RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 MIGA1Q8NAN2 632 aa18.98■□□□□ 0.63
TRA2A-203ENST00000448549 MORF4L1Q9UBU8 362 aa18.98■□□□□ 0.63
TRA2A-203ENST00000448549 ZBTB21Q9ULJ3 1066 aa18.98■□□□□ 0.63
TRA2A-203ENST00000448549 NR2E3Q9Y5X4 410 aa18.98■□□□□ 0.63
TRA2A-203ENST00000448549 NDUFB9Q9Y6M9 179 aa18.98■□□□□ 0.63
TRA2A-203ENST00000448549 C19orf81C9J6K1 198 aa18.97■□□□□ 0.63
TRA2A-203ENST00000448549 USP17L10C9JJH3 530 aa18.97■□□□□ 0.63
TRA2A-203ENST00000448549 HLA-DOAP06340 250 aa18.97■□□□□ 0.63
TRA2A-203ENST00000448549 HOXA7P31268 230 aaPredicted RBP18.97■□□□□ 0.63
TRA2A-203ENST00000448549 CRISPLD2Q9H0B8 497 aa18.97■□□□□ 0.63
TRA2A-203ENST00000448549 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.97■□□□□ 0.633e-9■■□□□ 13.6
TRA2A-203ENST00000448549 PTPRFP10586 1907 aa18.96■□□□□ 0.63
TRA2A-203ENST00000448549 HMGCRP04035 888 aa18.96■□□□□ 0.63
TRA2A-203ENST00000448549 CAPN2P17655 700 aa18.96■□□□□ 0.63
TRA2A-203ENST00000448549 TRIM32Q13049 653 aa18.96■□□□□ 0.63
TRA2A-203ENST00000448549 CEP85Q6P2H3 762 aa18.96■□□□□ 0.63
TRA2A-203ENST00000448549 MAGEB6Q8N7X4 407 aa18.96■□□□□ 0.63
TRA2A-203ENST00000448549 PAWRQ96IZ0 340 aaKnown RBP18.96■□□□□ 0.63
TRA2A-203ENST00000448549 TXNRD2Q9NNW7 524 aa18.96■□□□□ 0.63
TRA2A-203ENST00000448549 GINM1Q9NU53 330 aa18.96■□□□□ 0.63
TRA2A-203ENST00000448549 EVI5O60447 810 aa18.95■□□□□ 0.62
TRA2A-203ENST00000448549 HERVK_113P62684 666 aa18.95■□□□□ 0.62
TRA2A-203ENST00000448549 MIER1Q8N108 512 aa18.95■□□□□ 0.62
TRA2A-203ENST00000448549 GPRC5AQ8NFJ5 357 aa18.95■□□□□ 0.62
TRA2A-203ENST00000448549 ANTXR1Q9H6X2 564 aa18.95■□□□□ 0.62
TRA2A-203ENST00000448549 EMILIN3Q9NT22 766 aa18.95■□□□□ 0.62
TRA2A-203ENST00000448549 EXOC6BQ9Y2D4 811 aa18.95■□□□□ 0.62
TRA2A-203ENST00000448549 MGAMO43451 1857 aa18.94■□□□□ 0.62
TRA2A-203ENST00000448549 GH2P01242 217 aa18.94■□□□□ 0.62
TRA2A-203ENST00000448549 CYP2B6P20813 491 aa18.94■□□□□ 0.62
TRA2A-203ENST00000448549 USP5P45974 858 aa18.94■□□□□ 0.62
TRA2A-203ENST00000448549 AACSQ86V21 672 aa18.94■□□□□ 0.62
TRA2A-203ENST00000448549 DIS3LQ8TF46 1054 aaKnown RBP18.94■□□□□ 0.62
TRA2A-203ENST00000448549 RBPJLQ9UBG7 517 aa18.94■□□□□ 0.62
TRA2A-203ENST00000448549 LOC285556D6RIA3 1793 aa18.93■□□□□ 0.62
TRA2A-203ENST00000448549 PANK1Q8TE04 598 aa18.93■□□□□ 0.62
TRA2A-203ENST00000448549 TRIB2Q92519 343 aa18.93■□□□□ 0.62
TRA2A-203ENST00000448549 PRO3102Q9H379 93 aa18.93■□□□□ 0.62
TRA2A-203ENST00000448549 HMX1Q9NP08 348 aaPredicted RBP18.93■□□□□ 0.62
TRA2A-203ENST00000448549 RPTORQ8N122 1335 aa18.93■□□□□ 0.62
TRA2A-203ENST00000448549 MAST2Q6P0Q8 1798 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 MAP3K12Q12852 859 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 Q3C1V9 767 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 TATDN1Q6P1N9 297 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 USP17L2Q6R6M4 530 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 POTEEQ6S8J3 1075 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 NECAB2Q7Z6G3 386 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 CERS3Q8IU89 383 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 ERC1Q8IUD2 1116 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 SERPINB13Q9UIV8 391 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 SIPA1L1O43166 1804 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 CEP290O15078 2479 aa18.92■□□□□ 0.62
TRA2A-203ENST00000448549 ZYXQ15942 572 aaKnown RBP18.91■□□□□ 0.62
TRA2A-203ENST00000448549 NUDT12Q9BQG2 462 aa18.91■□□□□ 0.62
TRA2A-203ENST00000448549 PAGR1Q9BTK6 254 aa18.91■□□□□ 0.62
TRA2A-203ENST00000448549 PORCNQ9H237 461 aa18.91■□□□□ 0.62
TRA2A-203ENST00000448549 IL1RAPL2Q9NP60 686 aa18.91■□□□□ 0.62
TRA2A-203ENST00000448549 MAPK4P31152 587 aa18.9■□□□□ 0.62
TRA2A-203ENST00000448549 ERVK-9P63128 1117 aa18.9■□□□□ 0.62
TRA2A-203ENST00000448549 ERVK-24P63145 666 aa18.9■□□□□ 0.62
TRA2A-203ENST00000448549 RAB3GAP1Q15042 981 aa18.9■□□□□ 0.62
TRA2A-203ENST00000448549 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
TRA2A-203ENST00000448549 CCAR1Q8IX12 1150 aaKnown RBP18.9■□□□□ 0.62
TRA2A-203ENST00000448549 ANKLE1Q8NAG6 615 aa18.9■□□□□ 0.62
TRA2A-203ENST00000448549 SOCS4Q8WXH5 440 aa18.9■□□□□ 0.62
TRA2A-203ENST00000448549 FEZ1Q99689 392 aa18.9■□□□□ 0.62
TRA2A-203ENST00000448549 EHD4Q9H223 541 aa18.9■□□□□ 0.62
TRA2A-203ENST00000448549 XRCC5P13010 732 aaKnown RBP18.89■□□□□ 0.61
TRA2A-203ENST00000448549 PRKAR2AP13861 404 aaKnown RBP18.89■□□□□ 0.61
TRA2A-203ENST00000448549 PDE3AQ14432 1141 aa18.89■□□□□ 0.61
TRA2A-203ENST00000448549 CERKLQ49MI3 558 aaPredicted RBP18.89■□□□□ 0.61
TRA2A-203ENST00000448549 MAP3K21Q5TCX8 1036 aa18.89■□□□□ 0.61
TRA2A-203ENST00000448549 RIOK1Q9BRS2 568 aaKnown RBP18.89■□□□□ 0.61
TRA2A-203ENST00000448549 TRIOBPQ9H2D6 2365 aa18.89■□□□□ 0.61
TRA2A-203ENST00000448549 ATAD5Q96QE3 1844 aa18.88■□□□□ 0.61
TRA2A-203ENST00000448549 MNX1P50219 401 aaPredicted RBP18.88■□□□□ 0.61
TRA2A-203ENST00000448549 PLCD1P51178 756 aa18.88■□□□□ 0.61
TRA2A-203ENST00000448549 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
TRA2A-203ENST00000448549 TMED8Q6PL24 325 aaPredicted RBP18.88■□□□□ 0.61
TRA2A-203ENST00000448549 GPR142Q7Z601 462 aa18.88■□□□□ 0.61
TRA2A-203ENST00000448549 RHPN1Q8TCX5 695 aa18.88■□□□□ 0.61
TRA2A-203ENST00000448549 GTF3C2Q8WUA4 911 aaPredicted RBP18.88■□□□□ 0.61
TRA2A-203ENST00000448549 USP6NLQ92738 828 aa18.88■□□□□ 0.61
TRA2A-203ENST00000448549 C12orf42Q96LP6 360 aa18.88■□□□□ 0.61
TRA2A-203ENST00000448549 NBPF3Q9H094 633 aa18.88■□□□□ 0.61
TRA2A-203ENST00000448549 STAP2Q9UGK3 403 aa18.88■□□□□ 0.61
TRA2A-203ENST00000448549 MAGEB6P1A0A0J9YX57 407 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 USP17L15C9J2P7 530 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 USP17L13C9JLJ4 530 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 USP17L11C9JVI0 530 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 USP17L18D6R9N7 530 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 USP17L22D6RA61 530 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 USP17L17D6RBQ6 530 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 USP17L19D6RCP7 530 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 USP17L20D6RJB6 530 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 APBB1O00213 710 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 ZKSCAN1P17029 563 aaPredicted RBP18.87■□□□□ 0.61
TRA2A-203ENST00000448549 USP17L24Q0WX57 530 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 HSP90AB4PQ58FF6 505 aa18.87■□□□□ 0.61
TRA2A-203ENST00000448549 MORN1Q5T089 497 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms