKnown RBP13.94□□□□□ -0.18
RNF13-208ENST00000467996 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
RNF13-208ENST00000467996 SART3Q15020 963 aaKnown RBP13.94□□□□□ -0.18
RNF13-208ENST00000467996 SEC23AQ15436 765 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 ABCB5Q2M3G0 1257 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 TMEM67Q5HYA8 995 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 FBXL16Q8N461 479 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 IGDCC4Q8TDY8 1250 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 ZSCAN10Q96SZ4 725 aaPredicted RBP13.94□□□□□ -0.18
RNF13-208ENST00000467996 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.94□□□□□ -0.18
RNF13-208ENST00000467996 AGXT2Q9BYV1 514 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 LY9Q9HBG7 655 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 GPHNQ9NQX3 736 aaPredicted RBP13.94□□□□□ -0.18
RNF13-208ENST00000467996 IL17RBQ9NRM6 502 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 FZD1Q9UP38 647 aa13.94□□□□□ -0.18
RNF13-208ENST00000467996 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 ERICH2A1L162 156 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 TRAF5O00463 557 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 KIF3CO14782 793 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 NF2P35240 595 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 JAG1P78504 1218 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 FGD1P98174 961 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 WTAPQ15007 396 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 ANKRD1Q15327 319 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 CHADLQ6NUI6 762 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 TMEM179Q6ZVK1 233 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
RNF13-208ENST00000467996 ENAHQ8N8S7 591 aaPredicted RBP13.93□□□□□ -0.18
RNF13-208ENST00000467996 BRF1Q92994 677 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 SNX21Q969T3 373 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 ZNF112Q9UJU3 913 aa13.93□□□□□ -0.18
RNF13-208ENST00000467996 ANGEL1Q9UNK9 670 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms