RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
COL6A1-202ENST00000463060 NEDD1Q8NHV4 660 aa16.94■□□□□ 0.3
COL6A1-202ENST00000463060 TCP11L1Q9NUJ3 509 aa16.94■□□□□ 0.3
COL6A1-202ENST00000463060 SSC5DA1L4H1 1573 aa16.94■□□□□ 0.3
COL6A1-202ENST00000463060 IGKV6D-41A0A0C4DH26 115 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
COL6A1-202ENST00000463060 JAG1P78504 1218 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 TFAP4Q01664 338 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 TOB2Q14106 344 aaPredicted RBP16.93■□□□□ 0.3
COL6A1-202ENST00000463060 SEC23AQ15436 765 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 FAM47AQ5JRC9 791 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 RRP12Q5JTH9 1297 aaKnown RBP16.93■□□□□ 0.3
COL6A1-202ENST00000463060 CHST3Q7LGC8 479 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 USP48Q86UV5 1035 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 LDHDQ86WU2 507 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 CRACR2BQ8N4Y2 399 aaPredicted RBP16.93■□□□□ 0.3
COL6A1-202ENST00000463060 SNX21Q969T3 373 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 CCDC17Q96LX7 622 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.93■□□□□ 0.3
COL6A1-202ENST00000463060 PDRG1Q9NUG6 133 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 ZNF112Q9UJU3 913 aa16.93■□□□□ 0.3
COL6A1-202ENST00000463060 PLIN4Q96Q06 1357 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 AKR1B1P15121 316 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 EVCP57679 992 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 SUPT20HL1Q3ZLR7 823 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 RCSD1Q6JBY9 416 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 MIGA2Q7L4E1 593 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
COL6A1-202ENST00000463060 ANKS1AQ92625 1134 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 HOOK2Q96ED9 719 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 TMEM87BQ96K49 555 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 GLIS2Q9BZE0 524 aaPredicted RBP16.92■□□□□ 0.3
COL6A1-202ENST00000463060 GPHNQ9NQX3 736 aaPredicted RBP16.92■□□□□ 0.3
COL6A1-202ENST00000463060 IL17RBQ9NRM6 502 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
COL6A1-202ENST00000463060 GREB1LQ9C091 1923 aaPredicted RBP16.92■□□□□ 0.3
COL6A1-202ENST00000463060 SH2B2O14492 632 aaPredicted RBP16.91■□□□□ 0.3
COL6A1-202ENST00000463060 AK2P54819 239 aa16.91■□□□□ 0.3
COL6A1-202ENST00000463060 CERKLQ49MI3 558 aaPredicted RBP16.91■□□□□ 0.3
COL6A1-202ENST00000463060 Q6ZUG5 572 aa16.91■□□□□ 0.3
COL6A1-202ENST00000463060 LRRC2Q9BYS8 371 aa16.91■□□□□ 0.3
COL6A1-202ENST00000463060 TSPY2A6NKD2 308 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 NMT2O60551 498 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 USP2O75604 605 aaPredicted RBP16.9■□□□□ 0.3
COL6A1-202ENST00000463060 GUCY1A2P33402 732 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 LIFRP42702 1097 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 SHROOM1Q2M3G4 852 aaPredicted RBP16.9■□□□□ 0.3
COL6A1-202ENST00000463060 DCAF15Q66K64 600 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
COL6A1-202ENST00000463060 ENAHQ8N8S7 591 aaPredicted RBP16.9■□□□□ 0.3
COL6A1-202ENST00000463060 CDCA5Q96FF9 252 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 ZSCAN10Q96SZ4 725 aaPredicted RBP16.9■□□□□ 0.3
COL6A1-202ENST00000463060 LY9Q9HBG7 655 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 SENP2Q9HC62 589 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 CLEC11AQ9Y240 323 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 MYH8P13535 1937 aa16.9■□□□□ 0.3
COL6A1-202ENST00000463060 KIF3CO14782 793 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
COL6A1-202ENST00000463060 ST18O60284 1047 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 TSPY3P0CV98 308 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 TSPY8P0CW00 308 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 CAP2P40123 477 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 SGMS1Q86VZ5 419 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 DGKHQ86XP1 1220 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 SIAH1Q8IUQ4 282 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 ZKSCAN3Q9BRR0 538 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 ZNF341Q9BYN7 854 aa16.89■□□□□ 0.29
COL6A1-202ENST00000463060 ANGEL1Q9UNK9 670 aaKnown RBP16.89■□□□□ 0.29
COL6A1-202ENST00000463060 ITGBL1O95965 494 aaPredicted RBP16.88■□□□□ 0.29
COL6A1-202ENST00000463060 ABCB5Q2M3G0 1257 aa16.88■□□□□ 0.29
COL6A1-202ENST00000463060 CCDC178Q5BJE1 867 aa16.88■□□□□ 0.29
COL6A1-202ENST00000463060 TMEM67Q5HYA8 995 aa16.88■□□□□ 0.29
COL6A1-202ENST00000463060 IQCA1Q86XH1 822 aa16.88■□□□□ 0.29
COL6A1-202ENST00000463060 BRF1Q92994 677 aa16.88■□□□□ 0.29
COL6A1-202ENST00000463060 KLRG1Q96E93 195 aa16.88■□□□□ 0.29
COL6A1-202ENST00000463060 MTMR4Q9NYA4 1195 aa16.88■□□□□ 0.29
COL6A1-202ENST00000463060 BRPF3Q9ULD4 1205 aa16.88■□□□□ 0.29
COL6A1-202ENST00000463060 TNKSO95271 1327 aa16.88■□□□□ 0.29
COL6A1-202ENST00000463060 GDF11O95390 407 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 MCM2P49736 904 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 ANKRD1Q15327 319 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 MAP3K11Q16584 847 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 TMEM179Q6ZVK1 233 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 TMTC2Q8N394 836 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 CEP95Q96GE4 821 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 UBAC1Q9BSL1 405 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 TBC1D2Q9BYX2 928 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
COL6A1-202ENST00000463060 GINM1Q9NU53 330 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 TPCN1Q9ULQ1 816 aa16.87■□□□□ 0.29
COL6A1-202ENST00000463060 TRAF5O00463 557 aa16.86■□□□□ 0.29
COL6A1-202ENST00000463060 CTNND1O60716 968 aaKnown RBP16.86■□□□□ 0.29
COL6A1-202ENST00000463060 GH2P01242 217 aa16.86■□□□□ 0.29
COL6A1-202ENST00000463060 INPP5BP32019 993 aa16.86■□□□□ 0.29
COL6A1-202ENST00000463060 FMR1Q06787 632 aaKnown RBP eCLIP16.86■□□□□ 0.29
COL6A1-202ENST00000463060 SEPT2Q15019 361 aa16.86■□□□□ 0.29
COL6A1-202ENST00000463060 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms