RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 KRT23Q9C075 422 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 DCP1AQ9NPI6 582 aaPredicted RBP9.67□□□□□ -0.86
RPA3-205ENST00000462723 ANAPC4Q9UJX5 808 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 NAV1Q8NEY1 1877 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 CDK5RAP2Q96SN8 1893 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 LAMB1P07942 1786 aa9.67□□□□□ -0.86
RPA3-205ENST00000462723 WDR19Q8NEZ3 1342 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 USP17L21D6R901 530 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 RAD17O75943 681 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 VIL1P09327 827 aaKnown RBP9.66□□□□□ -0.86
RPA3-205ENST00000462723 PCP11498 1178 aaKnown RBP9.66□□□□□ -0.86
RPA3-205ENST00000462723 CRKP46108 304 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 CTDSPL2Q05D32 466 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 TNIP1Q15025 636 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 SBK1Q52WX2 424 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 CTR9Q6PD62 1173 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 LAPTM4BQ86VI4 370 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 TGFBRAP1Q8WUH2 860 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 STAG1Q8WVM7 1258 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 TMX3Q96JJ7 454 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 ZDHHC15Q96MV8 337 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 SH2B1Q9NRF2 756 aaPredicted RBP9.66□□□□□ -0.86
RPA3-205ENST00000462723 MCM9Q9NXL9 1143 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 SERPINA10Q9UK55 444 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 COL4A5P29400 1685 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 FOCADQ5VW36 1801 aa9.66□□□□□ -0.86
RPA3-205ENST00000462723 PPP1R3GB7ZBB8 358 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 PSMD14O00487 310 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 PRC1O43663 620 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 RBM5P52756 815 aaKnown RBP eCLIP9.65□□□□□ -0.86
RPA3-205ENST00000462723 RHBDL3P58872 404 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 EXOSC10Q01780 885 aaKnown RBP9.65□□□□□ -0.86
RPA3-205ENST00000462723 PROX2Q3B8N5 592 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 CIAPIN1Q6FI81 312 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 Q6ZUG5 572 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 MAPKAPK5Q8IW41 473 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 MB21D2Q8IYB1 491 aaPredicted RBP9.65□□□□□ -0.86
RPA3-205ENST00000462723 OGFOD1Q8N543 542 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 AGBL3Q8NEM8 1001 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 TCEANC2Q96MN5 208 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 SYT17Q9BSW7 474 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 TOMM22Q9NS69 142 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 USP40Q9NVE5 1235 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 HDAC9Q9UKV0 1011 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 ECM29Q5VYK3 1845 aa9.65□□□□□ -0.86
RPA3-205ENST00000462723 ADAMTSL1Q8N6G6 1762 aa9.65□□□□□ -0.87
RPA3-205ENST00000462723 MYH1P12882 1939 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 NEDD4P46934 1319 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 CYP2D7A0A087X1C5 515 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 B4E1Z4 1266 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 POLR3DP05423 398 aaPredicted RBP9.64□□□□□ -0.87
RPA3-205ENST00000462723 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 NT5C2P49902 561 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 MMP14P50281 582 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 RASSF7Q02833 373 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 CXCL9Q07325 125 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 PDE4BQ07343 736 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 CUL4AQ13619 759 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 TOB2Q14106 344 aaPredicted RBP9.64□□□□□ -0.87
RPA3-205ENST00000462723 RRP12Q5JTH9 1297 aaKnown RBP9.64□□□□□ -0.87
RPA3-205ENST00000462723 C12orf60Q5U649 245 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 APOBEC3HQ6NTF7 200 aaKnown RBP9.64□□□□□ -0.87
RPA3-205ENST00000462723 ARHGAP27Q6ZUM4 889 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 FBXL16Q8N461 479 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 ESR2Q92731 530 aa9.64□□□□□ -0.87
RPA3-205ENST00000462723 ZNF775Q96BV0 537 aaPredicted RBP9.64□□□□□ -0.87
RPA3-205ENST00000462723 INTS4Q96HW7 963 aaKnown RBP9.64□□□□□ -0.87
RPA3-205ENST00000462723 SLKQ9H2G2 1235 aaPredicted RBP9.64□□□□□ -0.87
RPA3-205ENST00000462723 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
RPA3-205ENST00000462723 FLT1P17948 1338 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 DDX60LQ5H9U9 1706 aaKnown RBP9.63□□□□□ -0.87
RPA3-205ENST00000462723 ORC4O43929 436 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 KDM4AO75164 1064 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 EIF6P56537 245 aaKnown RBP9.63□□□□□ -0.87
RPA3-205ENST00000462723 COL9A3Q14050 684 aaPredicted RBP9.63□□□□□ -0.87
RPA3-205ENST00000462723 SART3Q15020 963 aaKnown RBP9.63□□□□□ -0.87
RPA3-205ENST00000462723 CDC42EP5Q6NZY7 148 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 CHST3Q7LGC8 479 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 BRF1Q92994 677 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 CHMP4CQ96CF2 233 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 TMEM87BQ96K49 555 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 ZFRQ96KR1 1074 aaKnown RBP9.63□□□□□ -0.87
RPA3-205ENST00000462723 GMLQ99445 158 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 MTA3Q9BTC8 594 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 LRRC2Q9BYS8 371 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 AGXT2Q9BYV1 514 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 ZNF287Q9HBT7 754 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 CWC22Q9HCG8 908 aaKnown RBP9.63□□□□□ -0.87
RPA3-205ENST00000462723 SAP30BPQ9UHR5 308 aaKnown RBP9.63□□□□□ -0.87
RPA3-205ENST00000462723 TPCN1Q9ULQ1 816 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.63□□□□□ -0.87
RPA3-205ENST00000462723 ROBO3Q96MS0 1386 aa9.63□□□□□ -0.87
RPA3-205ENST00000462723 DICER1Q9UPY3 1922 aaKnown RBP9.62□□□□□ -0.87
RPA3-205ENST00000462723 ERICH2A1L162 156 aa9.62□□□□□ -0.87
RPA3-205ENST00000462723 EVI5O60447 810 aa9.62□□□□□ -0.87
RPA3-205ENST00000462723 RANBP6O60518 1105 aaKnown RBP9.62□□□□□ -0.87
RPA3-205ENST00000462723 WDHD1O75717 1129 aaPredicted RBP9.62□□□□□ -0.87
RPA3-205ENST00000462723 FGRP09769 529 aa9.62□□□□□ -0.87
RPA3-205ENST00000462723 CYP2D6P10635 497 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms