RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 CD320Q9NPF0 282 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 OGDHLQ9ULD0 1010 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 FAM208BQ5VWN6 2430 aa7.21□□□□□ -1.26
SBDSP1-204ENST00000453858 ERVV-1B6SEH8 477 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 BTBD19C9JJ37 291 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 PPP1R12BO60237 982 aaPredicted RBP7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 SLC19A1P41440 591 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 GTF2A2P52657 109 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 TRIM32Q13049 653 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 COL9A2Q14055 689 aaPredicted RBP7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 SH3BP5LQ7L8J4 393 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 PODNQ7Z5L7 613 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 TTC5Q8N0Z6 440 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 BAP1Q92560 729 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 EMID1Q96A84 441 aaPredicted RBP7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 ARHGAP9Q9BRR9 750 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 NBEAQ8NFP9 2946 aa7.2□□□□□ -1.26
SBDSP1-204ENST00000453858 GPSM2P81274 684 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 PRR20EP86478 221 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 PRR20CP86479 221 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 PRR20DP86480 221 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 PRR20BP86481 221 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 PRR20AP86496 221 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 GRAPQ13588 217 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 SULT6B1Q6IMI4 303 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 ZBTB33Q86T24 672 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 ZNF598Q86UK7 904 aaKnown RBP7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 ANKRD13AQ8IZ07 590 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 IL17REQ8NFR9 667 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 TBC1D16Q8TBP0 767 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 GRAPLQ8TC17 118 aaPredicted RBP7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 ANKS1AQ92625 1134 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 ZNF576Q9H609 170 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 CPA4Q9UI42 421 aa7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 CDV3Q9UKY7 258 aaKnown RBP7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 NSFL1CQ9UNZ2 370 aaKnown RBP7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 SMG1Q96Q15 3661 aaKnown RBP7.19□□□□□ -1.26
SBDSP1-204ENST00000453858 FBXO45P0C2W1 286 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 VARSP26640 1264 aaKnown RBP7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 FLT3LGP49771 235 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 SH3BP2P78314 561 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 SEMA3FQ13275 785 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 AGERQ15109 404 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 CCDC85BQ15834 202 aaPredicted RBP7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 PLA2G2CQ5R387 149 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 TRIM67Q6ZTA4 783 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 TMC4Q7Z404 712 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 SH3RF1Q7Z6J0 888 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 APOBEC3FQ8IUX4 373 aaKnown RBP7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 LBHD1Q9BQE6 289 aaPredicted RBP7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 ELP3Q9H9T3 547 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 LRRC37AA6NMS7 1700 aa7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 DDX60LQ5H9U9 1706 aaKnown RBP7.18□□□□□ -1.26
SBDSP1-204ENST00000453858 SASH1O94885 1247 aa7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 BCRP11274 1271 aa7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 GPTP24298 496 aa7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 IREB2P48200 963 aaKnown RBP7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 VAC14Q08AM6 782 aa7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 MTHFSDQ2M296 383 aaKnown RBP7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 NBPF12Q5TAG4 269 aaPredicted RBP7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 LIAT1Q6ZQX7 453 aa7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 ZBTB38Q8NAP3 1195 aaPredicted RBP7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 MXD3Q9BW11 206 aa7.17□□□□□ -1.26
SBDSP1-204ENST00000453858 BRWD1Q9NSI6 2320 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 KIF20BQ96Q89 1820 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 USP17L3A6NCW0 530 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 USP17L4A6NCW7 530 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 ERC2O15083 957 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 U2AF1L5P0DN76 240 aaPredicted RBP7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 U2AF1Q01081 240 aaKnown RBP eCLIP7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 DACT2Q5SW24 774 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 USP17L1Q7RTZ2 530 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 TRMT44Q8IYL2 757 aaKnown RBP7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 FAM174AQ8TBP5 190 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 CALR3Q96L12 384 aaKnown RBP7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 EYA3Q99504 573 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 ZC3H12CQ9C0D7 883 aaKnown RBP7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 ALG2Q9H553 416 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 SERPINA10Q9UK55 444 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 DOCK3Q8IZD9 2030 aa7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 COL1A1P02452 1464 aaPredicted RBP7.16□□□□□ -1.26
SBDSP1-204ENST00000453858 LAMB2P55268 1798 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 NUP98P52948 1817 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 PSME4Q14997 1843 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 CETPP11597 493 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 IL13P35225 146 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 MMP14P50281 582 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 AAK1Q2M2I8 961 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 SUPT20HL1Q3ZLR7 823 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 LINC01559Q495D7 138 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 DDX46Q7L014 1031 aaKnown RBP7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 ADAM32Q8TC27 787 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 C1QTNF2Q9BXJ5 285 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 PRDM12Q9H4Q4 367 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 PODXL2Q9NZ53 605 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 DACH1Q9UI36 760 aa7.15□□□□□ -1.26
SBDSP1-204ENST00000453858 MAP3K15Q6ZN16 1313 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms